Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G23840 Arabidopsis thaliana HOM05D006942 ORTHO05D008737 1.4e-156 556.2 285 100.0
AL1G64670 Arabidopsis lyrata HOM05D006942 ORTHO05D008737 1.0e-146 523.5 283 91.2
Carub.0002s0962 Capsella rubella HOM05D006942 ORTHO05D008737 2.0e-137 492.7 287 85.7
SpUn0001_1050 Schrenkiella parvula HOM05D006942 ORTHO05D008737 6.3e-136 487.6 288 84.7
CARHR028870 Cardamine hirsuta HOM05D006942 ORTHO05D008737 7.0e-127 457.6 287 80.8
A09p19530 Brassica napus HOM05D006942 ORTHO05D008737 4.7e-123 444.9 286 80.1
BcaC04g22009 Brassica carinata HOM05D006942 ORTHO05D008737 1.4e-122 443.4 286 79.7
C09p24900 Brassica napus HOM05D006942 ORTHO05D008737 1.4e-122 443.4 286 79.7
BolC9t55381H Brassica oleracea HOM05D006942 ORTHO05D008737 1.4e-122 443.4 286 79.7
Aa31LG2G1990 Aethionema arabicum HOM05D006942 ORTHO05D008737 1.8e-119 433.0 297 74.1
THA.LOC104823787 Tarenaya hassleriana HOM05D006942 ORTHO05D008737 5.0e-117 424.9 289 74.0
BcaB07g31088 Brassica carinata HOM05D006942 ORTHO05D008737 5.5e-116 421.4 279 78.1
Thhalv10008350m.g Eutrema salsugineum HOM05D006942 ORTHO05D008737 3.5e-110 402.1 289 75.8
Atru.chr2.1323 Acer truncatum HOM05D006942 ORTHO05D008737 4.3e-92 342.0 290 63.1
CsaV3_3G043400 Cucumis sativus L. HOM05D006942 ORTHO05D008737 5.6e-92 341.7 287 61.3
Manes.08G149200 Manihot esculenta HOM05D006942 ORTHO05D008737 5.6e-92 341.7 285 61.8
ClCG10G013230 Citrullus lanatus HOM05D006942 ORTHO05D008737 7.3e-92 341.3 288 61.5
Nn7g35832 Nelumbo nucifera HOM05D006942 ORTHO05D008737 9.5e-92 340.9 292 61.6
Sed0013150 Sechium edule HOM05D006942 ORTHO05D008737 2.1e-91 339.7 285 60.4
MELO3C026901.2 Cucumis melo HOM05D006942 ORTHO05D008737 3.6e-91 339.0 283 61.8
QL07p020181 Quercus lobata HOM05D006942 ORTHO05D008737 4.7e-91 338.6 290 61.0
TAR633G0669 Trochodendron aralioides HOM05D006942 ORTHO05D008737 4.7e-91 338.6 292 60.3
Nn2g15884 Nelumbo nucifera HOM05D002140 ORTHO05D008737 4.0e-90 335.5 297 59.3
PGR042G3330 Punica granatum HOM05D006942 ORTHO05D008737 5.2e-90 335.1 285 60.7
COL.COLO4_13617 Corchorus olitorius HOM05D006942 ORTHO05D008737 6.8e-90 334.7 284 60.6
Potri.013G059500 Populus trichocarpa HOM05D006942 ORTHO05D008737 8.9e-90 334.3 292 60.3
MSTRG.19939 Avicennia marina HOM05D006942 ORTHO05D008737 2.6e-89 332.8 289 58.5
Duzib177G1195 Durio zibethinus HOM05D006942 ORTHO05D008737 3.4e-89 332.4 289 59.2
Cpa.g.sc51.94 Carica papaya HOM05D006942 ORTHO05D008737 1.7e-88 330.1 296 61.1
Ciclev10021582m.g Citrus clementina HOM05D006942 ORTHO05D008737 1.7e-88 330.1 270 62.2
MBI11_g05460_MAGBIO Magnolia biondii HOM05D006942 ORTHO05D008737 3.7e-88 328.9 290 59.3
GSVIVG01033386001 Vitis vinifera HOM05D006942 ORTHO05D008737 4.9e-88 328.6 185 79.5
MD12G1002500 Malus domestica HOM05D006942 ORTHO05D008737 1.1e-87 327.4 183 80.9
FAN21G2944 Fragaria x ananassa HOM05D006942 ORTHO05D008737 1.4e-87 327.0 235 68.9
Thecc.05G293100 Theobroma cacao HOM05D006942 ORTHO05D008737 1.4e-87 327.0 283 60.4
FAN16G3006 Fragaria x ananassa HOM05D006942 ORTHO05D008737 3.2e-87 325.9 184 81.0
RcHm_v2.0_Chr5g0046891 Rosa chinensis HOM05D006942 ORTHO05D008737 3.2e-87 325.9 184 79.3
FvH4_3g25250 Fragaria vesca HOM05D006942 ORTHO05D008737 5.4e-87 325.1 186 80.6
Eucgr.A02087 Eucalyptus grandis HOM05D006942 ORTHO05D008737 1.2e-86 323.9 285 60.4
Rhsim04G0087000 Rhododendron simsii HOM05D006942 ORTHO05D008737 2.7e-86 322.8 191 77.0
Gorai.013G123100 Gossypium raimondii HOM05D006942 ORTHO05D008737 3.5e-86 322.4 282 58.5
vmacro09146 Vaccinium macrocarpon HOM05D006942 ORTHO05D008737 3.5e-86 322.4 191 78.0
DCAR_019882 Daucus carota HOM05D006942 ORTHO05D008737 4.6e-86 322.0 277 58.5
TWI34G0045 Tripterygium wilfordii HOM05D006942 ORTHO05D008737 1.0e-85 320.9 185 79.5
Gorai.007G287900 Gossypium raimondii HOM05D006942 ORTHO05D008737 1.3e-85 320.5 287 57.5
DCAR_009675 Daucus carota HOM05D006942 ORTHO05D008737 3.0e-85 319.3 180 80.0
CANSAT78G1082 Cannabis sativa HOM05D006942 ORTHO05D008737 3.9e-85 318.9 290 59.0
Gohir.D13G109500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 3.9e-85 318.9 282 58.2
CDE10G0368 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 6.6e-85 318.2 288 58.0
ATR0697G165 Amborella trichopoda HOM05D006942 ORTHO05D008737 8.6e-85 317.8 187 77.0
Aqoxy2G00557 Aquilegia oxysepala HOM05D006942 ORTHO05D008737 8.6e-85 317.8 284 57.7
Sed0025081 Sechium edule HOM05D006942 ORTHO05D008737 1.9e-84 316.6 183 80.3
Cc00_g08890 Coffea canephora HOM05D006942 ORTHO05D008737 2.5e-84 316.2 298 55.7
Migut.J01895 Erythranthe guttata HOM05D006942 ORTHO05D008737 5.6e-84 315.1 185 77.8
PSO339G1210 Papaver somniferum HOM05D006942 ORTHO05D008737 5.6e-84 315.1 294 56.5
Peaxi162Scf00076g01036 Petunia axillaris HOM05D006942 ORTHO05D008737 9.5e-84 314.3 303 56.1
Gohir.A13G105500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 1.6e-83 313.5 273 58.6
Sabra19G0041400 Salix brachista HOM05D006942 ORTHO05D008737 2.1e-83 313.2 292 57.5
arahy.Tifrunner.gnm1.ann1.0W916P Arachis hypogaea HOM05D006942 ORTHO05D008737 3.6e-83 312.4 185 78.9
Haze_19409 Corylus avellana HOM05D006942 ORTHO05D008737 4.7e-83 312.0 323 52.9
SGA_v2.0_scaffold50G18512 Striga asiatica HOM05D006942 ORTHO05D008737 6.2e-83 311.6 186 76.3
HanXRQChr13g0398101 Helianthus annuus HOM05D006942 ORTHO05D008737 8.1e-83 311.2 295 56.6
VMungo1383G0897 Vigna mungo HOM05D006942 ORTHO05D008737 1.4e-82 310.5 182 78.6
Lj1g0019871 Lotus japonicus HOM05D006942 ORTHO05D008737 5.2e-82 308.5 179 78.8
Lalb_Chr24g0403081 Lupinus albus HOM05D006942 ORTHO05D008737 5.2e-82 308.5 185 77.3
Medtr7g085420 Medicago truncatula HOM05D006942 ORTHO05D008737 1.5e-81 307.0 181 79.0
TPR.G5873 Trifolium pratense HOM05D006942 ORTHO05D008737 1.5e-81 307.0 187 74.3
ECA233G4155 Erigeron canadensis HOM05D006942 ORTHO05D008737 2.0e-81 306.6 228 66.7
Lsat_1_v5_gn_6_36781 Lactuca sativa HOM05D006942 ORTHO05D008737 2.6e-81 306.2 289 56.7
Phvul.001G109600 Phaseolus vulgaris HOM05D006942 ORTHO05D008737 2.6e-81 306.2 182 77.5
Glyma.19G110300 Glycine max HOM05D006942 ORTHO05D008737 5.8e-81 305.1 182 77.5
Glyma.16G042200 Glycine max HOM05D006942 ORTHO05D008737 1.3e-80 303.9 182 78.0
HPP92_018642 Vanilla planifolia HOM05D006942 ORTHO05D008737 1.4e-79 300.4 179 74.9
Eucgr.K01480 Eucalyptus grandis HOM05D006942 ORTHO05D008737 1.2e-78 297.4 182 73.6
Psat3g089160 Pisum sativum HOM05D006942 ORTHO05D008737 1.6e-78 297.0 187 73.8
TAR623G0107 Trochodendron aralioides HOM05D002140 ORTHO05D002382 1.9e-76 290.0 168 78.6
CDE06G2457 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 2.1e-75 286.6 179 72.6
Os07g0170200 Oryza sativa ssp. japonica HOM05D006942 ORTHO05D008737 5.3e-74 282.0 165 78.2
Lalb_Chr06g0173931 Lupinus albus HOM05D006942 ORTHO05D008737 1.3e-72 277.3 225 60.9
PGR142G1268 Punica granatum HOM05D006942 ORTHO05D008737 6.4e-72 275.0 185 69.7
EL10Ac3g06808 Beta vulgaris HOM05D006942 ORTHO05D008737 8.4e-72 274.6 229 59.8
Prupe.7G002400 Prunus persica HOM05D006942 ORTHO05D008737 2.7e-70 269.6 163 75.5
Sabra13G0052800 Salix brachista HOM05D006942 ORTHO05D008737 1.3e-69 267.3 159 77.4
CiPaw.09G001300 Carya illinoinensis HOM05D006942 ORTHO05D008737 8.7e-69 264.6 154 76.0
Gohir.D11G268200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 3.3e-68 262.7 287 49.8
Lj2A357G77 Lonicera japonica HOM05D006942 ORTHO05D008737 4.8e-67 258.8 154 77.3
AUR62032674 Chenopodium quinoa HOM05D006942 ORTHO05D008737 1.2e-65 254.2 172 66.9
Actinidia38618 Actinidia chinensis HOM05D006942 ORTHO05D008737 2.0e-65 253.4 177 68.4
CSS0046453 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 4.5e-65 252.3 294 48.6
Sc13g0007650 Simmondsia chinensis HOM05D006942 ORTHO05D008737 9.3e-63 244.6 148 74.3
Ca_08258_v3 Cicer arietinum L. HOM05D006942 ORTHO05D008737 3.9e-61 239.2 148 75.7
AagrBONN_evm.TU.Sc2ySwM_344.2088 Anthoceros agrestis HOM05D006942 ORTHO05D008737 4.8e-59 232.3 187 56.7
Manes.09G142700 Manihot esculenta HOM05D006942 ORTHO05D008737 6.9e-58 228.4 222 57.2
AUR62032073 Chenopodium quinoa HOM05D006942 ORTHO05D008737 1.5e-57 227.3 166 64.5
Pp3c12_13900 Physcomitrium patens HOM05D006942 ORTHO05D008737 3.4e-57 226.1 192 55.2
Mapoly0043s0076 Marchantia polymorpha HOM05D006942 ORTHO05D008737 7.6e-57 224.9 184 54.9
Pp3c4_7620 Physcomitrium patens HOM05D006942 ORTHO05D008737 1.7e-56 223.8 190 54.2
Duzib128G0620 Durio zibethinus HOM05D006942 ORTHO05D008737 1.9e-52 210.3 248 49.2
arahy.Tifrunner.gnm1.ann1.T4HPZA Arachis hypogaea HOM05D006942 ORTHO05D008737 2.8e-51 206.5 185 58.4
Nitab4.5_0000911g0030 Nicotiana tabacum HOM05D006942 ORTHO05D008737 4.5e-49 199.1 117 78.6
SMO364G0530 Selaginella moellendorffii HOM05D006942 ORTHO05D008737 1.1e-47 194.5 185 48.1
Ah.04g153240 Amaranthus hybridus HOM05D000653 ORTHO05D003117 4.2e-47 192.6 176 56.8
unitig_85.g27430 Utricularia gibba HOM05D006942 ORTHO05D008737 2.3e-45 186.8 131 68.7
Oeu048436.1 Olea europaea HOM05D006942 ORTHO05D008737 1.3e-43 181.0 167 55.1
CBR_g603 Chara braunii HOM05D006942 ORTHO05D008737 2.4e-42 176.8 203 48.3
Potri.019G033200 Populus trichocarpa HOM05D006942 ORTHO05D008737 3.2e-39 166.4 100 73.0
Hund24842 Selenicereus undatus HOM05D006942 ORTHO05D008737 9.4e-39 164.9 240 38.8
Actinidia17307 Actinidia chinensis HOM05D006942 ORTHO05D008737 1.4e-37 161.0 110 68.2
PRCOL_00006758 Prasinoderma coloniale HOM05D006942 ORTHO05D008737 4.3e-36 156.0 180 47.2
SalBow2G1960 Salvia bowleyana HOM05D006942 ORTHO05D008737 9.7e-36 154.8 93 72.0
Gohir.A11G258200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 6.3e-35 152.1 98 67.3
Cre04.g217903 Chlamydomonas reinhardtii HOM05D006942 ORTHO05D008737 6.9e-34 148.7 176 44.3
SEGI_36650 Sequoiadendron giganteum HOM05D006942 ORTHO05D008737 2.7e-22 110.2 72 72.2
Zm00001eb300960 Zea mays HOM05D006942 ORTHO05D008737 1.3e-08 64.7 34 82.4
Pp3s30_1160 Physcomitrium patens HOM05D006942 ORTHO05D317230 6.1e-06 55.8 59 40.7


User provided reference genes

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