Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G25605 Arabidopsis thaliana HOM05D007351 ORTHO05D009386 5.1e-116 421.0 201 100.0
AL4G17070 Arabidopsis lyrata HOM05D007351 ORTHO05D009386 1.3e-106 389.8 201 94.0
Carub.0004s0533 Capsella rubella HOM05D007351 ORTHO05D009386 1.3e-106 389.8 201 93.5
CARHR115710 Cardamine hirsuta HOM05D007351 ORTHO05D009386 1.4e-105 386.3 201 92.5
A04p19820 Brassica napus HOM05D007351 ORTHO05D009386 6.9e-105 384.0 202 94.1
BraA04t17570Z Brassica rapa HOM05D007351 ORTHO05D009386 9.0e-105 383.6 202 94.1
BcaC02g08337 Brassica carinata HOM05D007351 ORTHO05D009386 2.0e-104 382.5 202 94.1
C04p55560 Brassica napus HOM05D007351 ORTHO05D009386 2.0e-104 382.5 202 94.1
BolC4t27080H Brassica oleracea HOM05D007351 ORTHO05D009386 2.0e-104 382.5 202 94.1
BcaB06g28079 Brassica carinata HOM05D007351 ORTHO05D009386 1.4e-102 376.3 202 92.1
Thhalv10000330m.g Eutrema salsugineum HOM05D007351 ORTHO05D009386 5.5e-102 374.4 201 91.0
Aa31sc586G10 Aethionema arabicum HOM05D007351 ORTHO05D009386 5.7e-99 364.4 201 88.1
THA.LOC104804500 Tarenaya hassleriana HOM05D007351 ORTHO05D009386 5.7e-91 337.8 200 83.0
arahy.Tifrunner.gnm1.ann1.C4YKET Arachis hypogaea HOM05D007351 ORTHO05D009386 1.1e-86 323.6 201 75.1
Sabra06G0194800 Salix brachista HOM05D007351 ORTHO05D009386 2.5e-86 322.4 204 77.9
Thecc.09G147600 Theobroma cacao HOM05D007351 ORTHO05D009386 2.5e-86 322.4 195 80.0
GSVIVG01035772001 Vitis vinifera HOM05D007351 ORTHO05D009386 2.5e-86 322.4 204 77.9
Eucgr.C01805 Eucalyptus grandis HOM05D007351 ORTHO05D009386 3.2e-86 322.0 168 87.5
Prupe.1G471900 Prunus persica HOM05D007351 ORTHO05D009386 5.5e-86 321.2 166 87.3
Potri.006G249000 Populus trichocarpa HOM05D007351 ORTHO05D009386 7.2e-86 320.9 201 76.6
COL.COLO4_24001 Corchorus olitorius HOM05D007351 ORTHO05D009386 1.2e-85 320.1 167 88.0
Atru.chr7.2359 Acer truncatum HOM05D007351 ORTHO05D009386 3.6e-85 318.5 171 85.4
MD08G1141900 Malus domestica HOM05D007351 ORTHO05D009386 4.7e-85 318.2 168 86.3
TWI34G1290 Tripterygium wilfordii HOM05D007351 ORTHO05D009386 6.1e-85 317.8 204 74.5
Ca_15711_v3 Cicer arietinum L. HOM05D007351 ORTHO05D009386 8.0e-85 317.4 201 75.1
Nn2g11909 Nelumbo nucifera HOM05D007351 ORTHO05D009386 1.0e-84 317.0 166 86.7
CiPaw.08G014100 Carya illinoinensis HOM05D007351 ORTHO05D009386 1.8e-84 316.2 164 87.2
Ciclev10009550m.g Citrus clementina HOM05D007351 ORTHO05D009386 1.8e-84 316.2 169 87.6
Medtr3g107860 Medicago truncatula HOM05D007351 ORTHO05D009386 2.3e-84 315.8 201 73.1
Gorai.004G110800 Gossypium raimondii HOM05D007351 ORTHO05D009386 3.0e-84 315.5 167 87.4
TAR625G1337 Trochodendron aralioides HOM05D007351 ORTHO05D009386 5.2e-84 314.7 166 85.5
FAN24G0983 Fragaria x ananassa HOM05D007351 ORTHO05D009386 6.7e-84 314.3 201 76.1
Lj8A616G46 Lonicera japonica HOM05D007351 ORTHO05D009386 8.8e-84 313.9 203 75.4
Lj1g0014043 Lotus japonicus HOM05D007351 ORTHO05D009386 1.1e-83 313.5 201 73.1
Cpa.g.sc91.32 Carica papaya HOM05D007351 ORTHO05D009386 1.5e-83 313.2 213 73.7
FvH4_2g29770 Fragaria vesca HOM05D007351 ORTHO05D009386 2.0e-83 312.8 201 75.1
FAN27G2935 Fragaria x ananassa HOM05D007351 ORTHO05D009386 2.0e-83 312.8 201 74.6
Psat5g027160 Pisum sativum HOM05D007351 ORTHO05D009386 2.0e-83 312.8 201 73.6
Manes.16G118400 Manihot esculenta HOM05D007351 ORTHO05D009386 2.6e-83 312.4 166 84.3
PSO170G0157 Papaver somniferum HOM05D007351 ORTHO05D009386 2.6e-83 312.4 174 84.5
PSO017G1621 Papaver somniferum HOM05D007351 ORTHO05D009386 3.3e-83 312.0 174 83.9
RcHm_v2.0_Chr6g0298791 Rosa chinensis HOM05D007351 ORTHO05D009386 3.3e-83 312.0 166 84.9
Actinidia15698 Actinidia chinensis HOM05D007351 ORTHO05D009386 5.7e-83 311.2 201 74.6
arahy.Tifrunner.gnm1.ann1.8MNE4Q Arachis hypogaea HOM05D007351 ORTHO05D009386 7.4e-83 310.8 222 68.0
EL10Ac2g02569 Beta vulgaris HOM05D007351 ORTHO05D009386 7.4e-83 310.8 205 74.6
FAN15G3188 Fragaria x ananassa HOM05D007351 ORTHO05D009386 7.4e-83 310.8 201 74.6
Hma1.2p1_0000F.1_g000940 Hydrangea macrophylla HOM05D007351 ORTHO05D009386 9.7e-83 310.5 190 77.4
Gohir.A08G090000 Gossypium hirsutum HOM05D007351 ORTHO05D009386 3.7e-82 308.5 188 77.1
MBI04_g00950_MAGBIO Magnolia biondii HOM05D007351 ORTHO05D009386 3.7e-82 308.5 198 73.2
CSS0046405 Camellia sinensis var. sinensis HOM05D007351 ORTHO05D009386 6.3e-82 307.8 166 84.9
Sc06g0000580 Simmondsia chinensis HOM05D007351 ORTHO05D009386 6.3e-82 307.8 191 77.0
Cc11_g01660 Coffea canephora HOM05D007351 ORTHO05D009386 1.1e-81 307.0 201 74.6
Glyma.06G071600 Glycine max HOM05D007351 ORTHO05D009386 1.1e-81 307.0 201 72.1
TPR.G27335 Trifolium pratense HOM05D007351 ORTHO05D009386 5.3e-81 304.7 197 73.1
AUR62032351 Chenopodium quinoa HOM05D007351 ORTHO05D009386 1.2e-80 303.5 213 71.4
Lalb_Chr23g0268831 Lupinus albus HOM05D007351 ORTHO05D009386 1.6e-80 303.1 166 81.9
Phvul.009G096100 Phaseolus vulgaris HOM05D007351 ORTHO05D009386 1.6e-80 303.1 201 71.6
Nitab4.5_0000508g0220 Nicotiana tabacum HOM05D007351 ORTHO05D009386 2.0e-80 302.8 201 72.6
Glyma.04G069700 Glycine max HOM05D007351 ORTHO05D009386 2.6e-80 302.4 201 70.6
Aqoxy7G02003 Aquilegia oxysepala HOM05D007351 ORTHO05D009386 7.7e-80 300.8 213 69.5
Migut.A00300 Erythranthe guttata HOM05D007351 ORTHO05D009386 2.2e-79 299.3 168 81.0
Peaxi162Scf00251g01128 Petunia axillaris HOM05D007351 ORTHO05D009386 2.2e-79 299.3 167 80.8
MSTRG.11754 Avicennia marina HOM05D007351 ORTHO05D009386 2.9e-79 298.9 168 81.0
Solyc08g067430.4 Solanum lycopersicum HOM05D007351 ORTHO05D009386 6.5e-79 297.7 201 71.6
PGSC0003DMG400007382 Solanum tuberosum HOM05D007351 ORTHO05D009386 6.5e-79 297.7 201 71.6
Hund03010 Selenicereus undatus HOM05D007351 ORTHO05D009386 1.1e-78 297.0 189 76.2
HanXRQChr13g0402411 Helianthus annuus HOM05D007351 ORTHO05D009386 1.9e-78 296.2 189 75.7
Rhsim07G0150700 Rhododendron simsii HOM05D007351 ORTHO05D009386 4.2e-78 295.0 213 69.5
SGA_v2.0_scaffold448G51771 Striga asiatica HOM05D007351 ORTHO05D009386 9.4e-78 293.9 172 79.1
ECA233G0102 Erigeron canadensis HOM05D007351 ORTHO05D009386 1.6e-77 293.1 167 80.2
Lsat_1_v5_gn_6_21681 Lactuca sativa HOM05D007351 ORTHO05D009386 6.1e-77 291.2 166 80.1
MELO3C003678.2 Cucumis melo HOM05D007351 ORTHO05D009386 1.0e-76 290.4 165 78.2
Sed0005695 Sechium edule HOM05D007351 ORTHO05D009386 1.4e-76 290.0 198 67.7
ATR0680G179 Amborella trichopoda HOM05D007351 ORTHO05D009386 3.0e-76 288.9 170 80.0
Os05g0574700 Oryza sativa ssp. japonica HOM05D007351 ORTHO05D009386 3.0e-76 288.9 174 76.4
Nitab4.5_0002339g0070 Nicotiana tabacum HOM05D007351 ORTHO05D009386 6.7e-76 287.7 204 70.1
CDE06G1133 Ceratophyllum demersum HOM05D007351 ORTHO05D009386 2.6e-75 285.8 169 80.5
unitig_32.g11667 Utricularia gibba HOM05D007351 ORTHO05D009386 3.3e-75 285.4 168 79.2
vmacro05202 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 5.7e-75 284.6 153 84.3
Sopen08g021360 Solanum pennellii HOM05D007351 ORTHO05D009386 9.7e-75 283.9 201 69.2
Sp4g05090 Schrenkiella parvula HOM05D007351 ORTHO05D009386 1.3e-74 283.5 140 95.0
VMungo1309G2796 Vigna mungo HOM05D007351 ORTHO05D009386 1.3e-71 273.5 212 66.0
AUR62041846 Chenopodium quinoa HOM05D007351 ORTHO05D009386 6.5e-71 271.2 164 79.3
Duzib150G1343 Durio zibethinus HOM05D007351 ORTHO05D009386 8.0e-69 264.2 169 78.1
Gohir.D08G102800 Gossypium hirsutum HOM05D007351 ORTHO05D009386 1.2e-67 260.4 142 85.2
PGR031G1798 Punica granatum HOM05D007351 ORTHO05D009386 3.4e-67 258.8 182 71.4
QL12p031742 Quercus lobata HOM05D007351 ORTHO05D009386 7.5e-67 257.7 171 74.9
CsaV3_3G046600 Cucumis sativus L. HOM05D007351 ORTHO05D009386 1.3e-66 256.9 141 80.9
SEGI_27006 Sequoiadendron giganteum HOM05D007351 ORTHO05D009386 1.7e-66 256.5 172 68.6
CANSAT11G2455 Cannabis sativa HOM05D007351 ORTHO05D009386 2.3e-63 246.1 166 69.3
DCAR_003046 Daucus carota HOM05D007351 ORTHO05D009386 5.0e-63 245.0 143 80.4
Mapoly0036s0071 Marchantia polymorpha HOM05D007351 ORTHO05D009386 1.5e-62 243.4 167 65.9
Zm00001eb344390 Zea mays HOM05D007351 ORTHO05D009386 1.6e-61 240.0 138 79.0
Pp3c17_16830 Physcomitrium patens HOM05D007351 ORTHO05D009386 2.3e-60 236.1 177 64.4
SMO269G0024 Selaginella moellendorffii HOM05D007351 ORTHO05D009386 4.4e-59 231.9 154 68.8
Oeu045191.1 Olea europaea HOM05D007351 ORTHO05D009386 2.4e-57 226.1 180 64.4
Haze_21592 Corylus avellana HOM05D007351 ORTHO05D009386 3.1e-57 225.7 111 91.0
AagrBONN_evm.TU.Sc2ySwM_228.1243 Anthoceros agrestis HOM05D007351 ORTHO05D009386 3.5e-56 222.2 152 69.1
CBR_g40414 Chara braunii HOM05D007351 ORTHO05D009386 8.6e-47 191.0 154 57.8
CANSAT54G2502 Cannabis sativa HOM05D007351 ORTHO05D009386 9.5e-46 187.6 137 65.7
Cre17.g746897 Chlamydomonas reinhardtii HOM05D007351 ORTHO05D009386 6.2e-29 131.7 140 44.3
vmacro05206 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 1.1e-17 94.4 165 38.2
Pp3c16_22900 Physcomitrium patens HOM05D033550 ORTHO05D017832 3.8e-10 69.3 133 35.3
Lsat_1_v5_gn_4_127141 Lactuca sativa HOM05D007351 ORTHO05D009386 4.2e-09 65.9 37 75.7
SEGI_25541 Sequoiadendron giganteum HOM05D007351 ORTHO05D017832 3.0e-07 59.7 137 31.4
Mapoly0006s0206 Marchantia polymorpha HOM05D017363 ORTHO05D018319 6.7e-07 58.5 165 23.6
SMO356G0529 Selaginella moellendorffii HOM05D017363 ORTHO05D018319 1.5e-06 57.4 179 29.1


User provided reference genes

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