Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G22650 Arabidopsis thaliana HOM05D007151 ORTHO05D009056 5.6e-250 867.1 421 100.0
AL3G44210 Arabidopsis lyrata HOM05D007151 ORTHO05D009056 1.5e-226 789.3 411 93.4
Thhalv10025257m.g Eutrema salsugineum HOM05D007151 ORTHO05D009056 7.2e-213 743.8 414 87.7
Sp7g16040 Schrenkiella parvula HOM05D007151 ORTHO05D009056 9.4e-205 716.8 426 83.1
BraA03t14189Z Brassica rapa HOM05D007151 ORTHO05D009056 3.6e-204 714.9 413 84.5
CARHR104080 Cardamine hirsuta HOM05D007151 ORTHO05D009056 1.8e-203 712.6 407 84.8
BolC7t45451H Brassica oleracea HOM05D007151 ORTHO05D009056 1.5e-202 709.5 422 83.2
C07p49460 Brassica napus HOM05D007151 ORTHO05D009056 4.4e-202 708.0 424 82.1
A03p51030 Brassica napus HOM05D007151 ORTHO05D009056 1.4e-200 703.0 401 84.8
Aa31sc130G90 Aethionema arabicum HOM05D007151 ORTHO05D009056 1.8e-195 686.0 420 80.0
THA.LOC104826576 Tarenaya hassleriana HOM05D007151 ORTHO05D009056 8.3e-185 650.6 414 74.2
Cpa.g.sc46.106 Carica papaya HOM05D007151 ORTHO05D009056 2.4e-163 579.3 396 69.2
COL.COLO4_18747 Corchorus olitorius HOM05D007151 ORTHO05D009056 1.7e-161 573.2 432 63.4
Duzib168G1221 Durio zibethinus HOM05D007151 ORTHO05D009056 4.9e-161 571.6 414 65.0
Thecc.09G036700 Theobroma cacao HOM05D007151 ORTHO05D009056 8.4e-161 570.9 414 64.7
CANSAT11G1483 Cannabis sativa HOM05D007151 ORTHO05D009056 7.1e-160 567.8 432 60.6
Atru.chr7.189 Acer truncatum HOM05D007151 ORTHO05D009056 9.2e-160 567.4 410 64.1
Gohir.A13G185600 Gossypium hirsutum HOM05D007151 ORTHO05D009056 9.2e-160 567.4 417 64.3
Gohir.D13G192100 Gossypium hirsutum HOM05D007151 ORTHO05D009056 2.7e-159 565.8 417 64.0
Gorai.013G218000 Gossypium raimondii HOM05D007151 ORTHO05D009056 7.8e-159 564.3 417 64.0
CSS0031191 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 3.9e-158 562.0 401 65.8
Actinidia04269 Actinidia chinensis HOM05D007151 ORTHO05D009056 3.3e-157 558.9 404 64.4
Manes.06G039800 Manihot esculenta HOM05D007151 ORTHO05D009056 5.6e-157 558.1 411 65.0
Actinidia04263 Actinidia chinensis HOM05D007151 ORTHO05D009056 7.3e-157 557.8 424 61.8
QL02p091761 Quercus lobata HOM05D007151 ORTHO05D009056 2.8e-156 555.8 412 64.1
GSVIVG01001047001 Vitis vinifera HOM05D007151 ORTHO05D009056 6.2e-156 554.7 412 63.1
Ciclev10008285m.g Citrus clementina HOM05D007151 ORTHO05D009056 8.1e-156 554.3 413 64.6
Sabra18G0095800 Salix brachista HOM05D007151 ORTHO05D009056 9.0e-155 550.8 410 65.1
vmacro21874 Vaccinium macrocarpon HOM05D007151 ORTHO05D009056 2.0e-154 549.7 427 61.1
Prupe.7G252600 Prunus persica HOM05D007151 ORTHO05D009056 4.4e-154 548.5 422 62.6
CiPaw.15G171100 Carya illinoinensis HOM05D007151 ORTHO05D009056 2.9e-153 545.8 415 63.4
Cfa020867 Carpinus fangiana HOM05D007151 ORTHO05D009056 1.9e-152 543.1 412 64.3
MD02G1011800 Malus domestica HOM05D007151 ORTHO05D009056 2.4e-152 542.7 423 62.2
Aqoxy7G03505 Aquilegia oxysepala HOM05D007151 ORTHO05D009056 2.7e-151 539.3 416 61.3
ClCG06G012110 Citrullus lanatus HOM05D007151 ORTHO05D009056 3.5e-151 538.9 411 62.5
TWI34G1895 Tripterygium wilfordii HOM05D007151 ORTHO05D009056 7.8e-151 537.7 413 62.2
RcHm_v2.0_Chr2g0086401 Rosa chinensis HOM05D007151 ORTHO05D009056 1.3e-150 537.0 415 63.4
Potri.018G112600 Populus trichocarpa HOM05D007151 ORTHO05D009056 1.7e-150 536.6 412 63.8
FvH4_1g01491 Fragaria vesca HOM05D007151 ORTHO05D009056 8.7e-150 534.3 412 62.9
Peaxi162Scf00347g00330 Petunia axillaris HOM05D007151 ORTHO05D009056 1.1e-149 533.9 400 62.8
Sed0008117 Sechium edule HOM05D007151 ORTHO05D009056 5.6e-149 531.6 415 61.0
Nitab4.5_0010178g0030 Nicotiana tabacum HOM05D007151 ORTHO05D009056 1.3e-148 530.4 406 61.6
FAN26G2518 Fragaria x ananassa HOM05D007151 ORTHO05D009056 1.6e-148 530.0 412 62.6
CsaV3_1G028600 Cucumis sativus L. HOM05D007151 ORTHO05D009056 2.8e-148 529.3 409 60.6
Nitab4.5_0000416g0100 Nicotiana tabacum HOM05D007151 ORTHO05D009056 2.8e-148 529.3 422 59.7
TAR626G0740 Trochodendron aralioides HOM05D007151 ORTHO05D009056 4.8e-148 528.5 399 61.4
Carub.0013s0015 Capsella rubella HOM05D007151 ORTHO05D009056 1.1e-147 527.3 298 87.6
CAN.G520.35 Capsicum annuum HOM05D007151 ORTHO05D009056 3.1e-147 525.8 400 62.2
PGSC0003DMG400011834 Solanum tuberosum HOM05D007151 ORTHO05D009056 3.1e-147 525.8 406 61.8
Nn8g39757 Nelumbo nucifera HOM05D007151 ORTHO05D009056 4.0e-147 525.4 412 61.2
Solyc07g005240.4 Solanum lycopersicum HOM05D007151 ORTHO05D009056 9.9e-146 520.8 406 60.3
Hund21618 Selenicereus undatus HOM05D007151 ORTHO05D009056 1.3e-145 520.4 416 57.9
Haze_19293 Corylus avellana HOM05D007151 ORTHO05D009056 2.2e-145 519.6 405 63.5
Lj6g0019652 Lotus japonicus HOM05D007151 ORTHO05D009056 3.8e-145 518.8 409 60.4
Eucgr.C00404 Eucalyptus grandis HOM05D007151 ORTHO05D009056 4.2e-144 515.4 414 58.7
Glyma.15G208200 Glycine max HOM05D007151 ORTHO05D009056 1.6e-143 513.5 413 58.8
Oeu052172.1 Olea europaea HOM05D007151 ORTHO05D009056 2.7e-143 512.7 426 58.7
Lj9A711T48 Lonicera japonica HOM05D007151 ORTHO05D009056 1.3e-142 510.4 426 57.3
VMungo1309G1509 Vigna mungo HOM05D007151 ORTHO05D009056 3.9e-142 508.8 399 60.2
PGR142G3459 Punica granatum HOM05D007151 ORTHO05D009056 5.1e-142 508.4 413 59.1
Lsat_1_v5_gn_0_44621 Lactuca sativa HOM05D007151 ORTHO05D009056 8.7e-142 507.7 409 58.9
Lsat_1_v5_gn_5_90740 Lactuca sativa HOM05D007151 ORTHO05D009056 8.7e-142 507.7 409 58.9
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 4.3e-141 505.4 411 58.6
FAN23G0937 Fragaria x ananassa HOM05D007151 ORTHO05D009056 7.4e-141 504.6 436 58.5
DCAR_019364 Daucus carota HOM05D007151 ORTHO05D009056 2.8e-140 502.7 415 56.1
HanXRQChr10g0314511 Helianthus annuus HOM05D007151 ORTHO05D009056 3.7e-140 502.3 399 59.4
TPR.G31930 Trifolium pratense HOM05D007151 ORTHO05D009056 8.1e-140 501.1 420 57.4
Cc06_g23440 Coffea canephora HOM05D007151 ORTHO05D009056 3.4e-138 495.7 409 58.2
Dinv41414 Davidia involucrata HOM05D007151 ORTHO05D009056 9.9e-138 494.2 366 62.0
Medtr2g449830 Medicago truncatula HOM05D007151 ORTHO05D009056 1.3e-137 493.8 406 56.9
PSO063G2965 Papaver somniferum HOM05D007151 ORTHO05D009056 1.3e-137 493.8 436 56.0
Migut.K00359 Erythranthe guttata HOM05D007151 ORTHO05D009056 1.4e-136 490.3 402 55.7
Phvul.009G208100 Phaseolus vulgaris HOM05D007151 ORTHO05D009056 3.2e-136 489.2 409 57.7
MELO3C010253.2 Cucumis melo HOM05D007151 ORTHO05D009056 9.3e-136 487.6 409 58.2
EL10Ac8g18840 Beta vulgaris HOM05D007151 ORTHO05D009056 1.2e-135 487.3 421 57.0
Psat1g022920 Pisum sativum HOM05D007151 ORTHO05D009056 1.6e-135 486.9 405 56.8
AUR62042027 Chenopodium quinoa HOM05D007151 ORTHO05D009056 3.0e-134 482.6 423 56.0
arahy.Tifrunner.gnm1.ann1.BVF972 Arachis hypogaea HOM05D007151 ORTHO05D009056 3.3e-133 479.2 439 54.0
Os06g0181400 Oryza sativa ssp. japonica HOM05D007151 ORTHO05D009056 2.1e-132 476.5 401 56.9
Sc08g0005090 Simmondsia chinensis HOM05D007151 ORTHO05D009056 1.1e-128 464.2 421 55.3
Zm00001eb268060 Zea mays HOM05D007151 ORTHO05D009056 1.8e-126 456.8 401 54.9
SGA_v2.0_scaffold336G49159 Striga asiatica HOM05D007151 ORTHO05D009056 1.9e-125 453.4 410 51.7
arahy.Tifrunner.gnm1.ann1.36BD1U Arachis hypogaea HOM05D007151 ORTHO05D009056 2.8e-124 449.5 412 53.4
CDE05G1962 Ceratophyllum demersum HOM05D007151 ORTHO05D009056 4.8e-124 448.7 412 54.1
Sopen07g001150 Solanum pennellii HOM05D007151 ORTHO05D009056 5.9e-122 441.8 354 59.3
Ah.14g078500 Amaranthus hybridus HOM05D007151 ORTHO05D009056 5.0e-121 438.7 403 54.3
SEGI_09059 Sequoiadendron giganteum HOM05D007151 ORTHO05D009056 2.1e-119 433.3 438 49.3
SGA_v2.0_scaffold206G41840 Striga asiatica HOM05D007151 ORTHO05D009056 1.4e-118 430.6 412 50.2
Ca_25731_v3 Cicer arietinum L. HOM05D007151 ORTHO05D009056 4.3e-117 425.6 364 56.0
unitig_899.g15451 Utricularia gibba HOM05D007151 ORTHO05D009056 3.1e-115 419.5 375 55.2
CSS0035136 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 1.3e-113 414.1 297 64.6
Rhsim01G0049000 Rhododendron simsii HOM05D007151 ORTHO05D008498 6.5e-113 411.8 360 56.7
FvH4_5g35120 Fragaria vesca HOM05D007151 ORTHO05D009056 2.1e-103 380.2 285 61.8
ATR0629G078 Amborella trichopoda HOM05D007151 ORTHO05D009056 5.2e-102 375.6 365 50.7
Lalb_Chr08g0233881 Lupinus albus HOM05D007151 ORTHO05D009056 1.1e-101 374.4 294 59.5
Mapoly0072s0110 Marchantia polymorpha HOM05D007151 ORTHO05D009056 4.7e-95 352.4 438 43.2
Pp3c21_4180 Physcomitrium patens HOM05D007151 ORTHO05D009056 2.3e-86 323.6 409 43.3
Cc06_g23410 Coffea canephora HOM05D007151 ORTHO05D009056 6.0e-58 229.2 277 44.4
AagrBONN_evm.TU.Sc2ySwM_117.1501 Anthoceros agrestis HOM05D007151 ORTHO05D009056 6.8e-54 215.7 304 39.8
CANSAT11G0850 Cannabis sativa HOM05D007151 ORTHO05D009056 7.1e-51 205.7 127 70.9
PRCOL_00000450 Prasinoderma coloniale HOM05D007151 ORTHO05D009056 7.8e-50 202.2 400 35.0
Cre02.g109800 Chlamydomonas reinhardtii HOM05D007151 ORTHO05D009056 6.4e-44 182.6 521 28.4
SMO364G0487 Selaginella moellendorffii HOM05D007151 ORTHO05D009056 2.4e-38 164.1 198 43.4
Lalb_Chr08g0233871 Lupinus albus HOM05D007151 ORTHO05D009056 2.3e-33 147.5 107 62.6
MCO12G285 Micromonas commoda HOM05D007151 ORTHO05D009056 8.4e-28 129.0 498 26.7
HPP92_018514 Vanilla planifolia HOM05D007151 ORTHO05D009056 6.9e-22 109.4 95 56.8
TPR.G31928 Trifolium pratense HOM05D007151 ORTHO05D009056 5.1e-17 93.2 97 49.5
CBR_g19142 Chara braunii HOM05D007151 ORTHO05D009056 6.7e-17 92.8 276 27.5
FAN11G2323 Fragaria x ananassa HOM05D007151 ORTHO05D009056 1.6e-15 88.2 57 70.2
Hma1.2p1_0182F.1_g080700 Hydrangea macrophylla HOM05D007151 ORTHO05D009056 1.0e-09 68.9 44 65.9


User provided reference genes

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