Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G26470 Arabidopsis thaliana HOM05D006769 ORTHO05D008522 7.7e-283 976.5 488 100.0
AL4G19290 Arabidopsis lyrata HOM05D006769 ORTHO05D008522 1.2e-235 819.7 497 85.1
Carub.0004s0653 Capsella rubella HOM05D006769 ORTHO05D008522 4.9e-205 718.0 553 70.7
Sp6g10380 Schrenkiella parvula HOM05D006769 ORTHO05D008522 2.1e-203 712.6 498 75.1
CARHR294500 Cardamine hirsuta HOM05D006769 ORTHO05D008522 6.4e-197 691.0 498 74.3
Carub.0004s0639 Capsella rubella HOM05D006769 ORTHO05D008522 2.5e-193 679.1 553 68.7
Thhalv10003450m.g Eutrema salsugineum HOM05D006769 ORTHO05D008522 6.9e-191 671.0 499 72.5
Aa31LG5G9400 Aethionema arabicum HOM05D006769 ORTHO05D008522 2.8e-184 649.0 498 68.7
BcaB08g35324 Brassica carinata HOM05D006769 ORTHO05D008522 6.7e-170 601.3 492 66.1
BcaC07g40819 Brassica carinata HOM05D006769 ORTHO05D008522 9.1e-151 537.7 496 61.3
C08p38120 Brassica napus HOM05D006769 ORTHO05D008522 9.1e-151 537.7 496 61.3
A09p55190 Brassica napus HOM05D006769 ORTHO05D008522 3.8e-149 532.3 493 61.7
BolC8t51387H Brassica oleracea HOM05D006769 ORTHO05D008522 6.5e-149 531.6 501 60.7
BraA09t40927Z Brassica rapa HOM05D006769 ORTHO05D008522 1.9e-148 530.0 493 61.5
THA.LOC104819455 Tarenaya hassleriana HOM05D006769 ORTHO05D008522 2.7e-147 526.2 523 58.1
Thecc.01G211800 Theobroma cacao HOM05D006769 ORTHO05D008522 1.0e-114 417.9 304 65.5
MD05G1163100 Malus domestica HOM05D006769 ORTHO05D008522 1.6e-110 404.1 287 66.6
Medtr7g052250 Medicago truncatula HOM05D006769 ORTHO05D008522 1.0e-109 401.4 336 60.1
Ca_07395_v3 Cicer arietinum L. HOM05D006769 ORTHO05D008522 2.3e-109 400.2 301 65.1
QL09p046131 Quercus lobata HOM05D006769 ORTHO05D008522 1.2e-107 394.4 455 48.4
CiPaw.13G054700 Carya illinoinensis HOM05D006769 ORTHO05D008522 1.6e-107 394.0 321 61.7
Glyma.08G344800 Glycine max HOM05D006769 ORTHO05D008522 1.6e-107 394.0 269 68.0
Potri.002G250400 Populus trichocarpa HOM05D006769 ORTHO05D008522 2.1e-107 393.7 296 63.9
Gohir.D07G166800 Gossypium hirsutum HOM05D006769 ORTHO05D008522 1.1e-106 391.3 359 55.4
Prupe.8G191400 Prunus persica HOM05D006769 ORTHO05D008522 1.1e-106 391.3 287 64.8
RcHm_v2.0_Chr6g0283131 Rosa chinensis HOM05D006769 ORTHO05D008522 1.1e-106 391.3 292 64.7
Duzib138G0404 Durio zibethinus HOM05D006769 ORTHO05D008522 2.3e-106 390.2 364 55.5
Psat3g151240 Pisum sativum HOM05D006769 ORTHO05D008522 2.3e-106 390.2 348 58.3
GSVIVG01006251001 Vitis vinifera HOM05D006769 ORTHO05D008522 3.1e-106 389.8 282 66.0
Eucgr.K02091 Eucalyptus grandis HOM05D006769 ORTHO05D008522 4.0e-106 389.4 256 69.1
arahy.Tifrunner.gnm1.ann1.N7FX8W Arachis hypogaea HOM05D006769 ORTHO05D008522 6.8e-106 388.7 282 66.0
Lj1g0001413 Lotus japonicus HOM05D006769 ORTHO05D008522 6.8e-106 388.7 263 68.8
Phvul.008G137400 Phaseolus vulgaris HOM05D006769 ORTHO05D008522 1.5e-105 387.5 348 56.6
Sc05g0001770 Simmondsia chinensis HOM05D006769 ORTHO05D008522 2.0e-105 387.1 363 57.6
TPR.G26832 Trifolium pratense HOM05D006769 ORTHO05D008522 2.0e-105 387.1 304 62.5
Atru.chr6.1512 Acer truncatum HOM05D006769 ORTHO05D008522 3.4e-105 386.3 285 64.9
FAN27G3257 Fragaria x ananassa HOM05D006769 ORTHO05D008522 3.4e-105 386.3 335 55.2
FvH4_2g17880 Fragaria vesca HOM05D006769 ORTHO05D008522 5.8e-105 385.6 351 53.6
PSO170G1917 Papaver somniferum HOM05D006769 ORTHO05D008522 7.5e-105 385.2 297 62.0
FAN15G1712 Fragaria x ananassa HOM05D006769 ORTHO05D008522 9.8e-105 384.8 304 58.2
MSTRG.12754 Avicennia marina HOM05D006769 ORTHO05D008522 1.3e-104 384.4 265 67.5
TWI18G0992 Tripterygium wilfordii HOM05D006769 ORTHO05D008522 1.3e-104 384.4 259 68.3
CANSAT01G2880 Cannabis sativa HOM05D006769 ORTHO05D008522 2.9e-104 383.3 342 57.3
Hma1.2p1_0161F.1_g071350 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 6.4e-104 382.1 307 62.2
Lalb_Chr03g0041161 Lupinus albus HOM05D006769 ORTHO05D008522 8.3e-104 381.7 262 68.7
Gorai.N003700 Gossypium raimondii HOM05D006769 ORTHO05D008522 1.1e-103 381.3 365 53.2
Manes.12G053000 Manihot esculenta HOM05D006769 ORTHO05D008522 1.4e-103 380.9 369 55.6
ECA248G0008 Erigeron canadensis HOM05D006769 ORTHO05D008522 1.9e-103 380.6 276 64.9
FAN24G2350 Fragaria x ananassa HOM05D006769 ORTHO05D008522 3.2e-103 379.8 351 53.0
arahy.Tifrunner.gnm1.ann1.ADK8RR Arachis hypogaea HOM05D006769 ORTHO05D008522 9.2e-103 378.3 334 57.5
Cfa010337 Carpinus fangiana HOM05D006769 ORTHO05D008522 2.1e-102 377.1 359 53.2
AUR62028711 Chenopodium quinoa HOM05D006769 ORTHO05D008522 2.7e-102 376.7 265 68.3
SHI10304 Sapria himalayana HOM05D006769 ORTHO05D008522 4.6e-102 375.9 253 69.2
Actinidia30020 Actinidia chinensis HOM05D006769 ORTHO05D008522 6.0e-102 375.6 288 62.8
ClCG09G008260 Citrullus lanatus HOM05D006769 ORTHO05D008522 1.7e-101 374.0 280 62.1
CsaV3_7G026790 Cucumis sativus L. HOM05D006769 ORTHO05D008522 3.9e-101 372.9 280 62.5
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 5.1e-101 372.5 287 61.3
Hund02792 Selenicereus undatus HOM05D006769 ORTHO05D008522 6.6e-101 372.1 251 68.5
Ah.11g051100 Amaranthus hybridus HOM05D006769 ORTHO05D008522 8.6e-101 371.7 362 54.1
HanXRQChr01g0007211 Helianthus annuus HOM05D006769 ORTHO05D008522 3.3e-100 369.8 285 61.8
CAN.G188.2 Capsicum annuum HOM05D006769 ORTHO05D008522 9.5e-100 368.2 287 62.0
PGR044G2601 Punica granatum HOM05D006769 ORTHO05D008522 2.8e-99 366.7 373 52.3
Migut.N00662 Erythranthe guttata HOM05D006769 ORTHO05D008522 3.6e-99 366.3 345 55.4
Aqoxy5G00037 Aquilegia oxysepala HOM05D006769 ORTHO05D008522 8.1e-99 365.2 331 56.5
AUR62008129 Chenopodium quinoa HOM05D006769 ORTHO05D008522 8.1e-99 365.2 366 51.9
Nn1g08265 Nelumbo nucifera HOM05D006769 ORTHO05D008522 8.1e-99 365.2 265 66.4
Cc01_g16210 Coffea canephora HOM05D006769 ORTHO05D008522 6.8e-98 362.1 382 50.5
EL10Ac5g10636 Beta vulgaris HOM05D006769 ORTHO05D008522 2.0e-97 360.5 257 66.1
Dinv12798 Davidia involucrata HOM05D006769 ORTHO05D008522 7.6e-97 358.6 308 57.1
unitig_37.g12548 Utricularia gibba HOM05D006769 ORTHO05D008522 2.2e-96 357.1 347 52.2
Oeu003634.1 Olea europaea HOM05D006769 ORTHO05D008522 8.4e-96 355.1 332 53.9
ATR0609G088 Amborella trichopoda HOM05D006769 ORTHO05D008522 2.7e-94 350.1 372 51.3
SalBow3G4668 Salvia bowleyana HOM05D006769 ORTHO05D008522 1.3e-93 347.8 324 56.2
Lj2A1118G65 Lonicera japonica HOM05D006769 ORTHO05D008522 1.5e-92 344.4 353 50.4
Nitab4.5_0008509g0020 Nicotiana tabacum HOM05D006769 ORTHO05D008522 2.1e-91 340.5 315 55.9
SEGI_34173 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 8.4e-88 328.6 249 61.8
Rhsim13G0052300 Rhododendron simsii HOM05D006769 ORTHO05D008522 2.4e-87 327.0 254 61.8
TAR365G1082 Trochodendron aralioides HOM05D006769 ORTHO05D008522 2.1e-86 323.9 308 52.9
AagrBONN_evm.TU.Sc2ySwM_344.907 Anthoceros agrestis HOM05D006769 ORTHO05D008522 2.3e-85 320.5 369 48.0
SMO241G0010 Selaginella moellendorffii HOM05D006769 ORTHO05D008522 4.9e-80 302.8 288 53.1
vmacro21305 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 6.0e-78 295.8 348 46.0
Lsat_1_v5_gn_5_178440 Lactuca sativa HOM05D006769 ORTHO05D008522 5.1e-77 292.7 306 50.7
HPP92_009961 Vanilla planifolia HOM05D006769 ORTHO05D008522 8.7e-77 292.0 257 58.4
HanXRQChr01g0007221 Helianthus annuus HOM05D006769 ORTHO05D008522 4.0e-74 283.1 338 45.6
Zm00001eb090430 Zea mays HOM05D006769 ORTHO05D008522 5.3e-74 282.7 254 56.7
Pp3c12_23250 Physcomitrium patens HOM05D006769 ORTHO05D008522 2.9e-72 276.9 315 47.0
CSS0037741 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 3.9e-69 266.5 173 69.9
Gohir.A07G159600 Gossypium hirsutum HOM05D006769 ORTHO05D008522 3.9e-69 266.5 210 63.3
Peaxi162Scf00335g01510 Petunia axillaris HOM05D006769 ORTHO05D008522 6.7e-69 265.8 182 68.7
Cpa.g.sc8.80 Carica papaya HOM05D006769 ORTHO05D008522 8.7e-69 265.4 208 63.9
VMungo1383G2812 Vigna mungo HOM05D006769 ORTHO05D008522 1.6e-67 261.2 263 52.9
CBR_g20401 Chara braunii HOM05D006769 ORTHO05D008522 2.0e-57 227.6 188 54.3
Mapoly0021s0139 Marchantia polymorpha HOM05D006769 ORTHO05D008522 2.2e-56 224.2 214 54.2
Ciclev10032230m.g Citrus clementina HOM05D006769 ORTHO05D008522 6.5e-56 222.6 167 63.5
Haze_03306 Corylus avellana HOM05D006769 ORTHO05D008522 1.6e-54 218.0 259 45.9
Sed0011761 Sechium edule HOM05D006769 ORTHO05D008522 2.7e-54 217.2 305 39.3
Hma1.2p1_0161F.1_g071340 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 7.9e-54 215.7 199 57.8
SEGI_18025 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 1.1e-52 211.8 153 65.4
Os06g0470800 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 2.4e-50 204.1 178 57.3
Nitab4.5_0000038g0100 Nicotiana tabacum HOM05D006769 ORTHO05D008522 6.5e-48 196.1 287 42.9
MCO07G255 Micromonas commoda HOM05D006769 ORTHO05D008522 3.2e-47 193.7 242 43.0
CDE09G0834 Ceratophyllum demersum HOM05D006769 ORTHO05D008522 2.1e-46 191.0 285 39.6
Haze_03305 Corylus avellana HOM05D006769 ORTHO05D008522 2.0e-41 174.5 114 67.5
QL09p046008 Quercus lobata HOM05D006769 ORTHO05D008522 1.0e-37 162.2 91 80.2
Cfa021866 Carpinus fangiana HOM05D006769 ORTHO05D008522 5.5e-31 139.8 334 35.0
PRCOL_00005345 Prasinoderma coloniale HOM05D006769 ORTHO05D008522 7.2e-31 139.4 316 33.5
RcHm_v2.0_Chr6g0283021 Rosa chinensis HOM05D006769 ORTHO05D008522 9.4e-31 139.0 123 56.1
VMungo1383G3069 Vigna mungo HOM05D006769 ORTHO05D008522 8.0e-30 136.0 88 69.3
Cpa.g.sc8.79 Carica papaya HOM05D006769 ORTHO05D008522 3.3e-28 130.6 85 67.1
Cre09.g410000 Chlamydomonas reinhardtii HOM05D006769 ORTHO05D008522 1.3e-27 128.6 136 46.3
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 1.3e-19 102.1 85 54.1
MD10G1152700 Malus domestica HOM05D006769 ORTHO05D008522 1.1e-18 99.0 147 40.1
SGA_v2.0_scaffold77G25292 Striga asiatica HOM05D006769 ORTHO05D008522 3.1e-18 97.4 140 37.9
CSS0014368 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 3.5e-17 94.0 160 40.0
Prupe.6G190400 Prunus persica HOM05D006769 ORTHO05D008522 7.8e-09 66.2 56 50.0
Prupe.2G270900 Prunus persica HOM05D006769 ORTHO05D008522 1.5e-07 62.0 59 49.2
vmacro02813 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 4.7e-06 57.0 107 36.4
Os06g0471100 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 8.0e-06 56.2 113 33.6


User provided reference genes

Program Settings