Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G21350 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 1.5e-116 422.9 223 100.0
AL4G10520 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 7.5e-84 314.3 230 80.4
CARHR112230 Cardamine hirsuta HOM05D006646 ORTHO05D008279 3.3e-71 272.3 222 73.9
Carub.0004s0039 Capsella rubella HOM05D006646 ORTHO05D008279 9.5e-71 270.8 241 67.6
Sp4g00530 Schrenkiella parvula HOM05D006646 ORTHO05D008279 5.9e-65 251.5 241 63.1
A04p16110 Brassica napus HOM05D006646 ORTHO05D008279 5.6e-63 245.0 224 65.6
BraA04t17251Z Brassica rapa HOM05D006646 ORTHO05D008279 5.6e-63 245.0 224 65.6
BcaC02g08796 Brassica carinata HOM05D006646 ORTHO05D008279 2.8e-62 242.7 224 66.1
C04p50570 Brassica napus HOM05D006646 ORTHO05D008279 2.8e-62 242.7 224 66.1
BolC4t26655H Brassica oleracea HOM05D006646 ORTHO05D008279 2.6e-60 236.1 225 64.9
Thhalv10000312m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 4.6e-57 225.3 239 61.1
A06p48720 Brassica napus HOM05D006646 ORTHO05D008279 4.1e-50 202.2 228 54.8
THA.LOC104807761 Tarenaya hassleriana HOM05D006646 ORTHO05D008279 9.2e-50 201.1 256 49.2
Sp7g36790 Schrenkiella parvula HOM05D006646 ORTHO05D008279 1.2e-49 200.7 257 52.1
Thhalv10025960m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 1.6e-49 200.3 239 54.8
BraA06t27738Z Brassica rapa HOM05D006646 ORTHO05D008279 2.7e-49 199.5 234 53.0
Carub.0007s0091 Capsella rubella HOM05D006646 ORTHO05D008279 2.7e-49 199.5 256 50.4
CARHR247710 Cardamine hirsuta HOM05D006646 ORTHO05D008279 4.6e-49 198.7 243 52.7
AT4G39040 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 1.7e-48 196.8 256 50.4
BolC7t46749H Brassica oleracea HOM05D006646 ORTHO05D008279 4.7e-46 188.7 229 53.7
AL7G10980 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 6.2e-46 188.3 247 51.8
BcaNung01943 Brassica carinata HOM05D006646 ORTHO05D008279 2.6e-44 183.0 228 52.2
C07p63380 Brassica napus HOM05D006646 ORTHO05D008279 2.6e-44 183.0 228 52.2
Aa31LG6G16210 Aethionema arabicum HOM05D006646 ORTHO05D008279 2.4e-42 176.4 264 48.1
VMungo1127G0939 Vigna mungo HOM05D006646 ORTHO05D008279 4.4e-36 155.6 226 47.8
TWI75G0841 Tripterygium wilfordii HOM05D006646 ORTHO05D008279 7.6e-36 154.8 176 52.8
CiPaw.06G130600 Carya illinoinensis HOM05D006646 ORTHO05D008279 1.3e-35 154.1 101 77.2
Cpa.g.sc150.36 Carica papaya HOM05D006646 ORTHO05D008279 6.4e-35 151.8 238 43.3
Gorai.008G031700 Gossypium raimondii HOM05D006646 ORTHO05D008279 6.4e-35 151.8 119 66.4
Phvul.011G040400 Phaseolus vulgaris HOM05D006646 ORTHO05D008279 6.4e-35 151.8 180 51.7
Potri.009G122500 Populus trichocarpa HOM05D006646 ORTHO05D008279 6.4e-35 151.8 147 56.5
Thecc.02G077600 Theobroma cacao HOM05D006646 ORTHO05D008279 8.4e-35 151.4 228 47.8
Gohir.D12G030800 Gossypium hirsutum HOM05D006646 ORTHO05D008279 1.1e-34 151.0 122 65.6
arahy.Tifrunner.gnm1.ann1.RI2JL3 Arachis hypogaea HOM05D006646 ORTHO05D008279 1.4e-34 150.6 134 60.4
Cfa005079 Carpinus fangiana HOM05D006646 ORTHO05D008279 1.4e-34 150.6 104 73.1
Gohir.A12G041400 Gossypium hirsutum HOM05D006646 ORTHO05D008279 1.4e-34 150.6 100 74.0
Manes.04G084900 Manihot esculenta HOM05D006646 ORTHO05D008279 1.4e-34 150.6 262 42.4
Duzib132G1122 Durio zibethinus HOM05D006646 ORTHO05D008279 1.9e-34 150.2 178 51.1
arahy.Tifrunner.gnm1.ann1.I36BMJ Arachis hypogaea HOM05D006646 ORTHO05D008279 4.2e-34 149.1 131 61.1
Eucgr.G01718 Eucalyptus grandis HOM05D006646 ORTHO05D008279 4.2e-34 149.1 260 41.9
Glyma.11G112300 Glycine max HOM05D006646 ORTHO05D008279 5.4e-34 148.7 170 50.0
Migut.B00188 Erythranthe guttata HOM05D006646 ORTHO05D008279 1.6e-33 147.1 236 42.8
QL11p045794 Quercus lobata HOM05D006646 ORTHO05D008279 1.6e-33 147.1 101 72.3
Ciclev10028627m.g Citrus clementina HOM05D006646 ORTHO05D008279 2.1e-33 146.7 102 71.6
Prupe.8G087400 Prunus persica HOM05D006646 ORTHO05D008279 2.1e-33 146.7 241 46.5
SalBow6G1011 Salvia bowleyana HOM05D006646 ORTHO05D008279 2.7e-33 146.4 232 43.1
COL.COLO4_26029 Corchorus olitorius HOM05D006646 ORTHO05D008279 7.8e-33 144.8 152 55.9
Lalb_Chr01g0002221 Lupinus albus HOM05D006646 ORTHO05D008279 7.8e-33 144.8 100 70.0
MD10G1065400 Malus domestica HOM05D006646 ORTHO05D008279 7.8e-33 144.8 205 49.8
Solyc01g110270.3 Solanum lycopersicum HOM05D006646 ORTHO05D008279 1.0e-32 144.4 226 46.5
Dinv23471 Davidia involucrata HOM05D006646 ORTHO05D008279 1.3e-32 144.1 215 47.0
Sopen01g052420 Solanum pennellii HOM05D006646 ORTHO05D008279 1.3e-32 144.1 224 46.9
CSS0027643 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 1.7e-32 143.7 101 71.3
Nn6g32216 Nelumbo nucifera HOM05D006646 ORTHO05D008279 1.7e-32 143.7 104 69.2
CAN.G170.87 Capsicum annuum HOM05D006646 ORTHO05D008279 2.3e-32 143.3 225 46.7
CsaV3_7G000290 Cucumis sativus L. HOM05D006646 ORTHO05D008279 2.3e-32 143.3 216 44.9
Lj3g0021213 Lotus japonicus HOM05D006646 ORTHO05D008279 3.0e-32 142.9 128 60.2
PGR042G2699 Punica granatum HOM05D006646 ORTHO05D008279 3.0e-32 142.9 136 58.1
CSS0016085 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 5.1e-32 142.1 101 70.3
MBI05_g30638_MAGBIO Magnolia biondii HOM05D006646 ORTHO05D008279 6.6e-32 141.7 102 69.6
unitig_32.g11060 Utricularia gibba HOM05D006646 ORTHO05D008279 6.6e-32 141.7 123 61.8
MELO3C013428.2 Cucumis melo HOM05D006646 ORTHO05D008279 8.7e-32 141.4 130 59.2
Hma1.2p1_0851F.1_g228260 Hydrangea macrophylla HOM05D006646 ORTHO05D008279 8.7e-32 141.4 121 60.3
vmacro02064 Vaccinium macrocarpon HOM05D006646 ORTHO05D008279 1.1e-31 141.0 97 73.2
ClCG02G004640 Citrullus lanatus HOM05D006646 ORTHO05D008279 1.5e-31 140.6 218 43.6
Oeu008579.1 Olea europaea HOM05D006646 ORTHO05D008279 1.9e-31 140.2 150 56.7
PGSC0003DMG400003128 Solanum tuberosum HOM05D006646 ORTHO05D008279 2.5e-31 139.8 161 52.8
ATR0661G343 Amborella trichopoda HOM05D006646 ORTHO05D008279 3.3e-31 139.4 105 67.6
Sed0000071 Sechium edule HOM05D006646 ORTHO05D008279 3.3e-31 139.4 237 41.4
GSVIVG01024200001 Vitis vinifera HOM05D006646 ORTHO05D008279 3.3e-31 139.4 106 67.0
Peaxi162Scf00016g00142 Petunia axillaris HOM05D006646 ORTHO05D008279 4.3e-31 139.0 149 53.7
Psat0s2721g0040 Pisum sativum HOM05D006646 ORTHO05D008279 4.3e-31 139.0 217 42.9
TPR.G16241 Trifolium pratense HOM05D006646 ORTHO05D008279 4.3e-31 139.0 176 50.0
TAR376G0115 Trochodendron aralioides HOM05D006646 ORTHO05D008279 4.3e-31 139.0 135 57.0
ECA247G1974 Erigeron canadensis HOM05D006646 ORTHO05D008279 5.6e-31 138.7 168 48.2
Sed0001649 Sechium edule HOM05D006646 ORTHO05D008279 5.6e-31 138.7 218 43.1
CDE02G3850 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 7.3e-31 138.3 103 68.9
Atru.chr5.3116 Acer truncatum HOM05D006646 ORTHO05D008279 9.6e-31 137.9 152 51.3
Sc18g0005310 Simmondsia chinensis HOM05D006646 ORTHO05D008279 9.6e-31 137.9 101 69.3
Aqoxy6G02397 Aquilegia oxysepala HOM05D006646 ORTHO05D008279 1.3e-30 137.5 108 65.7
CDE09G0634 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 1.3e-30 137.5 157 53.5
Cc02_g17030 Coffea canephora HOM05D006646 ORTHO05D008279 1.3e-30 137.5 227 42.3
RcHm_v2.0_Chr6g0267071 Rosa chinensis HOM05D006646 ORTHO05D008279 1.3e-30 137.5 240 42.1
HanXRQChr05g0139661 Helianthus annuus HOM05D006646 ORTHO05D008279 2.1e-30 136.7 213 46.0
Medtr4g071330 Medicago truncatula HOM05D006646 ORTHO05D008279 2.1e-30 136.7 116 61.2
DCAR_022798 Daucus carota HOM05D006646 ORTHO05D008279 2.8e-30 136.3 220 43.2
MSTRG.16840 Avicennia marina HOM05D006646 ORTHO05D008279 3.6e-30 136.0 101 69.3
PSO541G0619 Papaver somniferum HOM05D006646 ORTHO05D008279 3.6e-30 136.0 236 43.2
SGA_v2.0_scaffold58G20474 Striga asiatica HOM05D006646 ORTHO05D008279 4.8e-30 135.6 220 44.5
Lsat_1_v5_gn_4_68441 Lactuca sativa HOM05D006646 ORTHO05D008279 8.1e-30 134.8 190 45.3
EL10Ac9g21659 Beta vulgaris HOM05D006646 ORTHO05D008279 1.1e-29 134.4 104 65.4
AUR62016804 Chenopodium quinoa HOM05D006646 ORTHO05D008279 1.1e-29 134.4 170 51.2
Ca_20923_v3 Cicer arietinum L. HOM05D006646 ORTHO05D008279 1.4e-29 134.0 190 46.8
FAN27G0283 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.0e-29 132.5 226 43.4
Haze_02302 Corylus avellana HOM05D006646 ORTHO05D008279 5.3e-29 132.1 158 50.6
Nitab4.5_0010034g0020 Nicotiana tabacum HOM05D006646 ORTHO05D008279 6.9e-29 131.7 224 42.4
Os10g0512500 Oryza sativa ssp. japonica HOM05D006646 ORTHO05D008279 1.2e-28 131.0 103 64.1
Hund06269 Selenicereus undatus HOM05D006646 ORTHO05D008279 2.0e-28 130.2 221 43.0
FvH4_2g10110 Fragaria vesca HOM05D006646 ORTHO05D008279 4.5e-28 129.0 215 42.8
FAN15G0580 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.5e-28 129.0 145 53.1
FAN24G1192 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.5e-28 129.0 215 42.8
HPP92_007403 Vanilla planifolia HOM05D006646 ORTHO05D008279 4.6e-25 119.0 158 47.5
Nitab4.5_0002723g0110 Nicotiana tabacum HOM05D006646 ORTHO05D008279 9.0e-21 104.8 207 39.6
Mapoly0113s0060 Marchantia polymorpha HOM05D006646 ORTHO05D008279 3.0e-16 89.7 99 44.4
BcaNung01286 Brassica carinata HOM05D006646 ORTHO05D008279 5.1e-16 89.0 68 69.1
arahy.Tifrunner.gnm1.ann1.1G50NI Arachis hypogaea HOM05D006646 ORTHO05D008279 6.7e-16 88.6 61 68.9
AUR62010412 Chenopodium quinoa HOM05D006646 ORTHO05D008279 8.7e-16 88.2 104 49.0
Pp3c1_22260 Physcomitrium patens HOM05D006646 ORTHO05D008279 1.4e-13 80.9 112 40.2
AagrBONN_evm.TU.Sc2ySwM_344.4239 Anthoceros agrestis HOM05D006646 ORTHO05D008279 2.4e-13 80.1 104 42.3
FAN05G0067 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.3e-11 74.3 53 69.8
FAN05G1359 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.3e-11 74.3 53 69.8
FAN09G3166 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.3e-11 74.3 54 68.5
FAN24G0918 Fragaria x ananassa HOM05D001806 ORTHO05D002069 1.3e-11 74.3 53 69.8
CBR_g11057 Chara braunii HOM05D006646 ORTHO05D008279 2.9e-11 73.2 144 34.7
FAN18G1095 Fragaria x ananassa HOM05D006646 ORTHO05D008279 3.8e-11 72.8 54 66.7
FAN19G2814 Fragaria x ananassa HOM05D006646 ORTHO05D008279 8.4e-11 71.6 52 69.2
CANSAT11G0453 Cannabis sativa HOM05D006646 ORTHO05D008279 5.5e-10 68.9 71 57.7
Haze_22123 Corylus avellana HOM05D006646 ORTHO05D008279 1.2e-09 67.8 50 72.0
Lj5P190T58 Lonicera japonica HOM05D006646 ORTHO05D008279 2.7e-09 66.6 50 68.0
SMO367G1025 Selaginella moellendorffii HOM05D006646 ORTHO05D008279 3.3e-07 59.7 78 41.0
Zm00001eb220380 Zea mays HOM05D006646 ORTHO05D008279 7.4e-07 58.5 137 39.4


User provided reference genes

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