Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G24090 Arabidopsis thaliana HOM05D006256 ORTHO05D007833 8.1e-71 270.4 146 100.0
AL4G14180 Arabidopsis lyrata HOM05D006256 ORTHO05D007833 1.0e-65 253.4 146 94.5
Carub.0004s0326 Capsella rubella HOM05D006256 ORTHO05D007833 2.3e-65 252.3 146 94.5
CARHR118260 Cardamine hirsuta HOM05D006256 ORTHO05D007833 4.0e-62 241.5 146 89.7
A04p18400 Brassica napus HOM05D006256 ORTHO05D007833 9.9e-53 210.3 150 81.3
BraA04t17452Z Brassica rapa HOM05D006256 ORTHO05D007833 9.9e-53 210.3 150 81.3
Sp4g02990 Schrenkiella parvula HOM05D006256 ORTHO05D007833 1.3e-52 209.9 150 81.3
A09p56610 Brassica napus HOM05D006256 ORTHO05D007833 1.7e-52 209.5 150 82.0
BraA09t41052Z Brassica rapa HOM05D006256 ORTHO05D007833 1.7e-52 209.5 150 82.0
BolC4t26923H Brassica oleracea HOM05D006256 ORTHO05D007833 4.9e-52 208.0 150 80.7
BcaC07g40961 Brassica carinata HOM05D006256 ORTHO05D007833 8.4e-52 207.2 150 81.3
C04p53670 Brassica napus HOM05D006256 ORTHO05D007833 1.4e-51 206.5 150 80.7
C08p39560 Brassica napus HOM05D006256 ORTHO05D007833 7.1e-51 204.1 150 82.0
BolC8t51529H Brassica oleracea HOM05D006256 ORTHO05D007833 7.1e-51 204.1 150 82.0
Thhalv10000362m.g Eutrema salsugineum HOM05D006256 ORTHO05D007833 9.3e-51 203.8 152 79.6
Aa31LG7G12680 Aethionema arabicum HOM05D006256 ORTHO05D007833 1.1e-46 190.3 154 74.0
THA.LOC104803911 Tarenaya hassleriana HOM05D006256 ORTHO05D007833 4.3e-40 168.3 159 64.8
BcaC02g08498 Brassica carinata HOM05D006256 ORTHO05D007833 4.8e-39 164.9 150 68.7
Potri.018G102700 Populus trichocarpa HOM05D006256 ORTHO05D007833 5.3e-38 161.4 153 65.4
Cpa.g.sc199.16 Carica papaya HOM05D006256 ORTHO05D007833 3.4e-37 158.7 135 68.1
COL.COLO4_05401 Corchorus olitorius HOM05D006256 ORTHO05D007833 3.4e-37 158.7 150 63.3
Sabra18G0088200 Salix brachista HOM05D006256 ORTHO05D007833 5.9e-37 157.9 152 65.8
Thecc.09G154100 Theobroma cacao HOM05D006256 ORTHO05D007833 7.7e-37 157.5 150 62.7
Duzib187G1001 Durio zibethinus HOM05D006256 ORTHO05D007833 1.3e-36 156.8 150 64.0
MBI15_g35737_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 3.8e-36 155.2 151 62.9
Nn2g12458 Nelumbo nucifera HOM05D006256 ORTHO05D007833 6.5e-36 154.5 150 66.7
CiPaw.15G164300 Carya illinoinensis HOM05D006256 ORTHO05D007833 1.4e-35 153.3 109 76.1
Manes.14G113600 Manihot esculenta HOM05D006256 ORTHO05D007833 4.2e-35 151.8 153 62.7
CiPaw.16G106600 Carya illinoinensis HOM05D006256 ORTHO05D007833 9.4e-35 150.6 109 77.1
TAR626G0939 Trochodendron aralioides HOM05D006256 ORTHO05D007833 9.4e-35 150.6 147 62.6
EL10Ac8g18906 Beta vulgaris HOM05D006256 ORTHO05D007833 1.2e-34 150.2 111 77.5
Aqoxy7G03320 Aquilegia oxysepala HOM05D006256 ORTHO05D007833 2.1e-34 149.4 154 63.6
Atru.chr7.353 Acer truncatum HOM05D006256 ORTHO05D007833 6.1e-34 147.9 152 63.2
FAN17G2907 Fragaria x ananassa HOM05D006256 ORTHO05D007833 6.1e-34 147.9 109 73.4
FAN17G2911 Fragaria x ananassa HOM05D006256 ORTHO05D007833 6.1e-34 147.9 109 73.4
RcHm_v2.0_Chr4g0405501 Rosa chinensis HOM05D006256 ORTHO05D007833 6.1e-34 147.9 109 73.4
Dinv43283 Davidia involucrata HOM05D006256 ORTHO05D007833 7.9e-34 147.5 150 62.7
FAN07G0991 Fragaria x ananassa HOM05D006256 ORTHO05D007833 7.9e-34 147.5 109 73.4
Hma1.2p1_1084F.1_g255300 Hydrangea macrophylla HOM05D006256 ORTHO05D007833 7.9e-34 147.5 150 61.3
MD04G1052200 Malus domestica HOM05D006256 ORTHO05D007833 1.8e-33 146.4 110 71.8
CDE02G1547 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 2.3e-33 146.0 157 61.1
CDE05G2121 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 2.3e-33 146.0 154 61.0
Prupe.1G102100 Prunus persica HOM05D006256 ORTHO05D007833 3.0e-33 145.6 109 73.4
FAN22G0392 Fragaria x ananassa HOM05D006256 ORTHO05D007833 3.9e-33 145.2 109 72.5
PGR102G0560 Punica granatum HOM05D006256 ORTHO05D007833 6.7e-33 144.4 154 58.4
Sed0025015 Sechium edule HOM05D006256 ORTHO05D007833 6.7e-33 144.4 109 74.3
FvH4_4g09690 Fragaria vesca HOM05D006256 ORTHO05D007833 1.1e-32 143.7 105 73.3
CANSAT11G0095 Cannabis sativa HOM05D006256 ORTHO05D007833 1.9e-32 142.9 152 61.2
TAR383G0166 Trochodendron aralioides HOM05D006256 ORTHO05D007833 2.5e-32 142.5 138 63.8
TWI32G1056 Tripterygium wilfordii HOM05D006256 ORTHO05D007833 3.3e-32 142.1 153 57.5
Gohir.A08G087800 Gossypium hirsutum HOM05D006256 ORTHO05D007833 4.3e-32 141.7 112 73.2
Haze_19139 Corylus avellana HOM05D006256 ORTHO05D007833 5.7e-32 141.4 154 60.4
Gohir.D08G098900 Gossypium hirsutum HOM05D006256 ORTHO05D007833 5.7e-32 141.4 117 71.8
CsaV3_1G029200 Cucumis sativus L. HOM05D006256 ORTHO05D007833 1.3e-31 140.2 152 63.2
arahy.Tifrunner.gnm1.ann1.6DRS7R Arachis hypogaea HOM05D006256 ORTHO05D007833 1.7e-31 139.8 147 60.5
Cfa020783 Carpinus fangiana HOM05D006256 ORTHO05D007833 1.7e-31 139.8 154 60.4
ClCG06G012650 Citrullus lanatus HOM05D006256 ORTHO05D007833 1.7e-31 139.8 152 63.2
VMungo1215G1943 Vigna mungo HOM05D006256 ORTHO05D007833 1.7e-31 139.8 151 61.6
Cc06_g14490 Coffea canephora HOM05D006256 ORTHO05D007833 2.2e-31 139.4 113 69.9
Phvul.003G153700 Phaseolus vulgaris HOM05D006256 ORTHO05D007833 2.2e-31 139.4 110 72.7
arahy.Tifrunner.gnm1.ann1.RJ4A7B Arachis hypogaea HOM05D006256 ORTHO05D007833 2.8e-31 139.0 147 61.2
MELO3C010199.2 Cucumis melo HOM05D006256 ORTHO05D007833 2.8e-31 139.0 152 63.2
Ciclev10009792m.g Citrus clementina HOM05D006256 ORTHO05D007833 3.7e-31 138.7 150 58.0
Gorai.004G106500 Gossypium raimondii HOM05D006256 ORTHO05D007833 3.7e-31 138.7 117 70.9
CSS0035436 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 4.8e-31 138.3 110 71.8
Lj4g0007171 Lotus japonicus HOM05D006256 ORTHO05D007833 6.3e-31 137.9 131 64.9
Glyma.02G206700 Glycine max HOM05D006256 ORTHO05D007833 1.1e-30 137.1 114 68.4
AUR62025373 Chenopodium quinoa HOM05D006256 ORTHO05D007833 1.8e-30 136.3 155 57.4
Psat7g006560 Pisum sativum HOM05D006256 ORTHO05D007833 2.4e-30 136.0 154 59.7
Eucgr.C02515 Eucalyptus grandis HOM05D006256 ORTHO05D007833 4.1e-30 135.2 148 58.8
HanXRQChr12g0357751 Helianthus annuus HOM05D006256 ORTHO05D007833 4.1e-30 135.2 108 70.4
Actinidia38660 Actinidia chinensis HOM05D006256 ORTHO05D007833 5.3e-30 134.8 151 56.3
Medtr4g130300 Medicago truncatula HOM05D006256 ORTHO05D007833 5.3e-30 134.8 149 57.7
Eucgr.L01548 Eucalyptus grandis HOM05D006256 ORTHO05D007833 9.1e-30 134.0 148 59.5
Lsat_1_v5_gn_5_88481 Lactuca sativa HOM05D006256 ORTHO05D007833 1.2e-29 133.7 108 69.4
vmacro06052 Vaccinium macrocarpon HOM05D006256 ORTHO05D007833 1.2e-29 133.7 150 57.3
HPP92_010352 Vanilla planifolia HOM05D006256 ORTHO05D007833 1.2e-29 133.7 151 57.0
Oeu010284.1 Olea europaea HOM05D006256 ORTHO05D007833 1.5e-29 133.3 152 55.3
SGA_v2.0_scaffold222G42778 Striga asiatica HOM05D006256 ORTHO05D007833 2.0e-29 132.9 151 56.3
Glyma.17G071200 Glycine max HOM05D006256 ORTHO05D007833 2.6e-29 132.5 116 67.2
MSTRG.10713 Avicennia marina HOM05D006256 ORTHO05D007833 3.4e-29 132.1 142 57.0
Hund08959 Selenicereus undatus HOM05D006256 ORTHO05D007833 4.5e-29 131.7 113 69.0
AUR62028378 Chenopodium quinoa HOM05D006256 ORTHO05D007833 7.7e-29 131.0 150 58.7
ECA234G3762 Erigeron canadensis HOM05D006256 ORTHO05D007833 7.7e-29 131.0 108 69.4
Migut.K00301 Erythranthe guttata HOM05D006256 ORTHO05D007833 1.0e-28 130.6 148 56.1
SalBow1G2070 Salvia bowleyana HOM05D006256 ORTHO05D007833 1.7e-28 129.8 123 60.2
Migut.J01392 Erythranthe guttata HOM05D006256 ORTHO05D007833 2.2e-28 129.4 109 71.6
SEGI_40166 Sequoiadendron giganteum HOM05D006256 ORTHO05D007833 2.2e-28 129.4 79 86.1
Solyc07g006000.3 Solanum lycopersicum HOM05D006256 ORTHO05D007833 3.8e-28 128.6 149 53.7
PGSC0003DMG400011211 Solanum tuberosum HOM05D006256 ORTHO05D007833 3.8e-28 128.6 149 53.7
Sopen07g002140 Solanum pennellii HOM05D006256 ORTHO05D007833 5.0e-28 128.3 149 53.7
HanXRQChr10g0307761 Helianthus annuus HOM05D006256 ORTHO05D007833 8.5e-28 127.5 108 67.6
Peaxi162Scf00563g00414 Petunia axillaris HOM05D006256 ORTHO05D007833 8.5e-28 127.5 149 52.3
Gohir.A04G058552 Gossypium hirsutum HOM05D006256 ORTHO05D007833 1.9e-27 126.3 144 58.3
Nitab4.5_0006744g0050 Nicotiana tabacum HOM05D006256 ORTHO05D007833 2.5e-27 125.9 149 52.3
Nitab4.5_0001036g0150 Nicotiana tabacum HOM05D006256 ORTHO05D007833 3.2e-27 125.6 149 52.3
PSO063G2398 Papaver somniferum HOM05D006256 ORTHO05D007833 3.2e-27 125.6 109 67.0
Zm00001eb386680 Zea mays HOM05D006256 ORTHO05D007833 3.2e-27 125.6 106 68.9
PSO170G3639 Papaver somniferum HOM05D006256 ORTHO05D007833 4.2e-27 125.2 154 53.9
CSS0023303 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 1.6e-26 123.2 78 82.1
Os06g0647100 Oryza sativa ssp. japonica HOM05D006256 ORTHO05D007833 1.6e-26 123.2 79 81.0
Lalb_Chr13g0300681 Lupinus albus HOM05D006256 ORTHO05D007833 1.0e-25 120.6 143 58.7
MBI15_g42789_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 1.0e-25 120.6 127 58.3
GSVIVG01012574001 Vitis vinifera HOM05D006256 ORTHO05D007833 1.1e-24 117.1 68 89.7
GSVIVG01012561001 Vitis vinifera HOM05D006256 ORTHO05D007833 3.3e-24 115.5 67 89.6
unitig_748.g7194 Utricularia gibba HOM05D006256 ORTHO05D007833 2.2e-23 112.8 152 51.3
Dinv42817 Davidia involucrata HOM05D006256 ORTHO05D007833 3.1e-22 109.0 131 58.0
Actinidia33300 Actinidia chinensis HOM05D006256 ORTHO05D007833 5.0e-20 101.7 144 47.9
Ah.09g228670 Amaranthus hybridus HOM05D006256 ORTHO05D007833 1.4e-19 100.1 186 41.4
Rhsim03G0259400 Rhododendron simsii HOM05D006256 ORTHO05D007833 2.7e-18 95.9 94 58.5
ATR0580G126 Amborella trichopoda HOM05D006256 ORTHO05D007833 4.7e-18 95.1 85 70.6
QL02p094215 Quercus lobata HOM05D006256 ORTHO05D007833 6.1e-18 94.7 105 59.0
CBR_g46223 Chara braunii HOM05D006256 ORTHO05D007833 8.8e-17 90.9 73 67.1
SMO164G0197 Selaginella moellendorffii HOM05D006256 ORTHO05D007833 1.5e-16 90.1 68 64.7
Mapoly0027s0042 Marchantia polymorpha HOM05D006256 ORTHO05D007833 2.0e-16 89.7 142 47.2
Pp3c22_13420 Physcomitrium patens HOM05D006256 ORTHO05D007833 1.3e-15 87.0 110 48.2
TPR.G24835 Trifolium pratense HOM05D006256 ORTHO05D007833 4.1e-14 82.0 125 48.0
CAN.G1190.22 Capsicum annuum HOM05D006256 ORTHO05D007833 1.2e-13 80.5 100 56.0
Pp3c21_8680 Physcomitrium patens HOM05D006256 ORTHO05D007833 2.5e-11 72.8 62 62.9
SGA_v2.0_scaffold12G06024 Striga asiatica HOM05D006256 ORTHO05D007833 8.8e-09 64.3 106 41.5
CSS0026373 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 5.7e-08 61.6 111 43.2
MCO09G536 Micromonas commoda HOM05D006256 ORTHO05D007833 4.8e-07 58.5 100 40.0
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 4.8e-07 58.5 48 66.7
Zm00001eb000270 Zea mays HOM05D006256 ORTHO05D007833 6.3e-07 58.2 48 72.9
PRCOL_00001020 Prasinoderma coloniale HOM05D006256 ORTHO05D007833 3.1e-06 55.8 61 47.5


User provided reference genes

Program Settings