Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G23755 Arabidopsis thaliana HOM05D007898 ORTHO05D010010 1.0e-76 290.0 151 100.0
AL4G13750 Arabidopsis lyrata HOM05D007898 ORTHO05D010010 5.3e-65 251.1 156 85.9
Carub.0004s0293 Capsella rubella HOM05D007898 ORTHO05D010010 9.0e-65 250.4 149 87.2
CARHR114600 Cardamine hirsuta HOM05D007898 ORTHO05D010010 2.2e-63 245.7 156 85.3
Thhalv10000478m.g Eutrema salsugineum HOM05D007898 ORTHO05D010010 2.4e-54 215.7 193 66.3
THA.LOC104819816 Tarenaya hassleriana HOM05D007898 ORTHO05D010010 6.5e-47 191.0 165 61.8
A09p56800 Brassica napus HOM05D007898 ORTHO05D010010 4.3e-43 178.3 129 76.7
C08p39760 Brassica napus HOM05D007898 ORTHO05D010010 2.8e-42 175.6 129 76.0
BolC8t51548H Brassica oleracea HOM05D007898 ORTHO05D010010 2.8e-42 175.6 129 76.0
Cfa004248 Carpinus fangiana HOM05D007898 ORTHO05D010010 6.5e-39 164.5 166 54.2
Thecc.01G044100 Theobroma cacao HOM05D007898 ORTHO05D010010 3.2e-38 162.2 166 53.0
FAN28G1054 Fragaria x ananassa HOM05D007898 ORTHO05D010010 4.2e-38 161.8 162 59.9
RcHm_v2.0_Chr2g0103011 Rosa chinensis HOM05D007898 ORTHO05D010010 4.2e-38 161.8 161 57.1
CiPaw.02G014000 Carya illinoinensis HOM05D007898 ORTHO05D010010 1.2e-37 160.2 165 52.7
FAN23G0801 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.6e-37 159.8 162 59.3
QL06p044475 Quercus lobata HOM05D007898 ORTHO05D010010 7.9e-37 157.5 163 52.1
FvH4_1g14340 Fragaria vesca HOM05D007898 ORTHO05D010010 1.8e-36 156.4 162 58.6
Gohir.D04G029100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 3.9e-36 155.2 167 52.1
Sed0027812 Sechium edule HOM05D007898 ORTHO05D010010 6.7e-36 154.5 166 50.6
TWI73G0930 Tripterygium wilfordii HOM05D007898 ORTHO05D010010 8.7e-36 154.1 157 55.4
Gohir.A02G162400 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.5e-35 153.3 167 51.5
Gohir.D03G018100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.9e-35 152.9 167 50.9
Gorai.012G033200 Gossypium raimondii HOM05D007898 ORTHO05D010010 1.3e-34 150.2 175 50.3
MD15G1271500 Malus domestica HOM05D007898 ORTHO05D010010 2.8e-34 149.1 165 53.3
TPR.G31555 Trifolium pratense HOM05D007898 ORTHO05D010010 2.8e-34 149.1 153 55.6
Gohir.D04G023600 Gossypium hirsutum HOM05D007898 ORTHO05D010010 4.8e-34 148.3 172 50.6
MELO3C007502.2 Cucumis melo HOM05D007898 ORTHO05D010010 1.1e-33 147.1 167 47.9
CsaV3_6G042630 Cucumis sativus L. HOM05D007898 ORTHO05D010010 1.1e-33 147.1 169 47.3
Gohir.D04G023900 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.8e-33 146.4 175 49.7
PSO170G4740 Papaver somniferum HOM05D007898 ORTHO05D010010 1.8e-33 146.4 165 50.9
CANSAT01G0863 Cannabis sativa HOM05D007898 ORTHO05D010010 6.9e-33 144.4 168 49.4
Prupe.7G146700 Prunus persica HOM05D007898 ORTHO05D010010 1.5e-32 143.3 171 51.5
ClCG01G016310 Citrullus lanatus HOM05D007898 ORTHO05D010010 2.6e-32 142.5 168 46.4
Sabra07G0028800 Salix brachista HOM05D007898 ORTHO05D010010 2.6e-32 142.5 156 48.7
GSVIVG01019045001 Vitis vinifera HOM05D007898 ORTHO05D010010 3.4e-32 142.1 164 50.0
arahy.Tifrunner.gnm1.ann1.P18VIJ Arachis hypogaea HOM05D007898 ORTHO05D010010 5.9e-32 141.4 155 52.9
Manes.12G096600 Manihot esculenta HOM05D007898 ORTHO05D010010 7.7e-32 141.0 165 48.5
Potri.007G032900 Populus trichocarpa HOM05D007898 ORTHO05D010010 1.0e-31 140.6 156 49.4
Gohir.A05G386500 Gossypium hirsutum HOM05D007898 ORTHO05D010010 2.2e-31 139.4 167 50.9
PGR142G0285 Punica granatum HOM05D007898 ORTHO05D010010 2.9e-31 139.0 160 50.6
BraA09t41069Z Brassica rapa HOM05D007898 ORTHO05D010010 3.8e-31 138.7 120 68.3
Eucgr.K01101 Eucalyptus grandis HOM05D007898 ORTHO05D010010 6.5e-31 137.9 165 48.5
TAR381G0528 Trochodendron aralioides HOM05D007898 ORTHO05D010010 1.4e-30 136.7 165 49.1
CSS0004703 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 1.6e-29 133.3 172 48.8
CSS0023760 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 1.6e-29 133.3 171 49.1
Oeu043831.1 Olea europaea HOM05D007898 ORTHO05D010010 3.6e-29 132.1 159 48.4
Sopen02g034650 Solanum pennellii HOM05D007898 ORTHO05D010010 6.1e-29 131.3 146 51.4
PGSC0003DMG400010085 Solanum tuberosum HOM05D007898 ORTHO05D010010 3.0e-28 129.0 149 51.0
ATR0053G039 Amborella trichopoda HOM05D007898 ORTHO05D010010 8.8e-28 127.5 154 49.4
CAN.G836.11 Capsicum annuum HOM05D007898 ORTHO05D010010 7.4e-27 124.4 146 49.3
Dinv26786 Davidia involucrata HOM05D007898 ORTHO05D010010 1.7e-26 123.2 120 58.3
Nitab4.5_0004932g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 2.2e-26 122.9 146 50.0
Peaxi162Scf00535g00419 Petunia axillaris HOM05D007898 ORTHO05D010010 2.2e-26 122.9 175 44.6
Hma1.2p1_0261F.1_g104820 Hydrangea macrophylla HOM05D007898 ORTHO05D010010 2.8e-26 122.5 148 50.7
arahy.Tifrunner.gnm1.ann1.376QVY Arachis hypogaea HOM05D007898 ORTHO05D010010 4.8e-26 121.7 115 59.1
Solyc02g089960.3 Solanum lycopersicum HOM05D007898 ORTHO05D010010 8.2e-26 120.9 144 49.3
Nn1g05126 Nelumbo nucifera HOM05D007898 ORTHO05D010010 1.1e-25 120.6 166 46.4
Gorai.003G018300 Gossypium raimondii HOM05D007898 ORTHO05D010010 1.4e-25 120.2 171 45.6
FAN26G2880 Fragaria x ananassa HOM05D007898 ORTHO05D010010 4.1e-25 118.6 131 56.5
Nitab4.5_0000483g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 4.1e-25 118.6 146 47.3
AUR62008035 Chenopodium quinoa HOM05D007898 ORTHO05D010010 9.1e-25 117.5 123 49.6
Ah.03g142230 Amaranthus hybridus HOM05D007898 ORTHO05D010010 2.6e-24 115.9 147 44.9
Cc07_g05300 Coffea canephora HOM05D007898 ORTHO05D010010 5.9e-24 114.8 145 50.3
Migut.K00847 Erythranthe guttata HOM05D007898 ORTHO05D010010 1.9e-22 109.8 152 44.7
Ciclev10027359m.g Citrus clementina HOM05D007898 ORTHO05D010010 3.2e-22 109.0 123 49.6
Lj7P13T39 Lonicera japonica HOM05D007898 ORTHO05D010010 3.2e-22 109.0 121 49.6
AUR62003213 Chenopodium quinoa HOM05D007898 ORTHO05D010010 2.7e-21 105.9 115 48.7
SalBow1G4022 Salvia bowleyana HOM05D007898 ORTHO05D010010 1.0e-20 104.0 143 44.8
CDE02G3439 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 8.8e-20 100.9 142 45.1
EL10Ac6g14865 Beta vulgaris HOM05D007898 ORTHO05D010010 2.2e-18 96.3 138 44.9
SHI08702 Sapria himalayana HOM05D007898 ORTHO05D010010 2.2e-18 96.3 112 53.6
SEGI_13764 Sequoiadendron giganteum HOM05D007898 ORTHO05D010010 2.2e-18 96.3 129 48.1
Haze_15152 Corylus avellana HOM05D007898 ORTHO05D010010 1.7e-15 86.7 158 39.2
SGA_v2.0_scaffold62G21534 Striga asiatica HOM05D007898 ORTHO05D010010 1.1e-14 84.0 125 43.2
Actinidia30992 Actinidia chinensis HOM05D007898 ORTHO05D010010 3.2e-14 82.4 166 39.2
FAN19G2518 Fragaria x ananassa HOM05D007898 ORTHO05D010010 5.5e-14 81.6 93 54.8
Hund14127 Selenicereus undatus HOM05D007898 ORTHO05D010010 1.6e-13 80.1 161 37.9
Lj4g0012479 Lotus japonicus HOM05D007898 ORTHO05D010010 4.4e-11 72.0 110 40.0
TAR374G1689 Trochodendron aralioides HOM05D007898 ORTHO05D010010 1.4e-09 67.0 80 47.5
CDE02G3192 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 2.5e-06 56.2 119 37.0


User provided reference genes

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