Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G20870 Arabidopsis thaliana HOM05D006722 ORTHO05D007944 1.3e-73 279.6 141 100.0
AL3G54120 Arabidopsis lyrata HOM05D006722 ORTHO05D007944 2.3e-70 268.9 141 95.7
Carub.0003s3553 Capsella rubella HOM05D006722 ORTHO05D007944 4.9e-65 251.1 141 87.2
Thhalv10002109m.g Eutrema salsugineum HOM05D006722 ORTHO05D007944 4.2e-64 248.1 143 88.1
Sp3g34120 Schrenkiella parvula HOM05D006722 ORTHO05D007944 8.1e-60 233.8 147 81.6
BcaB08g34945 Brassica carinata HOM05D006722 ORTHO05D007944 1.4e-59 233.0 148 81.1
BcaC07g41191 Brassica carinata HOM05D006722 ORTHO05D007944 6.9e-59 230.7 148 80.4
C08p41970 Brassica napus HOM05D006722 ORTHO05D007944 6.9e-59 230.7 148 80.4
BolC8t51760H Brassica oleracea HOM05D006722 ORTHO05D007944 6.9e-59 230.7 148 80.4
A09p58680 Brassica napus HOM05D006722 ORTHO05D007944 9.0e-59 230.3 148 81.1
CARHR111610 Cardamine hirsuta HOM05D006722 ORTHO05D007944 1.5e-58 229.6 143 81.1
BraA09t41254Z Brassica rapa HOM05D006722 ORTHO05D007944 2.0e-58 229.2 148 80.4
Aa31LG8G17780 Aethionema arabicum HOM05D006722 ORTHO05D007944 3.9e-54 214.9 141 78.7
THA.LOC104824711 Tarenaya hassleriana HOM05D006722 ORTHO05D007944 2.2e-41 172.6 144 65.3
Sp7g26110 Schrenkiella parvula HOM05D006722 ORTHO05D007944 4.1e-19 98.6 142 43.0
BolC7t46077H Brassica oleracea HOM05D006722 ORTHO05D007944 3.4e-18 95.5 141 41.8
BraA01t01892Z Brassica rapa HOM05D006722 ORTHO05D007944 4.5e-18 95.1 143 42.7
Thhalv10027152m.g Eutrema salsugineum HOM05D006722 ORTHO05D007944 4.5e-18 95.1 142 40.8
C07p56000 Brassica napus HOM05D006722 ORTHO05D007944 1.0e-17 94.0 141 41.8
A01p19570 Brassica napus HOM05D006722 ORTHO05D007944 1.3e-17 93.6 143 44.1
A03p57860 Brassica napus HOM05D006722 ORTHO05D007944 1.3e-17 93.6 141 41.1
BraA03t14850Z Brassica rapa HOM05D006722 ORTHO05D007944 1.3e-17 93.6 141 41.1
AL7G24440 Arabidopsis lyrata HOM05D006722 ORTHO05D007944 6.5e-17 91.3 143 42.7
BcaNung01592 Brassica carinata HOM05D006722 ORTHO05D007944 1.2e-15 87.0 142 40.8
BcaC06g32641 Brassica carinata HOM05D006722 ORTHO05D007944 6.1e-15 84.7 97 48.5
CARHR235870 Cardamine hirsuta HOM05D006722 ORTHO05D007944 6.1e-15 84.7 86 50.0
AT4G28160 Arabidopsis thaliana HOM05D006722 ORTHO05D007944 1.4e-14 83.6 106 43.4
Duzib132G0356 Durio zibethinus HOM05D006722 ORTHO05D007944 5.2e-14 81.6 134 42.5
Carub.0007s1261 Capsella rubella HOM05D006722 ORTHO05D007944 1.5e-13 80.1 108 40.7
Thecc.02G175500 Theobroma cacao HOM05D006722 ORTHO05D007944 3.3e-13 79.0 126 42.1
BcaC09g50509 Brassica carinata HOM05D006722 ORTHO05D007944 5.7e-13 78.2 114 42.1
Rhsim06G0148700 Rhododendron simsii HOM05D006722 ORTHO05D007944 1.7e-12 76.6 131 40.5
Migut.H01052 Erythranthe guttata HOM05D006722 ORTHO05D007944 2.8e-12 75.9 140 40.7
Hma1.2p1_0875F.1_g231440 Hydrangea macrophylla HOM05D006722 ORTHO05D007944 6.3e-12 74.7 136 41.2
MSTRG.14198 Avicennia marina HOM05D006722 ORTHO05D007944 1.1e-11 73.9 130 40.8
DCAR_006245 Daucus carota HOM05D006722 ORTHO05D007944 1.1e-11 73.9 123 43.9
TWI36G1477 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 1.8e-11 73.2 112 41.1
BolC1t02409H Brassica oleracea HOM05D006722 ORTHO05D007944 2.4e-11 72.8 114 40.4
Oeu029925.1 Olea europaea HOM05D006722 ORTHO05D007944 2.4e-11 72.8 125 40.8
TWI75G0677 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 2.4e-11 72.8 138 42.8
COL.COLO4_35406 Corchorus olitorius HOM05D006722 ORTHO05D007944 4.1e-11 72.0 134 37.3
Atru.chr6.3036 Acer truncatum HOM05D006722 ORTHO05D007944 1.2e-10 70.5 122 36.9
Migut.H01053 Erythranthe guttata HOM05D006722 ORTHO05D007944 2.0e-10 69.7 131 38.2
Oeu029927.1 Olea europaea HOM05D006722 ORTHO05D007944 2.0e-10 69.7 125 39.2
Duzib052G0119 Durio zibethinus HOM05D006722 ORTHO05D007944 2.6e-10 69.3 134 38.8
Duzib052G0455 Durio zibethinus HOM05D006722 ORTHO05D007944 2.6e-10 69.3 134 38.8
Cpa.g.sc34.125 Carica papaya HOM05D006722 ORTHO05D007944 4.5e-10 68.6 209 30.1
DCAR_023670 Daucus carota HOM05D006722 ORTHO05D007944 4.5e-10 68.6 140 37.9
Migut.H01051 Erythranthe guttata HOM05D006722 ORTHO05D007944 4.5e-10 68.6 113 40.7
CANSAT64G0061 Cannabis sativa HOM05D006722 ORTHO05D007944 7.7e-10 67.8 125 39.2
FAN14G5843 Fragaria x ananassa HOM05D006722 ORTHO05D007944 1.3e-09 67.0 122 42.6
Lj8C115G8 Lonicera japonica HOM05D000389 ORTHO05D000287 1.7e-09 66.6 136 37.5
CSS0036536 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 2.2e-09 66.2 109 43.1
Lalb_Chr14g0366741 Lupinus albus HOM05D006722 ORTHO05D007944 2.2e-09 66.2 136 41.2
Lsat_1_v5_gn_4_70120 Lactuca sativa HOM05D006722 ORTHO05D007944 2.9e-09 65.9 139 38.8
CSS0017413 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 5.0e-09 65.1 140 42.1
CSS0029289 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 5.0e-09 65.1 103 44.7
Rhsim06G0148800 Rhododendron simsii HOM05D006722 ORTHO05D007944 5.0e-09 65.1 133 34.6
Actinidia09877 Actinidia chinensis HOM05D006722 ORTHO05D007944 8.5e-09 64.3 133 34.6
Sopen07g028260 Solanum pennellii HOM05D006722 ORTHO05D007944 8.5e-09 64.3 99 42.4
ECA246G2923 Erigeron canadensis HOM05D006722 ORTHO05D007944 1.1e-08 63.9 94 45.7
Glyma.13G299400 Glycine max HOM05D006722 ORTHO05D007944 1.1e-08 63.9 131 38.2
HanXRQChr17g0559971 Helianthus annuus HOM05D006722 ORTHO05D007944 1.1e-08 63.9 130 39.2
Solyc07g054310.3 Solanum lycopersicum HOM05D006722 ORTHO05D007944 1.5e-08 63.5 99 41.4
Lj3g0001103 Lotus japonicus HOM05D006722 ORTHO05D007944 4.2e-08 62.0 121 34.7
Gohir.A03G158500 Gossypium hirsutum HOM05D006722 ORTHO05D007944 5.5e-08 61.6 134 37.3
Gohir.D02G181700 Gossypium hirsutum HOM05D006722 ORTHO05D007944 5.5e-08 61.6 134 37.3
Gorai.005G204200 Gossypium raimondii HOM05D006722 ORTHO05D007944 5.5e-08 61.6 134 37.3
RcHm_v2.0_Chr2g0162351 Rosa chinensis HOM05D006722 ORTHO05D007944 5.5e-08 61.6 135 38.5
Prupe.3G234900 Prunus persica HOM05D006722 ORTHO05D007944 1.2e-07 60.5 144 34.7
Lsat_1_v5_gn_3_39421 Lactuca sativa HOM05D006722 ORTHO05D007944 1.6e-07 60.1 89 47.2
HanXRQChr10g0289571 Helianthus annuus HOM05D006722 ORTHO05D007944 2.1e-07 59.7 122 42.6
MD17G1079900 Malus domestica HOM05D006722 ORTHO05D007944 2.7e-07 59.3 135 38.5
Ciclev10017219m.g Citrus clementina HOM05D006722 ORTHO05D007944 4.7e-07 58.5 124 35.5
Peaxi162Scf00132g00074 Petunia axillaris HOM05D006722 ORTHO05D007944 4.7e-07 58.5 131 38.9
Gohir.D12G141200 Gossypium hirsutum HOM05D006722 ORTHO05D007944 8.0e-07 57.8 118 38.1
Lj3g0012520 Lotus japonicus HOM05D006722 ORTHO05D007944 1.0e-06 57.4 128 35.2
DCAR_006246 Daucus carota HOM05D006722 ORTHO05D007944 1.4e-06 57.0 126 39.7
Medtr4g037480 Medicago truncatula HOM05D006722 ORTHO05D007944 5.2e-06 55.1 125 32.0
Eucgr.A01793 Eucalyptus grandis HOM05D006722 ORTHO05D007944 6.7e-06 54.7 124 35.5


User provided reference genes

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