Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 1.5e-176 622.9 332 100.0
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 1.2e-165 586.6 332 96.1
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 1.4e-163 579.7 332 95.2
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 3.1e-150 535.4 337 88.4
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 1.5e-149 533.1 336 87.8
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 3.2e-147 525.4 345 85.5
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 3.5e-146 521.9 338 86.1
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 3.0e-145 518.8 337 85.8
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 5.1e-145 518.1 338 85.5
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 1.6e-138 496.5 356 78.4
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 3.2e-131 472.2 336 78.0
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 1.9e-123 446.4 335 72.8
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 2.3e-121 439.5 323 76.5
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 2.5e-120 436.0 323 75.9
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 2.5e-120 436.0 323 74.9
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 3.1e-118 429.1 331 71.6
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 2.6e-117 426.0 327 71.9
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 5.8e-117 424.9 327 72.5
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 1.7e-116 423.3 303 75.6
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 6.5e-116 421.4 336 70.8
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 5.5e-115 418.3 261 83.5
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 2.1e-114 416.4 261 83.5
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 3.5e-114 415.6 335 70.1
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 3.5e-114 415.6 337 70.6
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 1.3e-113 413.7 317 71.3
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 3.9e-113 412.1 335 68.1
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 5.1e-113 411.8 335 68.7
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 8.7e-113 411.0 291 77.0
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 1.5e-112 410.2 335 68.7
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 3.3e-112 409.1 335 68.1
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 4.3e-112 408.7 335 67.8
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 5.7e-112 408.3 324 69.4
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 7.4e-112 407.9 323 69.0
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 7.4e-112 407.9 296 72.6
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 1.3e-111 407.1 335 66.6
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 1.6e-111 406.8 322 67.4
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 2.2e-111 406.4 335 67.5
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 1.1e-110 404.1 328 68.3
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 1.1e-110 404.1 331 68.3
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 1.1e-110 404.1 295 74.2
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 1.8e-110 403.3 323 69.0
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 2.4e-110 402.9 302 70.5
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 5.3e-110 401.7 261 79.7
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 6.9e-110 401.4 336 67.9
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 1.0e-108 397.5 263 77.6
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 2.2e-108 396.4 335 66.3
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 2.9e-108 396.0 249 81.5
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 5.0e-108 395.2 259 78.8
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 5.0e-108 395.2 337 65.0
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 6.5e-108 394.8 260 78.5
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 1.1e-107 394.0 325 68.3
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 3.2e-107 392.5 328 67.4
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 4.2e-107 392.1 295 72.9
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 4.2e-107 392.1 321 66.4
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 5.5e-107 391.7 330 65.5
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 2.1e-106 389.8 262 76.0
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 2.1e-106 389.8 250 81.6
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 2.7e-106 389.4 334 66.5
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 6.1e-106 388.3 296 70.9
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 7.9e-106 387.9 347 64.0
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 3.9e-105 385.6 343 63.8
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 3.9e-105 385.6 322 66.1
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 5.1e-105 385.2 334 65.9
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 6.7e-105 384.8 322 65.5
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 6.7e-105 384.8 322 66.1
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 8.7e-105 384.4 293 71.0
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 1.5e-104 383.6 323 65.0
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 1.5e-104 383.6 357 61.3
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 4.3e-104 382.1 324 65.7
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 4.3e-104 382.1 236 82.2
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 1.7e-103 380.2 335 65.1
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 1.7e-103 380.2 323 65.3
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 1.7e-103 380.2 323 64.7
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 2.8e-103 379.4 251 77.3
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 1.1e-102 377.5 323 66.3
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 1.4e-102 377.1 337 64.4
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 1.8e-102 376.7 299 67.9
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 6.9e-102 374.8 260 73.5
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 9.1e-102 374.4 326 63.8
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 1.2e-101 374.0 286 69.2
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 3.4e-101 372.5 289 70.6
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 1.0e-100 370.9 238 78.6
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 1.0e-100 370.9 335 63.3
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 1.9e-99 366.7 324 63.6
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 6.3e-95 351.7 293 64.5
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 8.2e-95 351.3 250 72.8
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 7.7e-93 344.7 269 67.7
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 1.0e-92 344.4 292 64.7
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 1.0e-89 334.3 221 74.7
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 2.6e-88 329.7 235 71.1
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 3.3e-88 329.3 253 72.7
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 3.3e-88 329.3 231 75.8
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 9.7e-88 327.8 278 65.5
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 3.7e-87 325.9 327 57.2
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 8.5e-84 314.7 325 58.8
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 8.8e-81 304.7 216 67.1
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 1.3e-79 300.8 206 78.2
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 2.7e-77 293.1 226 71.7
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 1.6e-74 283.9 260 56.9
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 5.2e-73 278.9 188 77.7
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 9.8e-72 274.6 260 54.6
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 9.1e-70 268.1 263 53.6
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 2.1e-66 256.9 270 58.9
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 3.7e-63 246.1 251 52.6
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.2e-61 241.1 270 49.3
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 7.8e-61 238.4 261 51.3
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 5.6e-59 232.3 249 53.0
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.2e-58 231.1 253 49.8
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 4.1e-54 216.1 129 86.0
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 8.0e-50 201.8 280 41.4
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 6.6e-44 182.2 166 66.9
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 2.1e-42 177.2 244 43.4
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 7.5e-40 168.7 246 39.0
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 2.1e-37 160.6 125 67.2
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 4.0e-25 119.8 244 30.3
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 7.1e-22 109.0 253 32.4
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 7.1e-22 109.0 288 34.4
Hund03397 Selenicereus undatus HOM05D006532 ORTHO05D381031 1.9e-06 57.8 32 93.8
Sc11g0003830 Simmondsia chinensis HOM05D006532 ORTHO05D387458 4.2e-06 56.6 52 53.8


User provided reference genes

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