Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G25740 Arabidopsis thaliana HOM05D004583 ORTHO05D005469 0.0e+00 1081.2 548 100.0
AL4G17420 Arabidopsis lyrata HOM05D004583 ORTHO05D005469 3.7e-294 1014.2 548 94.3
Carub.0004s0553 Capsella rubella HOM05D004583 ORTHO05D005469 1.8e-272 942.2 550 87.6
Thhalv10001956m.g Eutrema salsugineum HOM05D004583 ORTHO05D005469 8.1e-249 863.6 548 81.6
Aa31LG5G9840 Aethionema arabicum HOM05D004583 ORTHO05D005469 3.4e-247 858.2 548 80.5
Sp4g05420 Schrenkiella parvula HOM05D004583 ORTHO05D005469 5.8e-247 857.4 548 81.8
CARHR115490 Cardamine hirsuta HOM05D004583 ORTHO05D005469 6.7e-243 844.0 492 86.6
BcaB08g35216 Brassica carinata HOM05D004583 ORTHO05D005469 1.1e-242 843.2 548 79.2
BolC3t15588H Brassica oleracea HOM05D004583 ORTHO05D005469 8.1e-241 837.0 548 79.7
A03p27060 Brassica napus HOM05D004583 ORTHO05D005469 3.1e-240 835.1 548 79.6
BraA03t11919Z Brassica rapa HOM05D004583 ORTHO05D005469 4.0e-240 834.7 548 79.4
C03p32470 Brassica napus HOM05D004583 ORTHO05D005469 3.4e-239 831.6 548 79.4
A09p55470 Brassica napus HOM05D004583 ORTHO05D005469 6.5e-230 800.8 550 76.0
BolC8t51418H Brassica oleracea HOM05D004583 ORTHO05D005469 4.5e-223 778.1 549 75.0
BcaC07g40848 Brassica carinata HOM05D004583 ORTHO05D005469 1.3e-222 776.5 550 74.7
THA.LOC104803803 Tarenaya hassleriana HOM05D004583 ORTHO05D005469 4.7e-212 741.5 551 71.0
C08p38460 Brassica napus HOM05D004583 ORTHO05D005469 2.2e-209 732.6 550 72.0
BraA09t40949Z Brassica rapa HOM05D004583 ORTHO05D005469 2.2e-209 732.6 513 75.0
BcaC01g04904 Brassica carinata HOM05D004583 ORTHO05D005469 9.1e-208 727.2 550 72.0
Cfa013385 Carpinus fangiana HOM05D004583 ORTHO05D005469 8.9e-179 630.9 559 60.6
Prupe.1G445300 Prunus persica HOM05D004583 ORTHO05D005469 1.7e-174 616.7 560 58.6
QL12p041048 Quercus lobata HOM05D004583 ORTHO05D005469 7.3e-173 611.3 565 58.9
GSVIVG01035292001 Vitis vinifera HOM05D004583 ORTHO05D005469 1.2e-172 610.5 561 58.6
TWI63G0012 Tripterygium wilfordii HOM05D004583 ORTHO05D005469 6.1e-172 608.2 561 58.8
Sc09g0009440 Simmondsia chinensis HOM05D004583 ORTHO05D005469 4.0e-171 605.5 564 59.0
Hma1.2p1_0049F.1_g028360 Hydrangea macrophylla HOM05D004583 ORTHO05D005469 7.5e-170 601.3 559 59.2
MD15G1090900 Malus domestica HOM05D004583 ORTHO05D005469 2.2e-169 599.7 562 58.4
Potri.018G046700 Populus trichocarpa HOM05D004583 ORTHO05D005469 3.7e-169 599.0 553 59.1
CSS0042231 Camellia sinensis var. sinensis HOM05D004583 ORTHO05D005469 1.1e-168 597.4 556 59.4
Ciclev10007949m.g Citrus clementina HOM05D004583 ORTHO05D005469 1.9e-168 596.7 556 58.6
PGR031G0432 Punica granatum HOM05D004583 ORTHO05D005469 2.4e-168 596.3 567 58.2
Potri.006G236400 Populus trichocarpa HOM05D004583 ORTHO05D005469 1.6e-167 593.6 557 58.5
MD08G1111400 Malus domestica HOM05D004583 ORTHO05D005469 3.0e-166 589.3 560 57.1
Nn6g35316 Nelumbo nucifera HOM05D004583 ORTHO05D005469 1.5e-165 587.0 570 57.4
Manes.16G073800 Manihot esculenta HOM05D004583 ORTHO05D005469 2.5e-165 586.3 555 57.7
ClCG08G012110 Citrullus lanatus HOM05D004583 ORTHO05D005469 3.3e-165 585.9 557 56.2
CANSAT25G3668 Cannabis sativa HOM05D004583 ORTHO05D005469 4.3e-165 585.5 556 56.8
CiPaw.08G027000 Carya illinoinensis HOM05D004583 ORTHO05D005469 1.8e-163 580.1 558 56.8
Sabra18G0045300 Salix brachista HOM05D004583 ORTHO05D005469 6.8e-163 578.2 571 56.2
TWI34G1497 Tripterygium wilfordii HOM05D004583 ORTHO05D005469 8.9e-163 577.8 556 57.0
DCAR_004462 Daucus carota HOM05D004583 ORTHO05D005469 1.5e-162 577.0 554 56.7
Sed0024833 Sechium edule HOM05D004583 ORTHO05D005469 1.5e-162 577.0 556 55.8
HanXRQChr11g0352321 Helianthus annuus HOM05D004583 ORTHO05D005469 3.4e-162 575.9 550 57.5
Hund03382 Selenicereus undatus HOM05D004583 ORTHO05D005469 5.8e-162 575.1 558 56.3
TAR636G0454 Trochodendron aralioides HOM05D004583 ORTHO05D005469 2.9e-161 572.8 567 55.2
Sabra06G0184800 Salix brachista HOM05D004583 ORTHO05D005469 6.4e-161 571.6 563 56.0
Actinidia15745 Actinidia chinensis HOM05D004583 ORTHO05D005469 1.4e-160 570.5 557 57.3
Lsat_1_v5_gn_1_42160 Lactuca sativa HOM05D004583 ORTHO05D005469 1.9e-160 570.1 547 57.0
Cc08_g09870 Coffea canephora HOM05D004583 ORTHO05D005469 2.4e-160 569.7 560 56.6
Sopen12g031740 Solanum pennellii HOM05D004583 ORTHO05D005469 4.1e-160 568.9 557 55.7
Solyc12g095840.2 Solanum lycopersicum HOM05D004583 ORTHO05D005469 9.2e-160 567.8 557 55.5
FvH4_2g35320 Fragaria vesca HOM05D004583 ORTHO05D005469 1.6e-159 567.0 560 55.9
RcHm_v2.0_Chr6g0306601 Rosa chinensis HOM05D004583 ORTHO05D005469 2.1e-159 566.6 557 56.0
Thecc.09G047500 Theobroma cacao HOM05D004583 ORTHO05D005469 1.3e-158 563.9 551 53.4
Peaxi162Scf00064g01528 Petunia axillaris HOM05D004583 ORTHO05D005469 1.7e-158 563.5 555 55.7
Eucgr.C00611 Eucalyptus grandis HOM05D004583 ORTHO05D005469 2.3e-158 563.1 558 56.1
FAN20G1421 Fragaria x ananassa HOM05D004583 ORTHO05D005469 3.9e-158 562.4 560 55.4
Gohir.A07G022241 Gossypium hirsutum HOM05D004583 ORTHO05D005469 6.6e-158 561.6 548 54.9
Gorai.001G026100 Gossypium raimondii HOM05D004583 ORTHO05D005469 1.1e-157 560.8 548 54.7
Medtr1g007160 Medicago truncatula HOM05D004583 ORTHO05D005469 1.5e-157 560.5 548 56.8
Nitab4.5_0001737g0070 Nicotiana tabacum HOM05D004583 ORTHO05D005469 1.5e-157 560.5 564 55.1
Gohir.D07G025000 Gossypium hirsutum HOM05D004583 ORTHO05D005469 2.5e-157 559.7 548 54.7
Nitab4.5_0001309g0070 Nicotiana tabacum HOM05D004583 ORTHO05D005469 6.2e-156 555.1 558 55.2
CAN.G208.65 Capsicum annuum HOM05D004583 ORTHO05D005469 8.1e-156 554.7 532 56.8
Lalb_Chr22g0361041 Lupinus albus HOM05D004583 ORTHO05D005469 1.2e-154 550.8 565 54.5
arahy.Tifrunner.gnm1.ann1.R6LPAT Arachis hypogaea HOM05D004583 ORTHO05D005469 7.6e-154 548.1 569 54.0
SHI18791 Sapria himalayana HOM05D004583 ORTHO05D005469 7.6e-154 548.1 558 53.6
CsaV3_2G030710 Cucumis sativus L. HOM05D004583 ORTHO05D005469 2.2e-153 546.6 557 54.6
Psat6g035200 Pisum sativum HOM05D004583 ORTHO05D005469 1.0e-150 537.7 560 52.9
FAN27G2572 Fragaria x ananassa HOM05D004583 ORTHO05D005469 3.9e-150 535.8 579 53.0
Rhsim02G0175400 Rhododendron simsii HOM05D004583 ORTHO05D005469 5.1e-150 535.4 553 54.2
PSO210G3632 Papaver somniferum HOM05D004583 ORTHO05D005469 1.1e-149 534.3 559 53.8
VMungo1309G0941 Vigna mungo HOM05D004583 ORTHO05D005469 3.3e-149 532.7 559 52.6
Migut.E01537 Erythranthe guttata HOM05D004583 ORTHO05D005469 3.6e-148 529.3 552 51.3
TPR.G24505 Trifolium pratense HOM05D004583 ORTHO05D005469 4.7e-148 528.9 563 53.5
AUR62009234 Chenopodium quinoa HOM05D004583 ORTHO05D005469 6.2e-148 528.5 574 53.1
ECA248G2390 Erigeron canadensis HOM05D004583 ORTHO05D005469 6.2e-148 528.5 558 52.2
TAR624G1263 Trochodendron aralioides HOM05D004583 ORTHO05D005469 6.2e-148 528.5 558 51.8
Duzib168G1134 Durio zibethinus HOM05D004583 ORTHO05D005469 1.8e-147 526.9 546 53.8
PSO210G2011 Papaver somniferum HOM05D004583 ORTHO05D005469 4.0e-147 525.8 558 53.8
Phvul.009G111600 Phaseolus vulgaris HOM05D004583 ORTHO05D005469 1.2e-146 524.2 558 52.3
EL10Ac2g03985 Beta vulgaris HOM05D004583 ORTHO05D005469 2.6e-146 523.1 578 52.9
AUR62041959 Chenopodium quinoa HOM05D004583 ORTHO05D005469 4.4e-146 522.3 613 51.1
MBI04_g20300_MAGBIO Magnolia biondii HOM05D004583 ORTHO05D005469 5.8e-146 521.9 554 51.4
Oeu038813.1 Olea europaea HOM05D004583 ORTHO05D005469 5.8e-146 521.9 576 51.0
Lj1g0018877 Lotus japonicus HOM05D004583 ORTHO05D005469 6.4e-145 518.5 562 52.1
Aqoxy7G03869 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 6.6e-142 508.4 569 52.0
Ca_15574_v3 Cicer arietinum L. HOM05D004583 ORTHO05D005469 1.9e-141 506.9 529 50.5
MELO3C011128.2 Cucumis melo HOM05D004583 ORTHO05D005469 1.9e-141 506.9 629 47.7
FAN15G2845 Fragaria x ananassa HOM05D004583 ORTHO05D005469 9.6e-141 504.6 563 52.9
AUR62041963 Chenopodium quinoa HOM05D004583 ORTHO05D005469 6.2e-140 501.9 579 50.9
ATR0705G143 Amborella trichopoda HOM05D004583 ORTHO05D005469 8.1e-140 501.5 582 49.3
MSTRG.14029 Avicennia marina HOM05D004583 ORTHO05D005469 4.0e-139 499.2 560 49.8
SGA_v2.0_scaffold169G38659 Striga asiatica HOM05D004583 ORTHO05D005469 6.9e-139 498.4 587 48.4
Medtr3g110340 Medicago truncatula HOM05D004583 ORTHO05D005469 2.6e-138 496.5 545 51.2
Psat5g020600 Pisum sativum HOM05D004583 ORTHO05D005469 1.9e-136 490.3 486 52.5
Lj7C698G10 Lonicera japonica HOM05D004583 ORTHO05D005469 7.1e-136 488.4 503 53.7
Glyma.04G086400 Glycine max HOM05D004583 ORTHO05D005469 3.9e-134 482.6 470 54.5
COL.COLO4_20995 Corchorus olitorius HOM05D004583 ORTHO05D005469 1.1e-133 481.1 504 53.2
Dinv23388 Davidia involucrata HOM05D004583 ORTHO05D005469 1.9e-133 480.3 489 56.4
CANSAT35G1178 Cannabis sativa HOM05D004583 ORTHO05D005469 4.3e-133 479.2 558 48.0
TPR.G12398 Trifolium pratense HOM05D004583 ORTHO05D005469 5.6e-133 478.8 548 49.5
Os05g0521500 Oryza sativa ssp. japonica HOM05D004583 ORTHO05D005469 1.1e-131 474.6 563 47.4
SalBow1G6079 Salvia bowleyana HOM05D004583 ORTHO05D005469 2.4e-131 473.4 613 44.5
arahy.Tifrunner.gnm1.ann1.6GB5J4 Arachis hypogaea HOM05D004583 ORTHO05D005469 4.9e-129 465.7 535 51.8
MSTRG.1664 Avicennia marina HOM05D004583 ORTHO05D005469 3.2e-128 463.0 477 50.9
Zm00001eb293710 Zea mays HOM05D004583 ORTHO05D005469 1.1e-125 454.5 574 46.3
arahy.Tifrunner.gnm1.ann1.M0YYQ7 Arachis hypogaea HOM05D004583 ORTHO05D005469 9.6e-125 451.4 484 50.4
unitig_32.g11475 Utricularia gibba HOM05D004583 ORTHO05D005469 2.1e-124 450.3 551 45.6
arahy.Tifrunner.gnm1.ann1.AK4U3Y Arachis hypogaea HOM05D004583 ORTHO05D005469 3.1e-123 446.4 519 48.6
Actinidia14686 Actinidia chinensis HOM05D004583 ORTHO05D005469 4.0e-123 446.0 559 48.7
vmacro11048 Vaccinium macrocarpon HOM05D004583 ORTHO05D005469 6.9e-123 445.3 519 48.9
Lalb_Chr23g0269711 Lupinus albus HOM05D004583 ORTHO05D005469 7.1e-120 435.3 489 48.5
CiPaw.07G202200 Carya illinoinensis HOM05D004583 ORTHO05D005469 9.6e-117 424.9 460 53.3
Aqoxy7G01424 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 3.7e-116 422.9 568 45.1
Os01g0743600 Oryza sativa ssp. japonica HOM05D004583 ORTHO05D005469 1.3e-113 414.5 543 44.9
Mapoly0168s0005 Marchantia polymorpha HOM05D004583 ORTHO05D005469 2.8e-108 396.7 542 43.5
HPP92_022971 Vanilla planifolia HOM05D004583 ORTHO05D005469 1.4e-107 394.4 450 49.1
Pp3c5_21890 Physcomitrium patens HOM05D004583 ORTHO05D005469 2.4e-107 393.7 587 39.5
Pp3c5_21897 Physcomitrium patens HOM05D004583 ORTHO05D005469 2.4e-107 393.7 587 39.5
Pp3c6_5840 Physcomitrium patens HOM05D004583 ORTHO05D005469 1.7e-105 387.5 574 40.8
Pp3c9_19040 Physcomitrium patens HOM05D004583 ORTHO05D005469 1.7e-105 387.5 581 40.8
Rhsim02G0175600 Rhododendron simsii HOM05D004583 ORTHO05D005469 1.4e-104 384.4 465 51.0
Pp3c15_22980 Physcomitrium patens HOM05D004583 ORTHO05D005469 9.4e-104 381.7 525 41.7
Haze_21911 Corylus avellana HOM05D004583 ORTHO05D005469 4.6e-103 379.4 311 61.4
DCAR_003076 Daucus carota HOM05D004583 ORTHO05D005469 8.8e-102 375.2 509 45.2
SMO238G0017 Selaginella moellendorffii HOM05D004583 ORTHO05D005469 3.4e-98 363.2 489 41.9
Zm00001eb153580 Zea mays HOM05D004583 ORTHO05D005469 1.0e-89 335.1 560 37.9
Atru.chr7.2059 Acer truncatum HOM05D004583 ORTHO05D005469 2.9e-89 333.6 320 56.9
CDE02G1982 Ceratophyllum demersum HOM05D004583 ORTHO05D001336 1.6e-82 311.2 361 47.6
SEGI_02523 Sequoiadendron giganteum HOM05D004583 ORTHO05D005469 9.4e-80 302.0 488 41.8
Pp3c16_16060 Physcomitrium patens HOM05D004583 ORTHO05D005469 2.7e-71 273.9 592 32.6
CBR_g21950 Chara braunii HOM05D004583 ORTHO05D005469 4.4e-69 266.5 705 30.1
MBI04_g32315_MAGBIO Magnolia biondii HOM05D004583 ORTHO05D005469 5.7e-69 266.2 181 66.3
Cpa.g.sc7.206 Carica papaya HOM05D004583 ORTHO05D005469 1.3e-68 265.0 168 73.8
Pp3c27_6400 Physcomitrium patens HOM05D004583 ORTHO05D005469 4.9e-68 263.1 626 33.1
AagrBONN_evm.TU.Sc2ySwM_117.1952 Anthoceros agrestis HOM05D004583 ORTHO05D005469 7.3e-64 249.2 465 38.3
Ah.10g034890 Amaranthus hybridus HOM05D004583 ORTHO05D005469 4.9e-60 236.5 393 43.3
Cpa.g.c37634 Carica papaya HOM05D004583 ORTHO05D005469 1.1e-48 198.7 256 48.8
Atru.chr7.2058 Acer truncatum HOM05D004583 ORTHO05D005469 3.1e-46 190.7 198 56.6
TPR.G9691 Trifolium pratense HOM05D004583 ORTHO05D005469 5.8e-45 186.4 188 48.4
Haze_21912 Corylus avellana HOM05D004583 ORTHO05D005469 1.5e-40 171.8 163 60.1
Aqoxy6G01950 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 3.8e-36 157.1 280 40.0
Glyma.06G087900 Glycine max HOM05D004583 ORTHO05D005469 6.4e-36 156.4 128 57.0
Lj4g0027824 Lotus japonicus HOM05D004583 ORTHO05D005469 3.5e-34 150.6 143 61.5
CDE02G3504 Ceratophyllum demersum HOM05D004583 ORTHO05D005469 6.0e-34 149.8 165 53.3
Ca_19225_v3 Cicer arietinum L. HOM05D004583 ORTHO05D005469 2.5e-32 144.4 176 51.7
MBI04_g42480_MAGBIO Magnolia biondii HOM05D004583 ORTHO05D005469 2.8e-31 141.0 159 52.2
Aqoxy6G01951 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 1.6e-26 125.2 94 63.8
Ca_12761_v3 Cicer arietinum L. HOM05D004583 ORTHO05D005469 1.1e-24 119.0 136 50.7
PRCOL_00000859 Prasinoderma coloniale HOM05D004583 ORTHO05D005469 1.8e-22 111.7 180 35.6
MCO16G603 Micromonas commoda HOM05D004583 ORTHO05D005469 2.0e-21 108.2 165 34.5
Duzib150G0365 Durio zibethinus HOM05D004583 ORTHO05D005469 3.2e-19 100.9 70 62.9
TPR.G7872 Trifolium pratense HOM05D004583 ORTHO05D005469 1.6e-15 88.6 104 44.2
HPP92_022972 Vanilla planifolia HOM05D004583 ORTHO05D005469 2.6e-13 81.3 106 47.2
Cpa.g.c46051 Carica papaya HOM05D004583 ORTHO05D005469 1.2e-10 72.4 39 79.5


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