Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G24395 Arabidopsis thaliana HOM05D007770 ORTHO05D009827 2.2e-75 285.4 133 100.0
AL4G14830 Arabidopsis lyrata HOM05D007770 ORTHO05D009827 1.9e-63 245.7 133 86.5
Carub.0004s0375 Capsella rubella HOM05D007770 ORTHO05D009827 1.3e-59 233.0 135 84.4
Thhalv10000372m.g Eutrema salsugineum HOM05D007770 ORTHO05D009827 1.9e-58 229.2 133 82.7
Aa31sc132G30 Aethionema arabicum HOM05D007770 ORTHO05D009827 7.4e-55 217.2 138 74.6
Sp4g03420 Schrenkiella parvula HOM05D007770 ORTHO05D009827 2.8e-54 215.3 135 74.1
CARHR117660 Cardamine hirsuta HOM05D007770 ORTHO05D009827 4.5e-52 208.0 135 75.6
A04p18710 Brassica napus HOM05D007770 ORTHO05D009827 3.3e-47 191.8 135 70.4
BcaC02g08464 Brassica carinata HOM05D007770 ORTHO05D009827 6.3e-46 187.6 135 69.6
BraA04t17481Z Brassica rapa HOM05D007770 ORTHO05D009827 1.2e-44 183.3 135 68.1
BolC4t26952H Brassica oleracea HOM05D007770 ORTHO05D009827 4.5e-44 181.4 137 67.2
C04p54000 Brassica napus HOM05D007770 ORTHO05D009827 2.5e-42 175.6 137 65.7
FvH4_2g36440 Fragaria vesca HOM05D007770 ORTHO05D009827 5.0e-35 151.4 133 55.6
FAN27G1234 Fragaria x ananassa HOM05D007770 ORTHO05D009827 8.5e-35 150.6 133 57.9
MD08G1124100 Malus domestica HOM05D007770 ORTHO05D009827 1.9e-34 149.4 132 56.8
Duzib150G1352 Durio zibethinus HOM05D007770 ORTHO05D009827 5.5e-34 147.9 132 56.1
QL12p025908 Quercus lobata HOM05D007770 ORTHO05D009827 2.1e-33 146.0 128 56.2
Atru.chr7.2683 Acer truncatum HOM05D007770 ORTHO05D009827 1.4e-32 143.3 130 56.2
CiPaw.08G021600 Carya illinoinensis HOM05D007770 ORTHO05D009827 1.4e-32 143.3 103 63.1
TAR625G0611 Trochodendron aralioides HOM05D007770 ORTHO05D009827 1.4e-32 143.3 115 57.4
Dinv13246 Davidia involucrata HOM05D007770 ORTHO05D009827 5.2e-32 141.4 124 54.8
Manes.16G137500 Manihot esculenta HOM05D007770 ORTHO05D009827 1.2e-31 140.2 129 51.2
Nn8g41062 Nelumbo nucifera HOM05D007770 ORTHO05D009827 1.5e-31 139.8 111 58.6
Ciclev10010266m.g Citrus clementina HOM05D007770 ORTHO05D009827 3.4e-31 138.7 112 57.1
CANSAT56G0680 Cannabis sativa HOM05D007770 ORTHO05D009827 1.3e-30 136.7 69 81.2
MSTRG.13938 Avicennia marina HOM05D007770 ORTHO05D009827 1.7e-30 136.3 115 54.8
Lsat_1_v5_gn_3_26540 Lactuca sativa HOM05D007770 ORTHO05D009827 2.8e-30 135.6 93 63.4
PSO063G4434 Papaver somniferum HOM05D007770 ORTHO05D009827 2.8e-30 135.6 107 57.0
Eucgr.C04242 Eucalyptus grandis HOM05D007770 ORTHO05D009827 6.3e-30 134.4 114 56.1
Aqoxy7G02675 Aquilegia oxysepala HOM05D007770 ORTHO05D009827 1.1e-29 133.7 118 55.1
Phvul.009G103700 Phaseolus vulgaris HOM05D007770 ORTHO05D009827 1.8e-29 132.9 88 64.8
Lj1g0002810 Lotus japonicus HOM05D007770 ORTHO05D009827 5.3e-29 131.3 121 52.9
VMungo1309G0540 Vigna mungo HOM05D007770 ORTHO05D009827 5.3e-29 131.3 125 52.0
Thecc.09G003100 Theobroma cacao HOM05D007770 ORTHO05D009827 1.2e-28 130.2 137 49.6
ECA246G2424 Erigeron canadensis HOM05D007770 ORTHO05D009827 1.6e-28 129.8 102 58.8
CSS0009557 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D009827 2.0e-28 129.4 69 72.5
Cc08_g05750 Coffea canephora HOM05D007770 ORTHO05D009827 2.0e-28 129.4 112 52.7
FAN20G1378 Fragaria x ananassa HOM05D007770 ORTHO05D009827 2.7e-28 129.0 133 53.4
Migut.E01418 Erythranthe guttata HOM05D007770 ORTHO05D009827 1.0e-27 127.1 93 57.0
Prupe.1G455800 Prunus persica HOM05D007770 ORTHO05D009827 2.2e-27 125.9 133 49.6
GSVIVG01035563001 Vitis vinifera HOM05D007770 ORTHO05D009827 2.2e-27 125.9 107 57.0
Psat5g024680 Pisum sativum HOM05D007770 ORTHO05D009827 3.8e-27 125.2 111 54.1
Glyma.04G077900 Glycine max HOM05D007770 ORTHO05D009827 1.5e-26 123.2 81 69.1
Gorai.010G124500 Gossypium raimondii HOM05D007770 ORTHO05D009827 1.5e-26 123.2 115 53.0
TPR.G12312 Trifolium pratense HOM05D007770 ORTHO05D009827 2.5e-26 122.5 61 78.7
Gohir.D06G109700 Gossypium hirsutum HOM05D007770 ORTHO05D009827 4.2e-26 121.7 127 50.4
Medtr3g109170 Medicago truncatula HOM05D007770 ORTHO05D009827 4.2e-26 121.7 62 77.4
TWI34G0832 Tripterygium wilfordii HOM05D007770 ORTHO05D009827 7.2e-26 120.9 95 57.9
CSS0027547 Camellia sinensis var. sinensis HOM05D007770 ORTHO05D009827 1.6e-25 119.8 69 69.6
Nitab4.5_0001942g0170 Nicotiana tabacum HOM05D007770 ORTHO05D009827 5.2e-24 114.8 99 56.6
Potri.006G278250 Populus trichocarpa HOM05D007770 ORTHO05D009827 5.2e-24 114.8 125 47.2
HanXRQChr17g0539271 Helianthus annuus HOM05D007770 ORTHO05D009827 6.8e-24 114.4 88 61.4
HPP92_017098 Vanilla planifolia HOM05D007770 ORTHO05D009827 6.8e-24 114.4 68 67.6
arahy.Tifrunner.gnm1.ann1.SE3NL1 Arachis hypogaea HOM05D007770 ORTHO05D009827 1.2e-23 113.6 129 45.7
CAN.G480.16 Capsicum annuum HOM05D007770 ORTHO05D009827 1.5e-23 113.2 99 56.6
Sabra06G0215900 Salix brachista HOM05D007770 ORTHO05D009827 2.0e-23 112.8 129 45.7
PGSC0003DMG400029583 Solanum tuberosum HOM05D007770 ORTHO05D009827 2.0e-23 112.8 99 54.5
EL10Ac2g03698 Beta vulgaris HOM05D007770 ORTHO05D009827 2.6e-23 112.5 74 63.5
arahy.Tifrunner.gnm1.ann1.DWH8JW Arachis hypogaea HOM05D007770 ORTHO05D009827 4.4e-23 111.7 106 50.0
Sopen08g022850 Solanum pennellii HOM05D007770 ORTHO05D009827 7.5e-23 110.9 99 54.5
RcHm_v2.0_Chr6g0305461 Rosa chinensis HOM05D007770 ORTHO05D009827 9.8e-23 110.5 111 53.2
Solyc08g069230.3 Solanum lycopersicum HOM05D007770 ORTHO05D009827 9.8e-23 110.5 99 53.5
Pp3c27_7640 Physcomitrium patens HOM05D007770 ORTHO05D009827 2.8e-22 109.0 71 63.4
unitig_747.g21378 Utricularia gibba HOM05D007770 ORTHO05D009827 1.2e-20 103.6 102 50.0
DCAR_000666 Daucus carota HOM05D007770 ORTHO05D009827 2.7e-20 102.4 106 48.1
FAN15G1940 Fragaria x ananassa HOM05D007770 ORTHO05D009827 2.7e-20 102.4 108 49.1
CDE02G4318 Ceratophyllum demersum HOM05D007770 ORTHO05D009827 4.5e-20 101.7 86 55.8
CBR_g3948 Chara braunii HOM05D007770 ORTHO05D009827 1.0e-19 100.5 68 60.3
Mapoly0035s0047 Marchantia polymorpha HOM05D007770 ORTHO05D009827 1.7e-19 99.8 74 52.7
CDE06G0935 Ceratophyllum demersum HOM05D007770 ORTHO05D009827 3.8e-19 98.6 86 54.7
CANSAT56G1809 Cannabis sativa HOM05D007770 ORTHO05D009827 6.6e-19 97.8 102 49.0
Gohir.A06G107400 Gossypium hirsutum HOM05D007770 ORTHO05D009827 8.6e-19 97.4 98 54.1
arahy.Tifrunner.gnm1.ann1.T2QDAL Arachis hypogaea HOM05D007770 ORTHO05D009827 5.5e-18 94.7 84 53.6
Nitab4.5_0000970g0130 Nicotiana tabacum HOM05D007770 ORTHO05D009827 7.2e-18 94.4 71 60.6
SalBow8G5425 Salvia bowleyana HOM05D007770 ORTHO05D009827 9.5e-18 94.0 111 42.3
AagrBONN_evm.TU.Sc2ySwM_228.4990 Anthoceros agrestis HOM05D007770 ORTHO05D009827 8.0e-17 90.9 63 55.6
MELO3C011169.2 Cucumis melo HOM05D007770 ORTHO05D009827 8.0e-17 90.9 84 51.2
ClCG08G012500 Citrullus lanatus HOM05D007770 ORTHO05D009827 1.8e-16 89.7 82 51.2
Actinidia25745 Actinidia chinensis HOM05D007770 ORTHO05D009827 2.3e-16 89.4 52 69.2
Zm00001eb035580 Zea mays HOM05D007770 ORTHO05D009827 2.3e-16 89.4 154 36.4
CsaV3_2G031200 Cucumis sativus L. HOM05D007770 ORTHO05D009827 4.0e-16 88.6 104 47.1
Sed0000657 Sechium edule HOM05D007770 ORTHO05D009827 4.0e-16 88.6 70 58.6
MD15G1102800 Malus domestica HOM05D007770 ORTHO05D009827 5.2e-16 88.2 108 42.6
Os08g0520850 Oryza sativa ssp. japonica HOM05D007770 ORTHO05D009827 5.7e-15 84.7 41 82.9
Lalb_Chr23g0269281 Lupinus albus HOM05D007770 ORTHO05D009827 1.1e-13 80.5 113 40.7
HPP92_017108 Vanilla planifolia HOM05D007770 ORTHO05D009827 2.4e-13 79.3 49 63.3
Peaxi162Scf00213g00947 Petunia axillaris HOM05D007770 ORTHO05D009827 6.1e-09 64.7 99 39.4
MD08G1226400 Malus domestica HOM05D007770 ORTHO05D009827 1.0e-08 63.9 30 83.3
Glyma.06G079000 Glycine max HOM05D007770 ORTHO05D009827 2.3e-08 62.8 31 74.2


User provided reference genes

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