Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G25720 Arabidopsis thaliana HOM05D007591 ORTHO05D009564 7.5e-51 203.8 118 100.0
AL4G17330 Arabidopsis lyrata HOM05D007591 ORTHO05D009564 1.4e-41 172.9 118 86.4
CARHR134910 Cardamine hirsuta HOM05D007591 ORTHO05D009564 1.9e-38 162.5 119 83.2
Carub.0001s3401 Capsella rubella HOM05D007591 ORTHO05D009564 9.5e-38 160.2 115 72.2
Thhalv10011878m.g Eutrema salsugineum HOM05D007591 ORTHO05D009564 8.9e-36 153.7 120 76.7
Aa31LG6G9200 Aethionema arabicum HOM05D007591 ORTHO05D009564 3.4e-35 151.8 123 67.5
SpUn0008_0030 Schrenkiella parvula HOM05D007591 ORTHO05D009564 3.4e-35 151.8 118 76.3
A04p11310 Brassica napus HOM05D007591 ORTHO05D009564 1.7e-31 139.4 126 68.3
BraA04t16792Z Brassica rapa HOM05D007591 ORTHO05D009564 1.7e-31 139.4 126 68.3
C04p45070 Brassica napus HOM05D007591 ORTHO05D009564 1.1e-30 136.7 118 69.5
BolC4t26085H Brassica oleracea HOM05D007591 ORTHO05D009564 1.1e-30 136.7 118 69.5
BcaB06g27212 Brassica carinata HOM05D007591 ORTHO05D009564 1.9e-30 136.0 119 68.9
THA.LOC104817210 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 4.3e-30 134.8 134 56.7
CAN.G1909.5 Capsicum annuum HOM05D007591 ORTHO05D009564 2.6e-27 125.6 121 62.8
PGR083G0752 Punica granatum HOM05D007591 ORTHO05D009564 3.4e-27 125.2 122 64.8
Peaxi162Scf00171g00034 Petunia axillaris HOM05D007591 ORTHO05D009564 7.6e-27 124.0 126 62.7
Nitab4.5_0004612g0010 Nicotiana tabacum HOM05D007591 ORTHO05D009564 3.8e-26 121.7 119 62.2
PGSC0003DMG400010159 Solanum tuberosum HOM05D007591 ORTHO05D009564 6.4e-26 120.9 121 64.5
Psat0s3092g0040 Pisum sativum HOM05D007591 ORTHO05D009564 8.4e-26 120.6 119 63.0
Potri.004G068400 Populus trichocarpa HOM05D007591 ORTHO05D009564 8.4e-26 120.6 119 59.7
Nn3g18513 Nelumbo nucifera HOM05D007591 ORTHO05D009564 1.4e-25 119.8 121 62.0
Sopen03g029150 Solanum pennellii HOM05D007591 ORTHO05D009564 1.9e-25 119.4 121 63.6
Nitab4.5_0001180g0270 Nicotiana tabacum HOM05D007591 ORTHO05D009564 2.4e-25 119.0 122 59.8
Solyc03g098410.1 Solanum lycopersicum HOM05D007591 ORTHO05D009564 2.4e-25 119.0 121 63.6
SalBow5G5001 Salvia bowleyana HOM05D007591 ORTHO05D009564 4.2e-25 118.2 120 64.2
Oeu001600.1 Olea europaea HOM05D007591 ORTHO05D009564 9.3e-25 117.1 118 56.8
Migut.O00251 Erythranthe guttata HOM05D007591 ORTHO05D009564 1.2e-24 116.7 120 66.7
Duzib091G0002 Durio zibethinus HOM05D007591 ORTHO05D009564 1.6e-24 116.3 121 57.0
Gohir.A02G020402 Gossypium hirsutum HOM05D007591 ORTHO05D009564 1.6e-24 116.3 120 58.3
TWI15G0768 Tripterygium wilfordii HOM05D007591 ORTHO05D009564 2.1e-24 115.9 121 63.6
Gohir.D02G024000 Gossypium hirsutum HOM05D007591 ORTHO05D009564 2.7e-24 115.5 121 56.2
Gorai.005G030000 Gossypium raimondii HOM05D007591 ORTHO05D009564 2.7e-24 115.5 121 56.2
HanXRQChr17g0560331 Helianthus annuus HOM05D007591 ORTHO05D009564 2.7e-24 115.5 125 60.0
Medtr6g036570 Medicago truncatula HOM05D007591 ORTHO05D009564 2.7e-24 115.5 120 65.8
Haze_18422 Corylus avellana HOM05D007591 ORTHO05D009564 3.5e-24 115.2 128 58.6
DCAR_014000 Daucus carota HOM05D007591 ORTHO05D009564 3.5e-24 115.2 119 60.5
Sabra04G0046100 Salix brachista HOM05D007591 ORTHO05D009564 3.5e-24 115.2 118 58.5
Ca_25920_v3 Cicer arietinum L. HOM05D007591 ORTHO05D009564 4.6e-24 114.8 119 62.2
Dinv01404 Davidia involucrata HOM05D007591 ORTHO05D009564 6.0e-24 114.4 127 56.7
PSO063G6315 Papaver somniferum HOM05D007591 ORTHO05D009564 6.0e-24 114.4 129 64.3
TAR622G1019 Trochodendron aralioides HOM05D007591 ORTHO05D009564 7.8e-24 114.0 120 57.5
Cpa.g.sc36.38 Carica papaya HOM05D007591 ORTHO05D009564 1.0e-23 113.6 118 57.6
MBI06_g28831_MAGBIO Magnolia biondii HOM05D007591 ORTHO05D009564 1.0e-23 113.6 121 58.7
Sc10g0009060 Simmondsia chinensis HOM05D007591 ORTHO05D009564 1.0e-23 113.6 116 59.5
Glyma.08G057500 Glycine max HOM05D007591 ORTHO05D009564 3.0e-23 112.1 130 59.2
Phvul.002G333300 Phaseolus vulgaris HOM05D007591 ORTHO05D009564 3.0e-23 112.1 131 58.8
MSTRG.23207 Avicennia marina HOM05D007591 ORTHO05D009564 3.9e-23 111.7 121 54.5
FAN04G1638 Fragaria x ananassa HOM05D007591 ORTHO05D009564 5.1e-23 111.3 118 59.3
EL10Ac8g19512 Beta vulgaris HOM05D007591 ORTHO05D009564 8.7e-23 110.5 121 63.6
Lalb_Chr05g0221361 Lupinus albus HOM05D007591 ORTHO05D009564 8.7e-23 110.5 127 62.2
QL07p035218 Quercus lobata HOM05D007591 ORTHO05D009564 8.7e-23 110.5 125 58.4
Prupe.5G241900 Prunus persica HOM05D007591 ORTHO05D009564 1.5e-22 109.8 127 59.8
Thecc.04G198100 Theobroma cacao HOM05D007591 ORTHO05D009564 1.5e-22 109.8 122 61.5
Cc04_g08740 Coffea canephora HOM05D007591 ORTHO05D009564 1.9e-22 109.4 119 63.0
Manes.02G219300 Manihot esculenta HOM05D007591 ORTHO05D009564 2.5e-22 109.0 119 63.9
Ciclev10022902m.g Citrus clementina HOM05D007591 ORTHO05D009564 3.3e-22 108.6 121 66.1
CiPaw.16G070000 Carya illinoinensis HOM05D007591 ORTHO05D009564 5.6e-22 107.8 127 55.9
Actinidia35144 Actinidia chinensis HOM05D007591 ORTHO05D009564 7.3e-22 107.5 128 55.5
COL.COLO4_20200 Corchorus olitorius HOM05D007591 ORTHO05D009564 7.3e-22 107.5 121 61.2
Eucgr.H00568 Eucalyptus grandis HOM05D007591 ORTHO05D009564 7.3e-22 107.5 137 54.0
HPP92_005097 Vanilla planifolia HOM05D007591 ORTHO05D009564 7.3e-22 107.5 126 53.2
arahy.Tifrunner.gnm1.ann1.T0CPW9 Arachis hypogaea HOM05D007591 ORTHO05D009564 9.6e-22 107.1 118 59.3
Aqoxy3G04178 Aquilegia oxysepala HOM05D007591 ORTHO05D009564 1.3e-21 106.7 122 58.2
SHI12607 Sapria himalayana HOM05D007591 ORTHO05D009564 1.3e-21 106.7 119 50.4
ECA234G2981 Erigeron canadensis HOM05D007591 ORTHO05D009564 1.6e-21 106.3 126 60.3
Lsat_1_v5_gn_4_52441 Lactuca sativa HOM05D007591 ORTHO05D009564 2.1e-21 105.9 130 61.5
RcHm_v2.0_Chr7g0177391 Rosa chinensis HOM05D007591 ORTHO05D009564 2.8e-21 105.5 133 62.4
CsaV3_1G005150 Cucumis sativus L. HOM05D007591 ORTHO05D009564 3.6e-21 105.1 124 57.3
FAN18G3921 Fragaria x ananassa HOM05D007591 ORTHO05D009564 3.6e-21 105.1 131 60.3
FvH4_5g18200 Fragaria vesca HOM05D007591 ORTHO05D009564 8.1e-21 104.0 129 58.1
Ah.09g232230 Amaranthus hybridus HOM05D007591 ORTHO05D009564 1.1e-20 103.6 125 59.2
ClCG04G012550 Citrullus lanatus HOM05D007591 ORTHO05D009564 1.1e-20 103.6 122 59.0
ATR0807G077 Amborella trichopoda HOM05D007591 ORTHO05D009564 1.4e-20 103.2 126 56.3
MELO3C001953.2 Cucumis melo HOM05D007591 ORTHO05D009564 3.1e-20 102.1 124 58.9
Hma1.2p1_1404F.1_g281340 Hydrangea macrophylla HOM05D007591 ORTHO05D009564 3.1e-20 102.1 130 56.2
CSS0020209 Camellia sinensis var. sinensis HOM05D007591 ORTHO05D009564 5.3e-20 101.3 130 53.1
arahy.Tifrunner.gnm1.ann1.B1XHC0 Arachis hypogaea HOM05D007591 ORTHO05D009564 6.9e-20 100.9 119 63.0
FAN13G0294 Fragaria x ananassa HOM05D007591 ORTHO05D009564 6.9e-20 100.9 121 57.0
LjContig00484g0016765 Lotus japonicus HOM05D007591 ORTHO05D009564 6.9e-20 100.9 128 60.9
Sed0023620 Sechium edule HOM05D007591 ORTHO05D009564 6.9e-20 100.9 124 54.8
Atru.chr9.1591 Acer truncatum HOM05D007591 ORTHO05D009564 1.2e-19 100.1 126 54.8
SpUn0123_0020 Schrenkiella parvula HOM05D007591 ORTHO05D009564 2.6e-19 99.0 54 87.0
MD14G1244400 Malus domestica HOM05D007591 ORTHO05D009564 2.2e-18 95.9 126 54.8
Rhsim12G0136500 Rhododendron simsii HOM05D007591 ORTHO05D009564 2.2e-18 95.9 126 57.9
unitig_22.g5435 Utricularia gibba HOM05D007591 ORTHO05D009564 1.1e-17 93.6 111 59.5
AUR62033202 Chenopodium quinoa HOM05D007591 ORTHO05D009564 5.4e-17 91.3 120 50.8
AUR62008565 Chenopodium quinoa HOM05D007591 ORTHO05D009564 1.2e-16 90.1 120 50.0
SEGI_35599 Sequoiadendron giganteum HOM05D007591 ORTHO05D009564 3.5e-16 88.6 118 44.9
Pp3c23_22030 Physcomitrium patens HOM05D007591 ORTHO05D009564 7.9e-16 87.4 119 49.6
Zm00001eb429080 Zea mays HOM05D007591 ORTHO05D009564 1.3e-15 86.7 125 48.0
Mapoly0020s0124 Marchantia polymorpha HOM05D007591 ORTHO05D009564 8.7e-15 84.0 133 40.6
CDE07G1474 Ceratophyllum demersum HOM05D007591 ORTHO05D009564 2.5e-14 82.4 103 47.6
THA.LOC104813140 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 2.5e-14 82.4 113 46.0
CAN.G1909.8 Capsicum annuum HOM05D007591 ORTHO05D009564 2.4e-12 75.9 54 70.4
CBR_g12703 Chara braunii HOM05D007591 ORTHO05D009564 3.4e-11 72.0 123 46.3
Medtr6g036573 Medicago truncatula HOM05D007591 ORTHO05D009564 2.2e-10 69.3 41 78.0
Atru.chr5.956 Acer truncatum HOM05D007591 ORTHO05D009564 6.0e-08 61.2 76 48.7
Os04g0566000 Oryza sativa ssp. japonica HOM05D007591 ORTHO05D009564 1.3e-07 60.1 47 63.8


User provided reference genes

Program Settings