Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G25280 Arabidopsis thaliana HOM05D005419 ORTHO05D007365 2.6e-169 598.6 292 100.0
AL4G16610 Arabidopsis lyrata HOM05D005419 ORTHO05D007365 1.1e-164 583.2 292 97.3
Carub.0004s0490 Capsella rubella HOM05D005419 ORTHO05D007365 3.3e-164 581.6 292 96.6
Thhalv10000272m.g Eutrema salsugineum HOM05D005419 ORTHO05D007365 2.6e-161 572.0 292 94.9
BcaB08g35172 Brassica carinata HOM05D005419 ORTHO05D007365 5.4e-159 564.3 292 93.2
Sp4g04430 Schrenkiella parvula HOM05D005419 ORTHO05D007365 1.0e-157 560.1 292 92.8
BcaB06g28051 Brassica carinata HOM05D005419 ORTHO05D007365 2.1e-155 552.4 290 91.7
A04p19650 Brassica napus HOM05D005419 ORTHO05D007365 6.2e-155 550.8 290 91.4
BraA04t17556Z Brassica rapa HOM05D005419 ORTHO05D007365 6.2e-155 550.8 290 91.4
BolC4t27063H Brassica oleracea HOM05D005419 ORTHO05D007365 2.4e-154 548.9 292 91.1
A09p55730 Brassica napus HOM05D005419 ORTHO05D007365 5.3e-154 547.7 290 90.3
C04p55260 Brassica napus HOM05D005419 ORTHO05D007365 5.3e-154 547.7 292 90.8
BraA09t40974Z Brassica rapa HOM05D005419 ORTHO05D007365 5.3e-154 547.7 290 90.3
BcaC02g08359 Brassica carinata HOM05D005419 ORTHO05D007365 1.2e-153 546.6 292 90.4
C08p38730 Brassica napus HOM05D005419 ORTHO05D007365 2.0e-153 545.8 290 90.0
BolC8t51443H Brassica oleracea HOM05D005419 ORTHO05D007365 2.0e-153 545.8 290 90.0
BcaC07g40875 Brassica carinata HOM05D005419 ORTHO05D007365 4.4e-153 544.7 287 90.6
Aa31sc229G10 Aethionema arabicum HOM05D005419 ORTHO05D007365 2.2e-152 542.3 292 88.4
CARHR116260 Cardamine hirsuta HOM05D005419 ORTHO05D007365 6.2e-147 524.2 294 86.1
THA.LOC104805589 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 5.8e-145 517.7 292 85.3
PGR119G2552 Punica granatum HOM05D005419 ORTHO05D007365 4.2e-143 511.5 292 82.5
Sed0010362 Sechium edule HOM05D005419 ORTHO05D007365 2.1e-142 509.2 290 82.1
MD15G1129200 Malus domestica HOM05D005419 ORTHO05D007365 7.9e-142 507.3 292 81.2
RcHm_v2.0_Chr6g0297381 Rosa chinensis HOM05D005419 ORTHO05D007365 1.3e-141 506.5 292 81.2
TWI34G1484 Tripterygium wilfordii HOM05D005419 ORTHO05D007365 1.8e-141 506.1 292 81.5
Atru.chr7.2482 Acer truncatum HOM05D005419 ORTHO05D007365 6.7e-141 504.2 290 80.7
Duzib150G0083 Durio zibethinus HOM05D005419 ORTHO05D007365 8.7e-141 503.8 292 81.2
CiPaw.07G226000 Carya illinoinensis HOM05D005419 ORTHO05D007365 1.1e-140 503.4 292 80.5
EL10Ac2g04167 Beta vulgaris HOM05D005419 ORTHO05D007365 1.5e-140 503.1 292 82.2
FvH4_2g28610 Fragaria vesca HOM05D005419 ORTHO05D007365 1.9e-140 502.7 292 80.8
FAN24G2053 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.9e-140 502.7 292 80.8
Dinv15871 Davidia involucrata HOM05D005419 ORTHO05D007365 3.3e-140 501.9 292 80.1
FAN20G2331 Fragaria x ananassa HOM05D005419 ORTHO05D007365 4.3e-140 501.5 292 80.5
Phvul.001G049700 Phaseolus vulgaris HOM05D005419 ORTHO05D007365 5.6e-140 501.1 288 79.9
CsaV3_2G032220 Cucumis sativus L. HOM05D005419 ORTHO05D007365 1.3e-139 500.0 292 80.1
Manes.16G125000 Manihot esculenta HOM05D005419 ORTHO05D007365 1.3e-139 500.0 292 79.8
MELO3C011274.2 Cucumis melo HOM05D005419 ORTHO05D007365 1.6e-139 499.6 292 80.8
Eucgr.K02838 Eucalyptus grandis HOM05D005419 ORTHO05D007365 2.1e-139 499.2 292 79.5
Hma1.2p1_0974F.1_g243070 Hydrangea macrophylla HOM05D005419 ORTHO05D007365 2.1e-139 499.2 292 80.5
QL02p020871 Quercus lobata HOM05D005419 ORTHO05D007365 2.1e-139 499.2 290 80.3
Cfa013117 Carpinus fangiana HOM05D005419 ORTHO05D007365 3.7e-139 498.4 292 79.5
CANSAT25G3306 Cannabis sativa HOM05D005419 ORTHO05D007365 4.8e-139 498.0 289 80.3
Gorai.010G116600 Gossypium raimondii HOM05D005419 ORTHO05D007365 4.8e-139 498.0 292 80.1
MD08G1152600 Malus domestica HOM05D005419 ORTHO05D007365 4.8e-139 498.0 292 80.1
Gohir.D05G058700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 6.2e-139 497.7 292 79.8
Gorai.009G059800 Gossypium raimondii HOM05D005419 ORTHO05D007365 6.2e-139 497.7 292 79.8
VMungo0647G0032 Vigna mungo HOM05D005419 ORTHO05D007365 6.2e-139 497.7 288 79.5
CSS0019044 Camellia sinensis var. sinensis HOM05D005419 ORTHO05D007365 8.1e-139 497.3 292 79.8
Ciclev10009082m.g Citrus clementina HOM05D005419 ORTHO05D007365 1.1e-138 496.9 292 79.8
Gohir.A06G099500 Gossypium hirsutum HOM05D005419 ORTHO05D007365 1.1e-138 496.9 292 79.8
Potri.018G023700 Populus trichocarpa HOM05D005419 ORTHO05D007365 1.1e-138 496.9 292 80.1
ECA248G3461 Erigeron canadensis HOM05D005419 ORTHO05D007365 1.4e-138 496.5 290 80.7
Glyma.14G113800 Glycine max HOM05D005419 ORTHO05D007365 1.8e-138 496.1 288 79.5
Medtr1g012830 Medicago truncatula HOM05D005419 ORTHO05D007365 2.4e-138 495.7 288 79.9
Thecc.09G020800 Theobroma cacao HOM05D005419 ORTHO05D007365 3.1e-138 495.4 294 79.9
GSVIVG01035939001 Vitis vinifera HOM05D005419 ORTHO05D007365 3.1e-138 495.4 292 78.8
Cc08_g00340 Coffea canephora HOM05D005419 ORTHO05D007365 5.3e-138 494.6 292 79.1
TAR383G1021 Trochodendron aralioides HOM05D005419 ORTHO05D007365 5.3e-138 494.6 290 79.7
Gohir.D06G101700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 6.9e-138 494.2 292 79.5
Peaxi162Scf00935g00015 Petunia axillaris HOM05D005419 ORTHO05D007365 9.0e-138 493.8 292 79.8
SalBow4G1212 Salvia bowleyana HOM05D005419 ORTHO05D007365 9.0e-138 493.8 292 80.1
Nn2g12192 Nelumbo nucifera HOM05D005419 ORTHO05D007365 1.2e-137 493.4 290 80.3
arahy.Tifrunner.gnm1.ann1.2DG9CD Arachis hypogaea HOM05D005419 ORTHO05D007365 2.0e-137 492.7 287 80.1
arahy.Tifrunner.gnm1.ann1.X3TF0E Arachis hypogaea HOM05D005419 ORTHO05D007365 2.0e-137 492.7 287 80.1
Ca_13036_v3 Cicer arietinum L. HOM05D005419 ORTHO05D007365 2.0e-137 492.7 288 79.2
DCAR_003104 Daucus carota HOM05D005419 ORTHO05D007365 2.0e-137 492.7 290 78.6
Lj5g0012746 Lotus japonicus HOM05D005419 ORTHO05D007365 2.6e-137 492.3 288 79.2
TPR.G14021 Trifolium pratense HOM05D005419 ORTHO05D007365 4.5e-137 491.5 287 79.4
Psat6g028000 Pisum sativum HOM05D005419 ORTHO05D007365 1.0e-136 490.3 288 79.2
PSO210G4598 Papaver somniferum HOM05D005419 ORTHO05D007365 1.3e-136 490.0 293 78.2
Aqoxy7G03594 Aquilegia oxysepala HOM05D005419 ORTHO05D007365 1.7e-136 489.6 290 79.7
Nitab4.5_0014723g0010 Nicotiana tabacum HOM05D005419 ORTHO05D007365 1.7e-136 489.6 292 79.8
MSTRG.26021 Avicennia marina HOM05D005419 ORTHO05D007365 4.9e-136 488.0 289 78.9
Cpa.g.sc187.13 Carica papaya HOM05D005419 ORTHO05D007365 4.9e-136 488.0 290 79.0
AUR62012434 Chenopodium quinoa HOM05D005419 ORTHO05D007365 4.9e-136 488.0 290 79.0
AUR62031558 Chenopodium quinoa HOM05D005419 ORTHO05D007365 2.5e-135 485.7 289 79.2
Actinidia14096 Actinidia chinensis HOM05D005419 ORTHO05D007365 5.5e-135 484.6 280 80.0
FAN27G2423 Fragaria x ananassa HOM05D005419 ORTHO05D007365 9.3e-135 483.8 292 78.8
HanXRQChr13g0387991 Helianthus annuus HOM05D005419 ORTHO05D007365 9.3e-135 483.8 290 79.0
Potri.006G258200 Populus trichocarpa HOM05D005419 ORTHO05D007365 1.6e-134 483.0 292 79.1
Solyc08g029110.3 Solanum lycopersicum HOM05D005419 ORTHO05D007365 2.7e-134 482.3 290 79.3
Sopen08g010000 Solanum pennellii HOM05D005419 ORTHO05D007365 2.7e-134 482.3 290 79.3
Migut.A00016 Erythranthe guttata HOM05D005419 ORTHO05D007365 3.5e-134 481.9 292 78.4
Os08g0299000 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D007365 3.5e-134 481.9 291 76.3
Lalb_Chr23g0268401 Lupinus albus HOM05D005419 ORTHO05D007365 7.9e-134 480.7 290 77.9
Haze_21481 Corylus avellana HOM05D005419 ORTHO05D007365 1.0e-133 480.3 321 71.3
Sc09g0010330 Simmondsia chinensis HOM05D005419 ORTHO05D007365 1.8e-133 479.6 291 78.0
Lj8A726G39 Lonicera japonica HOM05D005419 ORTHO05D007365 4.3e-132 474.9 290 76.2
THA.LOC104815027 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 4.3e-132 474.9 287 77.0
MBI15_g25765_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 1.6e-131 473.0 290 75.9
Nitab4.5_0007718g0040 Nicotiana tabacum HOM05D005419 ORTHO05D007365 1.6e-131 473.0 292 77.7
unitig_32.g10881 Utricularia gibba HOM05D005419 ORTHO05D007365 2.1e-131 472.6 290 75.2
Prupe.1G484800 Prunus persica HOM05D005419 ORTHO05D007365 4.8e-131 471.5 273 81.7
SGA_v2.0_scaffold20G09092 Striga asiatica HOM05D005419 ORTHO05D007365 6.9e-130 467.6 292 76.7
Zm00001eb362830 Zea mays HOM05D005419 ORTHO05D007365 9.0e-130 467.2 289 77.2
FAN15G2739 Fragaria x ananassa HOM05D005419 ORTHO05D007365 2.0e-129 466.1 273 80.2
CANSAT54G2335 Cannabis sativa HOM05D005419 ORTHO05D007365 5.9e-129 464.5 289 74.7
HPP92_000481 Vanilla planifolia HOM05D005419 ORTHO05D007365 1.0e-128 463.8 289 74.4
Sed0006243 Sechium edule HOM05D005419 ORTHO05D007365 5.0e-128 461.5 289 74.7
CDE03G0272 Ceratophyllum demersum HOM05D005419 ORTHO05D007365 6.5e-128 461.1 294 73.8
vmacro05161 Vaccinium macrocarpon HOM05D005419 ORTHO05D007365 1.4e-127 459.9 271 79.3
Lsat_1_v5_gn_5_157921 Lactuca sativa HOM05D005419 ORTHO05D007365 1.6e-126 456.4 290 75.9
ClCG08G013470 Citrullus lanatus HOM05D005419 ORTHO05D007365 2.1e-126 456.1 313 72.2
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 2.7e-126 455.7 270 79.6
Duzib168G1909 Durio zibethinus HOM05D005419 ORTHO05D007365 9.7e-124 447.2 292 73.6
Rhsim12G0212900 Rhododendron simsii HOM05D005419 ORTHO05D007365 1.6e-123 446.4 292 73.6
COL.COLO4_18897 Corchorus olitorius HOM05D005419 ORTHO05D007365 2.8e-123 445.7 251 81.3
ATR0767G069 Amborella trichopoda HOM05D005419 ORTHO05D007365 6.3e-123 444.5 271 76.4
Dinv18189 Davidia involucrata HOM05D005419 ORTHO05D007365 8.8e-117 424.1 292 70.9
Hund04483 Selenicereus undatus HOM05D005419 ORTHO05D007365 1.3e-115 420.2 310 66.1
Mapoly0065s0048 Marchantia polymorpha HOM05D005419 ORTHO05D007365 8.2e-115 417.5 283 66.8
MBI15_g36826_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 1.1e-114 417.2 271 73.8
Pp3c14_17280 Physcomitrium patens HOM05D005419 ORTHO05D007365 1.1e-114 417.2 288 66.0
SMO358G0334 Selaginella moellendorffii HOM05D005419 ORTHO05D007365 5.5e-111 404.8 286 65.4
Pp3c2_14390 Physcomitrium patens HOM05D005419 ORTHO05D007365 7.9e-110 401.0 273 67.8
SEGI_34683 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 1.3e-107 393.7 273 65.9
CBR_g59364 Chara braunii HOM05D005419 ORTHO05D007365 1.6e-105 386.7 281 63.7
SEGI_02513 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 5.3e-98 361.7 223 76.2
Rhsim07G0160700 Rhododendron simsii HOM05D005419 ORTHO05D007365 1.9e-87 326.6 306 55.9
Cre02.g096200 Chlamydomonas reinhardtii HOM05D005419 ORTHO05D007365 8.8e-85 317.8 285 51.2
Oeu012280.1 Olea europaea HOM05D005419 ORTHO05D007365 7.0e-82 308.1 190 76.8
PRCOL_00000176 Prasinoderma coloniale HOM05D005419 ORTHO05D007365 1.0e-80 304.3 294 52.0
THA.LOC104815144 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 2.9e-80 302.8 194 74.7
CAN.G75.9 Capsicum annuum HOM05D005419 ORTHO05D007365 2.5e-79 299.7 183 78.1
MCO07G667 Micromonas commoda HOM05D005419 ORTHO05D007365 5.7e-76 288.5 290 51.0
Sabra06G0201900 Salix brachista HOM05D005419 ORTHO05D007365 1.7e-75 287.0 173 80.3
AagrBONN_evm.TU.Sc2ySwM_368.1912 Anthoceros agrestis HOM05D005419 ORTHO05D007365 3.0e-72 276.2 188 67.0
Haze_26290 Corylus avellana HOM05D005419 ORTHO05D007365 1.5e-68 263.8 293 44.7
Cfa026845 Carpinus fangiana HOM05D005419 ORTHO05D007365 2.3e-56 223.4 312 43.3
Lalb_Chr11g0063641 Lupinus albus HOM05D005419 ORTHO05D007365 2.3e-53 213.4 164 62.8
FAN09G2129 Fragaria x ananassa HOM05D005419 ORTHO05D019206 4.9e-51 205.7 224 50.0
FAN28G2535 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.7e-49 199.9 221 49.8
Oeu012278.1 Olea europaea HOM05D005419 ORTHO05D007365 3.2e-42 176.4 114 71.1
FAN01G2683 Fragaria x ananassa HOM05D005419 ORTHO05D019206 9.3e-42 174.9 101 81.2
FAN02G2313 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.1e-41 173.7 102 79.4
FAN21G3387 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.3e-38 164.5 97 79.4
Os05g0310750 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D019206 3.4e-28 129.8 76 80.3
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.4e-21 107.8 164 38.4
FAN16G2296 Fragaria x ananassa HOM05D005419 ORTHO05D019206 9.0e-21 105.1 97 58.8
MBI12_g19406_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D242193 2.9e-11 73.6 51 66.7
Prupe.1G567700 Prunus persica HOM05D005419 ORTHO05D019206 1.5e-07 61.2 40 77.5


User provided reference genes

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