Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G26210 Arabidopsis thaliana HOM05D006517 ORTHO05D007886 2.6e-101 372.1 191 100.0
AL4G18760 Arabidopsis lyrata HOM05D006517 ORTHO05D007886 5.2e-94 347.8 191 94.8
Carub.0004s0605 Capsella rubella HOM05D006517 ORTHO05D007886 4.4e-85 318.2 193 83.4
CARHR115040 Cardamine hirsuta HOM05D006517 ORTHO05D007886 1.9e-83 312.8 188 85.6
Sp4g06310 Schrenkiella parvula HOM05D006517 ORTHO05D007886 8.7e-73 277.3 187 79.7
Aa31LG5G9580 Aethionema arabicum HOM05D006517 ORTHO05D007886 1.5e-69 266.5 194 74.2
C04p55990 Brassica napus HOM05D006517 ORTHO05D007886 1.5e-61 240.0 175 76.0
BolC4t27132H Brassica oleracea HOM05D006517 ORTHO05D007886 1.5e-61 240.0 177 75.1
BraA04t17607Z Brassica rapa HOM05D006517 ORTHO05D007886 2.2e-60 236.1 193 69.9
A04p20280 Brassica napus HOM05D006517 ORTHO05D007886 2.4e-59 232.6 193 69.4
THA.LOC104804445 Tarenaya hassleriana HOM05D006517 ORTHO05D007886 1.9e-56 223.0 206 63.1
BcaNung07167 Brassica carinata HOM05D006517 ORTHO05D007886 3.1e-54 215.7 173 69.9
COL.COLO4_21178 Corchorus olitorius HOM05D006517 ORTHO05D007886 1.4e-51 206.8 200 56.5
Potri.018G047000 Populus trichocarpa HOM05D006517 ORTHO05D007886 4.2e-51 205.3 201 56.2
Thhalv10002200m.g Eutrema salsugineum HOM05D006517 ORTHO05D007886 9.3e-51 204.1 189 63.5
Phvul.003G125800 Phaseolus vulgaris HOM05D006517 ORTHO05D007886 9.3e-51 204.1 197 56.3
Glyma.13G116000 Glycine max HOM05D006517 ORTHO05D007886 2.7e-50 202.6 207 56.5
Medtr4g124370 Medicago truncatula HOM05D006517 ORTHO05D007886 6.0e-50 201.4 206 55.8
Lalb_Chr13g0299091 Lupinus albus HOM05D006517 ORTHO05D007886 1.0e-49 200.7 210 56.2
Gohir.D08G268100 Gossypium hirsutum HOM05D006517 ORTHO05D007886 1.8e-49 199.9 203 54.7
Gorai.004G285800 Gossypium raimondii HOM05D006517 ORTHO05D007886 1.8e-49 199.9 203 54.7
Manes.03G055100 Manihot esculenta HOM05D006517 ORTHO05D007886 1.8e-49 199.9 201 56.7
TPR.G12541 Trifolium pratense HOM05D006517 ORTHO05D007886 3.0e-49 199.1 206 55.3
Glyma.17G043800 Glycine max HOM05D006517 ORTHO05D007886 6.7e-49 198.0 204 56.9
Lj4g0027818 Lotus japonicus HOM05D006517 ORTHO05D007886 1.1e-48 197.2 204 55.9
Gohir.A08G246900 Gossypium hirsutum HOM05D006517 ORTHO05D007886 9.6e-48 194.1 203 53.7
Duzib168G1027 Durio zibethinus HOM05D006517 ORTHO05D007886 1.3e-47 193.7 208 52.4
Ca_21351_v3 Cicer arietinum L. HOM05D006517 ORTHO05D007886 1.6e-47 193.4 208 54.8
Atru.chr7.1806 Acer truncatum HOM05D006517 ORTHO05D007886 3.7e-47 192.2 205 54.6
CiPaw.03G198900 Carya illinoinensis HOM05D006517 ORTHO05D007886 6.3e-47 191.4 201 55.2
Oeu000272.2 Olea europaea HOM05D006517 ORTHO05D007886 8.2e-47 191.0 210 53.3
Migut.J00866 Erythranthe guttata HOM05D006517 ORTHO05D007886 2.4e-46 189.5 205 53.2
Thecc.09G067300 Theobroma cacao HOM05D006517 ORTHO05D007886 6.9e-46 188.0 205 52.7
Prupe.7G189300 Prunus persica HOM05D006517 ORTHO05D007886 9.0e-46 187.6 205 53.2
QL11p003516 Quercus lobata HOM05D006517 ORTHO05D007886 1.5e-45 186.8 201 52.7
GSVIVG01000273001 Vitis vinifera HOM05D006517 ORTHO05D007886 2.0e-45 186.4 202 54.0
Eucgr.C00754 Eucalyptus grandis HOM05D006517 ORTHO05D007886 3.4e-45 185.7 201 52.7
Duzib150G1397 Durio zibethinus HOM05D006517 ORTHO05D007886 4.5e-45 185.3 208 51.4
Cfa010680 Carpinus fangiana HOM05D006517 ORTHO05D007886 7.6e-45 184.5 202 53.0
Lsat_1_v5_gn_8_118080 Lactuca sativa HOM05D006517 ORTHO05D007886 1.3e-44 183.7 189 52.9
Duzib187G0844 Durio zibethinus HOM05D006517 ORTHO05D007886 2.2e-44 183.0 204 51.5
Oeu000950.1 Olea europaea HOM05D006517 ORTHO05D007886 2.9e-44 182.6 213 51.6
SGA_v2.0_scaffold31G12706 Striga asiatica HOM05D006517 ORTHO05D007886 3.2e-43 179.1 201 50.2
RcHm_v2.0_Chr2g0096541 Rosa chinensis HOM05D006517 ORTHO05D007886 9.3e-43 177.6 202 54.0
EL10Ac8g18944 Beta vulgaris HOM05D006517 ORTHO05D007886 1.2e-42 177.2 203 50.7
CSS0016512 Camellia sinensis var. sinensis HOM05D006517 ORTHO05D007886 1.2e-42 177.2 203 51.2
Potri.006G217100 Populus trichocarpa HOM05D006517 ORTHO05D007886 1.6e-42 176.8 203 50.2
PGR124G0001 Punica granatum HOM05D006517 ORTHO05D007886 1.6e-42 176.8 200 52.0
PGR142G0057 Punica granatum HOM05D006517 ORTHO05D007886 1.6e-42 176.8 200 52.0
ECA232G0292 Erigeron canadensis HOM05D001622 ORTHO05D002989 4.6e-42 175.3 189 50.3
HanXRQChr09g0258421 Helianthus annuus HOM05D006517 ORTHO05D007886 7.9e-42 174.5 185 52.4
Actinidia39602 Actinidia chinensis HOM05D006517 ORTHO05D007886 3.9e-41 172.2 201 49.3
TAR383G1010 Trochodendron aralioides HOM05D006517 ORTHO05D007886 1.1e-40 170.6 205 48.3
ClCG03G014700 Citrullus lanatus HOM05D006517 ORTHO05D007886 1.5e-40 170.2 196 50.0
Ciclev10009053m.g Citrus clementina HOM05D006517 ORTHO05D007886 2.5e-40 169.5 206 49.0
SGA_v2.0_scaffold318G48507 Striga asiatica HOM05D006517 ORTHO05D007886 2.5e-40 169.5 192 49.0
Sed0014627 Sechium edule HOM05D006517 ORTHO05D007886 3.3e-40 169.1 195 48.7
SalBow6G1494 Salvia bowleyana HOM05D006517 ORTHO05D007886 5.7e-40 168.3 192 51.6
Sc18g0002960 Simmondsia chinensis HOM05D006517 ORTHO05D007886 9.7e-40 167.5 201 49.8
Dinv42443 Davidia involucrata HOM05D006517 ORTHO05D007886 1.3e-39 167.2 202 51.0
Nitab4.5_0000987g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 1.6e-39 166.8 206 47.6
unitig_26.g9120 Utricularia gibba HOM05D006517 ORTHO05D007886 2.8e-39 166.0 201 48.8
CsaV3_1G041470 Cucumis sativus L. HOM05D006517 ORTHO05D007886 1.1e-38 164.1 162 53.7
AUR62025324 Chenopodium quinoa HOM05D006517 ORTHO05D007886 1.4e-38 163.7 204 46.1
Hund08920 Selenicereus undatus HOM05D006517 ORTHO05D007886 2.4e-38 162.9 193 49.7
CAN.G55.2 Capsicum annuum HOM05D006517 ORTHO05D007886 6.9e-38 161.4 204 48.0
MD15G1225700 Malus domestica HOM05D006517 ORTHO05D007886 6.9e-38 161.4 205 48.8
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 9.1e-38 161.0 203 46.3
VMungo1215G1783 Vigna mungo HOM05D006517 ORTHO05D007886 2.0e-37 159.8 110 72.7
ATR0006G021 Amborella trichopoda HOM05D006517 ORTHO05D007886 2.6e-37 159.5 209 45.0
Zm00001eb327610 Zea mays HOM05D006517 ORTHO05D007886 4.5e-37 158.7 180 52.2
PSO675G5415 Papaver somniferum HOM05D006517 ORTHO05D007886 5.9e-37 158.3 209 48.3
PSO541G2149 Papaver somniferum HOM05D006517 ORTHO05D007886 1.7e-36 156.8 209 48.8
MD02G1105800 Malus domestica HOM05D006517 ORTHO05D007886 6.5e-36 154.8 121 66.9
CANSAT56G3804 Cannabis sativa HOM05D006517 ORTHO05D007886 8.5e-36 154.5 203 46.8
FAN23G1398 Fragaria x ananassa HOM05D006517 ORTHO05D007886 8.5e-36 154.5 198 49.0
Nitab4.5_0005239g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 2.5e-35 152.9 201 45.8
MELO3C015558.2 Cucumis melo HOM05D006517 ORTHO05D007886 3.2e-35 152.5 121 62.8
arahy.Tifrunner.gnm1.ann1.2S6U7G Arachis hypogaea HOM05D006517 ORTHO05D007886 4.2e-35 152.1 183 51.4
FvH4_1g09680 Fragaria vesca HOM05D006517 ORTHO05D007886 4.2e-35 152.1 126 63.5
FAN26G1998 Fragaria x ananassa HOM05D006517 ORTHO05D007886 4.2e-35 152.1 126 63.5
Sabra06G0167400 Salix brachista HOM05D006517 ORTHO05D007886 5.5e-35 151.8 218 43.1
Cpa.g.sc82.30 Carica papaya HOM05D006517 ORTHO05D007886 9.4e-35 151.0 102 68.6
CDE05G1274 Ceratophyllum demersum HOM05D006517 ORTHO05D007886 1.2e-34 150.6 208 44.7
CANSAT56G0784 Cannabis sativa HOM05D006517 ORTHO05D007886 2.7e-34 149.4 204 46.6
Cc09_g04380 Coffea canephora HOM05D006517 ORTHO05D007886 3.6e-34 149.1 126 61.1
MBI13_g05966_MAGBIO Magnolia biondii HOM05D006517 ORTHO05D007886 7.9e-34 147.9 210 42.4
Nn8g38504 Nelumbo nucifera HOM05D006517 ORTHO05D007886 3.9e-33 145.6 132 58.3
Rhsim05G0081000 Rhododendron simsii HOM05D006517 ORTHO05D007886 6.7e-33 144.8 251 40.6
Mapoly0086s0040 Marchantia polymorpha HOM05D006517 ORTHO05D007886 1.1e-32 144.1 177 47.5
Solyc06g031690.4 Solanum lycopersicum HOM05D006517 ORTHO05D007886 4.8e-31 138.7 99 66.7
Actinidia39601 Actinidia chinensis HOM05D006517 ORTHO05D007886 4.1e-30 135.6 181 45.3
Aqoxy7G00916 Aquilegia oxysepala HOM05D006517 ORTHO05D007886 4.1e-30 135.6 212 42.0
Os07g0618600 Oryza sativa ssp. japonica HOM05D006517 ORTHO05D007886 1.2e-29 134.0 109 61.5
SMO117G0175 Selaginella moellendorffii HOM05D006517 ORTHO05D007886 4.5e-29 132.1 177 44.6
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 1.0e-28 131.0 153 49.7
AUR62028338 Chenopodium quinoa HOM05D000417 ORTHO05D007886 1.4e-27 127.1 175 42.9
FAN28G2617 Fragaria x ananassa HOM05D006517 ORTHO05D007886 4.2e-27 125.6 202 44.1
Psat4g020160 Pisum sativum HOM05D006517 ORTHO05D007886 9.4e-27 124.4 163 49.1
DCAR_010521 Daucus carota HOM05D006517 ORTHO05D007886 5.2e-25 118.6 214 36.0
FAN23G2301 Fragaria x ananassa HOM05D006517 ORTHO05D007886 2.0e-24 116.7 198 42.9
Haze_03605 Corylus avellana HOM05D006517 ORTHO05D007886 7.4e-24 114.8 180 43.9
FAN19G3155 Fragaria x ananassa HOM05D006517 ORTHO05D007886 9.7e-24 114.4 126 54.0
FAN26G3113 Fragaria x ananassa HOM05D006517 ORTHO05D007886 9.7e-24 114.4 126 54.0
arahy.Tifrunner.gnm1.ann1.0410DC Arachis hypogaea HOM05D006517 ORTHO05D007886 4.1e-22 109.0 159 45.9
Pp3c18_11010 Physcomitrium patens HOM05D006517 ORTHO05D007886 1.6e-21 107.1 113 48.7
CBR_g36802 Chara braunii HOM05D006517 ORTHO05D007886 2.0e-16 90.1 164 36.6
Medtr5g081760 Medicago truncatula HOM05D006517 ORTHO05D007886 1.1e-14 84.3 81 54.3
Peaxi162Scf00658g00031 Petunia axillaris HOM05D000115 ORTHO05D000464 1.1e-14 84.3 147 40.8
Medtr4g036440 Medicago truncatula HOM05D006517 ORTHO05D007886 9.1e-14 81.3 75 58.7
vmacro13145 Vaccinium macrocarpon HOM05D006517 ORTHO05D007886 2.7e-13 79.7 197 34.5
Medtr8g098885 Medicago truncatula HOM05D006517 ORTHO05D007886 6.5e-12 75.1 49 69.4
HPP92_002241 Vanilla planifolia HOM05D000872 ORTHO05D000777 1.4e-09 67.4 120 40.0
TWI73G0176 Tripterygium wilfordii HOM05D000088 ORTHO05D003056 1.3e-07 60.8 110 32.7
TWI09G1601 Tripterygium wilfordii HOM05D000088 ORTHO05D003056 3.7e-07 59.3 97 35.1
SGA_v2.0_scaffold123G33471 Striga asiatica HOM05D000088 ORTHO05D003056 3.1e-06 56.2 80 40.0


User provided reference genes

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