Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G26230 Arabidopsis thaliana HOM05D006018 ORTHO05D007545 2.5e-178 628.6 310 100.0
AL1G64680 Arabidopsis lyrata HOM05D006018 ORTHO05D007545 3.8e-171 604.7 310 95.5
Carub.0002s0907 Capsella rubella HOM05D006018 ORTHO05D007545 3.4e-167 591.7 310 92.9
CARHR103400 Cardamine hirsuta HOM05D006018 ORTHO05D007545 5.9e-164 580.9 310 91.6
Thhalv10021194m.g Eutrema salsugineum HOM05D006018 ORTHO05D007545 1.1e-162 576.6 307 90.6
BraA07t28684Z Brassica rapa HOM05D006018 ORTHO05D007545 1.4e-160 569.7 310 90.0
C07p13770 Brassica napus HOM05D006018 ORTHO05D007545 3.1e-160 568.5 306 90.2
A07p08930 Brassica napus HOM05D006018 ORTHO05D007545 5.2e-160 567.8 304 90.5
BcaC06g35533 Brassica carinata HOM05D006018 ORTHO05D007545 6.8e-160 567.4 306 89.9
BcaB06g26497 Brassica carinata HOM05D006018 ORTHO05D007545 3.4e-159 565.1 311 88.1
BolC7t41872H Brassica oleracea HOM05D006018 ORTHO05D007545 7.5e-159 563.9 306 89.5
Sp3g21150 Schrenkiella parvula HOM05D006018 ORTHO05D007545 3.7e-158 561.6 311 88.1
SpUn0047_0030 Schrenkiella parvula HOM05D006018 ORTHO05D007545 3.7e-158 561.6 311 88.1
Aa31LG2G1810 Aethionema arabicum HOM05D006018 ORTHO05D007545 3.3e-154 548.5 311 86.5
THA.LOC104801755 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 1.9e-149 532.7 310 81.0
THA.LOC104804947 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 3.2e-149 531.9 310 80.3
THA.LOC104823771 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 7.1e-149 530.8 310 81.6
Gorai.012G019800 Gossypium raimondii HOM05D006018 ORTHO05D007545 1.9e-133 479.6 311 74.9
Gohir.D04G017100 Gossypium hirsutum HOM05D006018 ORTHO05D007545 7.1e-133 477.6 311 74.3
COL.COLO4_07822 Corchorus olitorius HOM05D006018 ORTHO05D007545 1.0e-131 473.8 313 74.4
Gohir.A05G398800 Gossypium hirsutum HOM05D006018 ORTHO05D007545 3.0e-131 472.2 311 73.6
Migut.F00847 Erythranthe guttata HOM05D006018 ORTHO05D007545 6.6e-131 471.1 305 74.4
Thecc.10G116100 Theobroma cacao HOM05D006018 ORTHO05D007545 1.3e-129 466.8 310 73.2
Dinv08587 Davidia involucrata HOM05D006018 ORTHO05D007545 6.9e-128 461.1 310 71.3
Lj6g0008960 Lotus japonicus HOM05D006018 ORTHO05D007545 9.0e-128 460.7 310 73.2
Duzib106G1265 Durio zibethinus HOM05D006018 ORTHO05D007545 2.0e-127 459.5 311 71.7
CSS0019594 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 3.4e-127 458.8 310 72.6
CSS0043702 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 3.4e-127 458.8 310 72.6
Aqoxy1G00667 Aquilegia oxysepala HOM05D006018 ORTHO05D007545 5.8e-127 458.0 310 69.7
PSO384G0865 Papaver somniferum HOM05D006018 ORTHO05D007545 9.9e-127 457.2 310 70.0
TWI38G2380 Tripterygium wilfordii HOM05D006018 ORTHO05D007545 9.9e-127 457.2 310 72.6
PSO339G6589 Papaver somniferum HOM05D006018 ORTHO05D007545 2.2e-126 456.1 310 70.0
CSS0004952 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 3.8e-126 455.3 310 72.9
Lalb_Chr19g0128951 Lupinus albus HOM05D006018 ORTHO05D007545 6.4e-126 454.5 311 71.4
TAR623G0250 Trochodendron aralioides HOM05D006018 ORTHO05D007545 6.4e-126 454.5 310 71.0
CANSAT56G4342 Cannabis sativa HOM05D006018 ORTHO05D007545 1.1e-125 453.8 310 71.9
HanXRQChr02g0053551 Helianthus annuus HOM05D006018 ORTHO05D007545 1.4e-125 453.4 315 71.1
ECA238G1473 Erigeron canadensis HOM05D006018 ORTHO05D007545 1.9e-125 453.0 310 70.6
SGA_v2.0_scaffold2G01315 Striga asiatica HOM05D006018 ORTHO05D007545 4.2e-125 451.8 307 72.3
Ca_12272_v3 Cicer arietinum L. HOM05D006018 ORTHO05D007545 7.1e-125 451.1 311 72.0
Nitab4.5_0007799g0030 Nicotiana tabacum HOM05D006018 ORTHO05D007545 9.3e-125 450.7 307 69.4
CiPaw.13G043500 Carya illinoinensis HOM05D006018 ORTHO05D007545 2.1e-124 449.5 310 69.7
MSTRG.9035 Avicennia marina HOM05D006018 ORTHO05D007545 2.7e-124 449.1 305 71.1
Nn6g34699 Nelumbo nucifera HOM05D006018 ORTHO05D007545 2.7e-124 449.1 310 70.0
PGSC0003DMG401001978 Solanum tuberosum HOM05D006018 ORTHO05D007545 2.7e-124 449.1 307 69.4
Cpa.g.sc54.21 Carica papaya HOM05D006018 ORTHO05D007545 3.5e-124 448.7 310 71.3
Manes.10G059900 Manihot esculenta HOM05D006018 ORTHO05D007545 3.5e-124 448.7 307 70.7
Peaxi162Scf00725g00522 Petunia axillaris HOM05D006018 ORTHO05D007545 3.5e-124 448.7 304 71.1
Potri.010G242600 Populus trichocarpa HOM05D006018 ORTHO05D007545 3.5e-124 448.7 310 71.0
MD07G1062200 Malus domestica HOM05D006018 ORTHO05D007545 1.0e-123 447.2 310 69.7
Phvul.007G234300 Phaseolus vulgaris HOM05D006018 ORTHO05D007545 1.3e-123 446.8 311 69.8
TPR.G19796 Trifolium pratense HOM05D006018 ORTHO05D007545 1.3e-123 446.8 311 71.1
GSVIVG01034634001 Vitis vinifera HOM05D006018 ORTHO05D007545 1.3e-123 446.8 309 69.9
FvH4_7g03231 Fragaria vesca HOM05D006018 ORTHO05D007545 2.3e-123 446.0 309 69.3
Solyc11g006550.3 Solanum lycopersicum HOM05D006018 ORTHO05D007545 3.0e-123 445.7 307 69.1
Medtr1g048370 Medicago truncatula HOM05D006018 ORTHO05D007545 5.1e-123 444.9 311 71.4
Ciclev10016037m.g Citrus clementina HOM05D006018 ORTHO05D007545 6.7e-123 444.5 310 70.3
RcHm_v2.0_Chr1g0325281 Rosa chinensis HOM05D006018 ORTHO05D007545 6.7e-123 444.5 308 68.8
SalBow3G1532 Salvia bowleyana HOM05D006018 ORTHO05D007545 1.1e-122 443.7 316 69.9
Sopen11g002450 Solanum pennellii HOM05D006018 ORTHO05D007545 1.5e-122 443.4 307 69.1
Psat6g049120 Pisum sativum HOM05D006018 ORTHO05D007545 2.5e-122 442.6 311 69.5
Sabra10G0189600 Salix brachista HOM05D006018 ORTHO05D007545 2.5e-122 442.6 312 69.9
Eucgr.J00283 Eucalyptus grandis HOM05D006018 ORTHO05D007545 7.4e-122 441.0 310 68.4
PGR044G0766 Punica granatum HOM05D006018 ORTHO05D007545 9.6e-122 440.7 308 68.2
CAN.G143.25 Capsicum annuum HOM05D006018 ORTHO05D007545 1.6e-121 439.9 307 67.8
Glyma.10G121524 Glycine max HOM05D006018 ORTHO05D007545 2.8e-121 439.1 305 68.9
VMungo0720G2948 Vigna mungo HOM05D006018 ORTHO05D007545 2.8e-121 439.1 311 68.8
arahy.Tifrunner.gnm1.ann1.QNY1I5 Arachis hypogaea HOM05D006018 ORTHO05D007545 6.2e-121 438.0 310 68.1
MELO3C012335.2 Cucumis melo HOM05D006018 ORTHO05D007545 8.1e-121 437.6 305 70.5
Glyma.20G072400 Glycine max HOM05D006018 ORTHO05D007545 1.1e-120 437.2 312 68.6
CDE02G2990 Ceratophyllum demersum HOM05D006018 ORTHO05D007545 1.8e-120 436.4 305 67.5
arahy.Tifrunner.gnm1.ann1.Z71440 Arachis hypogaea HOM05D006018 ORTHO05D007545 2.4e-120 436.0 310 69.0
Cc02_g09390 Coffea canephora HOM05D006018 ORTHO05D007545 3.1e-120 435.6 305 69.2
FAN10G2047 Fragaria x ananassa HOM05D006018 ORTHO05D007545 3.1e-120 435.6 309 68.0
MD02G1258600 Malus domestica HOM05D006018 ORTHO05D007545 3.1e-120 435.6 310 67.7
Prupe.2G072000 Prunus persica HOM05D006018 ORTHO05D007545 3.1e-120 435.6 310 68.1
Hund06805 Selenicereus undatus HOM05D006018 ORTHO05D007545 5.3e-120 434.9 326 65.6
arahy.Tifrunner.gnm1.ann1.Z7U9ST Arachis hypogaea HOM05D006018 ORTHO05D007545 1.2e-119 433.7 318 67.3
AUR62034490 Chenopodium quinoa HOM05D006018 ORTHO05D007545 1.5e-119 433.3 305 67.5
EL10Ac4g08718 Beta vulgaris HOM05D006018 ORTHO05D007545 3.8e-118 428.7 305 66.2
Nitab4.5_0001781g0180 Nicotiana tabacum HOM05D006018 ORTHO05D007545 6.4e-118 427.9 307 67.1
arahy.Tifrunner.gnm1.ann1.V4FSHN Arachis hypogaea HOM05D006018 ORTHO05D007545 1.9e-117 426.4 326 64.7
CsaV3_5G035210 Cucumis sativus L. HOM05D006018 ORTHO05D007545 4.2e-117 425.2 305 68.2
unitig_899.g14460 Utricularia gibba HOM05D006018 ORTHO05D007545 4.2e-117 425.2 305 69.2
Lsat_1_v5_gn_2_105841 Lactuca sativa HOM05D006018 ORTHO05D007545 1.6e-116 423.3 307 68.4
Sed0014972 Sechium edule HOM05D006018 ORTHO05D007545 2.1e-116 422.9 305 67.9
RcHm_v2.0_Chr1g0325311 Rosa chinensis HOM05D006018 ORTHO05D007545 6.0e-116 421.4 354 59.9
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 1.3e-113 413.7 290 69.0
Haze_03464 Corylus avellana HOM05D006018 ORTHO05D007545 3.7e-113 412.1 388 56.2
Atru.chr12.1071 Acer truncatum HOM05D006018 ORTHO05D007545 8.2e-113 411.0 272 72.1
Ah.06g186820 Amaranthus hybridus HOM05D006018 ORTHO05D007545 1.4e-112 410.2 328 60.4
FAN01G2803 Fragaria x ananassa HOM05D006018 ORTHO05D007545 3.4e-111 405.6 312 64.4
Zm00001eb146880 Zea mays HOM05D006018 ORTHO05D007545 5.8e-111 404.8 308 64.0
vmacro10321 Vaccinium macrocarpon HOM05D006018 ORTHO05D007545 6.5e-110 401.4 347 60.5
ClCG05G021930 Citrullus lanatus HOM05D006018 ORTHO05D007545 8.4e-110 401.0 306 66.0
ATR0772G096 Amborella trichopoda HOM05D006018 ORTHO05D007545 1.9e-106 389.8 302 62.6
Hma1.2p1_0381F.1_g139980 Hydrangea macrophylla HOM05D006018 ORTHO05D007545 5.0e-102 375.2 240 74.2
Nn2g14297 Nelumbo nucifera HOM05D006018 ORTHO05D007545 2.7e-100 369.4 310 60.6
Actinidia34731 Actinidia chinensis HOM05D006018 ORTHO05D007545 4.6e-100 368.6 245 71.8
FAN03G1346 Fragaria x ananassa HOM05D006018 ORTHO05D007545 1.0e-99 367.5 285 63.5
HPP92_027461 Vanilla planifolia HOM05D006018 ORTHO05D007545 6.7e-99 364.8 307 59.6
Lj3A923T60 Lonicera japonica HOM05D006018 ORTHO05D007545 1.9e-98 363.2 281 64.8
DCAR_004552 Daucus carota HOM05D006018 ORTHO05D007545 6.3e-97 358.2 251 69.7
AUR62034169 Chenopodium quinoa HOM05D006018 ORTHO05D007545 1.7e-94 350.1 241 67.2
Rhsim09G0141100 Rhododendron simsii HOM05D006018 ORTHO05D007545 8.5e-94 347.8 310 59.7
Pp3c14_15560 Physcomitrium patens HOM05D006018 ORTHO05D007545 2.3e-91 339.7 301 56.8
QL04p047894 Quercus lobata HOM05D006018 ORTHO05D007545 8.0e-84 314.7 206 70.9
Sc09g0005130 Simmondsia chinensis HOM05D006018 ORTHO05D007545 1.5e-82 310.5 211 67.8
SMO134G0227 Selaginella moellendorffii HOM05D006018 ORTHO05D007545 1.4e-80 303.9 306 53.3
AagrBONN_evm.TU.Sc2ySwM_344.453 Anthoceros agrestis HOM05D006018 ORTHO05D007545 2.6e-79 299.7 305 51.1
Mapoly0079s0008 Marchantia polymorpha HOM05D006018 ORTHO05D007545 1.1e-77 294.3 305 52.8
Cre12.g504950 Chlamydomonas reinhardtii HOM05D006018 ORTHO05D007545 1.4e-64 250.8 293 45.1
CSS0009212 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 5.7e-58 228.8 148 75.7
CSS0030296 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 2.0e-55 220.3 146 75.3
MCO08G151 Micromonas commoda HOM05D006018 ORTHO05D007545 2.0e-55 220.3 291 41.9
PRCOL_00005817 Prasinoderma coloniale HOM05D006018 ORTHO05D007545 8.6e-54 214.9 320 42.2
CBR_g20325 Chara braunii HOM05D006018 ORTHO05D007545 4.3e-53 212.6 181 56.4
Os01g0865100 Oryza sativa ssp. japonica HOM05D006018 ORTHO05D007545 2.3e-51 206.8 159 64.2
Oeu009248.1 Olea europaea HOM05D006018 ORTHO05D007545 4.1e-40 169.5 184 52.7
Hma1.2p1_0381F.1_g139990 Hydrangea macrophylla HOM05D006018 ORTHO05D007545 1.5e-37 161.0 149 57.0
Cfa010524 Carpinus fangiana HOM05D006018 ORTHO05D007545 4.0e-35 152.9 149 53.0
arahy.Tifrunner.gnm1.ann1.WX42FR Arachis hypogaea HOM05D006018 ORTHO05D007545 5.2e-27 125.9 122 53.3
SEGI_29992 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 8.9e-27 125.2 96 60.4
arahy.Tifrunner.gnm1.ann1.BN00BV Arachis hypogaea HOM05D006018 ORTHO05D007545 2.0e-26 124.0 99 62.6
FAN01G0562 Fragaria x ananassa HOM05D006018 ORTHO05D007545 4.4e-18 96.3 67 65.7
Eucgr.J00287 Eucalyptus grandis HOM05D006018 ORTHO05D007545 1.7e-17 94.4 58 72.4
SEGI_30163 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 2.2e-17 94.0 67 62.7
SEGI_33218 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 6.6e-14 82.4 66 60.6
SEGI_30780 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 4.3e-13 79.7 61 62.3


User provided reference genes

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