Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G20510 Arabidopsis thaliana HOM05D004208 ORTHO05D005156 8.3e-272 939.9 510 100.0
AL3G53520 Arabidopsis lyrata HOM05D004208 ORTHO05D005156 1.1e-231 806.6 478 89.3
AL4G32160 Arabidopsis lyrata HOM05D004208 ORTHO05D005156 6.1e-190 667.9 477 73.6
Carub.0003s3496 Capsella rubella HOM05D004208 ORTHO05D005156 8.8e-189 664.1 478 75.3
AT2G36070 Arabidopsis thaliana HOM05D004208 ORTHO05D005156 3.3e-188 662.1 477 73.2
Carub.0004s1781 Capsella rubella HOM05D004208 ORTHO05D005156 6.1e-182 641.3 476 71.0
Aa31LG8G17460 Aethionema arabicum HOM05D004208 ORTHO05D005156 5.0e-176 621.7 485 67.2
Thhalv10001977m.g Eutrema salsugineum HOM05D004208 ORTHO05D005156 4.7e-174 615.1 484 69.6
Sp3g33730 Schrenkiella parvula HOM05D004208 ORTHO05D005156 4.4e-164 582.0 483 65.6
BolC7t40497H Brassica oleracea HOM05D004208 ORTHO05D005156 5.4e-162 575.1 480 68.8
BcaC06g36740 Brassica carinata HOM05D004208 ORTHO05D005156 5.9e-161 571.6 480 68.8
BraA09t36939Z Brassica rapa HOM05D004208 ORTHO05D005156 1.3e-160 570.5 477 65.8
BraA07t27815Z Brassica rapa HOM05D004208 ORTHO05D005156 2.3e-160 569.7 504 63.7
BcaB07g31584 Brassica carinata HOM05D004208 ORTHO05D005156 1.9e-159 566.6 466 65.7
A07p00220 Brassica napus HOM05D004208 ORTHO05D005156 4.7e-158 562.0 482 65.6
A09p12940 Brassica napus HOM05D004208 ORTHO05D005156 4.7e-158 562.0 477 65.4
C09p15320 Brassica napus HOM05D004208 ORTHO05D005156 8.0e-158 561.2 478 65.3
BcaB03g16846 Brassica carinata HOM05D004208 ORTHO05D005156 6.8e-157 558.1 481 64.4
BcaC04g22784 Brassica carinata HOM05D004208 ORTHO05D005156 4.4e-156 555.4 478 65.1
BolC9t54440H Brassica oleracea HOM05D004208 ORTHO05D005156 9.8e-156 554.3 480 64.4
Gohir.A08G190100 Gossypium hirsutum HOM05D004208 ORTHO05D005156 2.9e-155 552.7 485 60.4
COL.COLO4_05893 Corchorus olitorius HOM05D004208 ORTHO05D005156 3.7e-155 552.4 495 60.4
Gohir.D08G208600 Gossypium hirsutum HOM05D004208 ORTHO05D005156 4.9e-155 552.0 486 60.3
Gorai.004G221000 Gossypium raimondii HOM05D004208 ORTHO05D005156 4.9e-155 552.0 486 60.3
Thecc.01G258100 Theobroma cacao HOM05D004208 ORTHO05D005156 1.4e-154 550.4 486 59.9
BcaB08g34912 Brassica carinata HOM05D004208 ORTHO05D005156 7.0e-154 548.1 476 63.7
Duzib138G0474 Durio zibethinus HOM05D004208 ORTHO05D005156 1.2e-153 547.4 486 59.9
CARHR130310 Cardamine hirsuta HOM05D004208 ORTHO05D005156 5.0e-152 542.0 475 63.8
Manes.12G032400 Manihot esculenta HOM05D004208 ORTHO05D005156 3.3e-151 539.3 486 58.6
C07p00510 Brassica napus HOM05D004208 ORTHO05D005156 5.6e-151 538.5 480 65.0
Duzib133G1203 Durio zibethinus HOM05D004208 ORTHO05D005156 1.8e-149 533.5 486 58.2
Dinv22405 Davidia involucrata HOM05D004208 ORTHO05D005156 1.3e-147 527.3 492 56.5
Ciclev10019992m.g Citrus clementina HOM05D004208 ORTHO05D005156 4.1e-146 522.3 481 61.5
Atru.chr5.1689 Acer truncatum HOM05D004208 ORTHO05D005156 2.7e-145 519.6 481 59.5
Manes.13G034400 Manihot esculenta HOM05D004208 ORTHO05D005156 4.6e-145 518.8 486 56.2
PGR031G1029 Punica granatum HOM05D004208 ORTHO05D005156 3.0e-144 516.2 490 55.9
Cfa012194 Carpinus fangiana HOM05D004208 ORTHO05D005156 5.6e-143 511.9 467 57.8
Hma1.2p1_0273F.1_g109690 Hydrangea macrophylla HOM05D004208 ORTHO05D005156 5.6e-143 511.9 489 58.5
Prupe.8G223600 Prunus persica HOM05D004208 ORTHO05D005156 7.3e-143 511.5 486 56.4
CSS0041954 Camellia sinensis var. sinensis HOM05D004208 ORTHO05D005156 9.5e-143 511.1 490 57.1
TWI32G0756 Tripterygium wilfordii HOM05D004208 ORTHO05D005156 1.6e-142 510.4 486 59.9
GSVIVG01028335001 Vitis vinifera HOM05D004208 ORTHO05D005156 2.1e-142 510.0 487 59.1
Actinidia25791 Actinidia chinensis HOM05D004208 ORTHO05D005156 6.2e-142 508.4 505 54.1
TAR636G1466 Trochodendron aralioides HOM05D004208 ORTHO05D005156 1.1e-141 507.7 488 55.1
THA.LOC104805532 Tarenaya hassleriana HOM05D004208 ORTHO05D005156 1.4e-141 507.3 487 61.6
CSS0038412 Camellia sinensis var. sinensis HOM05D004208 ORTHO05D005156 1.8e-141 506.9 490 57.3
CiPaw.11G131900 Carya illinoinensis HOM05D004208 ORTHO05D005156 1.7e-139 500.4 467 56.5
Potri.002G038300 Populus trichocarpa HOM05D004208 ORTHO05D005156 2.2e-139 500.0 491 56.2
CANSAT01G2107 Cannabis sativa HOM05D004208 ORTHO05D005156 6.4e-139 498.4 492 54.7
QL12p032241 Quercus lobata HOM05D004208 ORTHO05D005156 6.4e-139 498.4 460 60.7
Actinidia07297 Actinidia chinensis HOM05D004208 ORTHO05D005156 1.1e-138 497.7 492 55.5
Lj2A1151T32 Lonicera japonica HOM05D004208 ORTHO05D005156 2.4e-138 496.5 495 55.4
Sed0003224 Sechium edule HOM05D004208 ORTHO05D005156 2.4e-138 496.5 486 55.1
Potri.005G224500 Populus trichocarpa HOM05D004208 ORTHO05D005156 4.1e-138 495.7 486 56.0
Haze_08822 Corylus avellana HOM05D004208 ORTHO05D005156 1.2e-137 494.2 498 55.0
CsaV3_5G028820 Cucumis sativus L. HOM05D004208 ORTHO05D005156 1.2e-137 494.2 487 54.6
FAN17G2653 Fragaria x ananassa HOM05D004208 ORTHO05D005156 5.1e-136 488.8 486 53.3
RcHm_v2.0_Chr6g0288111 Rosa chinensis HOM05D004208 ORTHO05D005156 8.6e-136 488.0 486 55.8
Sabra05G0173200 Salix brachista HOM05D004208 ORTHO05D005156 5.6e-135 485.3 499 53.3
Solyc01g098230.3 Solanum lycopersicum HOM05D004208 ORTHO05D005156 7.3e-135 485.0 499 53.7
Sopen01g041810 Solanum pennellii HOM05D004208 ORTHO05D005156 1.2e-134 484.2 499 53.7
Glyma.04G107400 Glycine max HOM05D004208 ORTHO05D005156 1.1e-133 481.1 486 56.8
FvH4_4g12040 Fragaria vesca HOM05D004208 ORTHO05D005156 1.4e-133 480.7 486 52.9
CDE03G0182 Ceratophyllum demersum HOM05D004208 ORTHO05D005156 1.8e-133 480.3 484 53.5
Sabra02G0030700 Salix brachista HOM05D004208 ORTHO05D005156 4.0e-133 479.2 449 57.7
Peaxi162Scf00225g00519 Petunia axillaris HOM05D004208 ORTHO05D005156 6.8e-133 478.4 514 52.5
Sed0002598 Sechium edule HOM05D004208 ORTHO05D005156 2.0e-132 476.9 483 53.2
FAN07G0785 Fragaria x ananassa HOM05D004208 ORTHO05D005156 7.6e-132 474.9 517 49.7
PSO339G3828 Papaver somniferum HOM05D004208 ORTHO05D005156 2.9e-131 473.0 493 52.1
Migut.O00608 Erythranthe guttata HOM05D004208 ORTHO05D005156 4.9e-131 472.2 504 53.2
Migut.N01348 Erythranthe guttata HOM05D004208 ORTHO05D005156 1.1e-130 471.1 504 53.2
CAN.G134.214 Capsicum annuum HOM05D004208 ORTHO05D005156 9.2e-130 468.0 494 52.0
Cc01_g18340 Coffea canephora HOM05D004208 ORTHO05D005156 2.7e-129 466.5 503 52.3
AUR62038602 Chenopodium quinoa HOM05D004208 ORTHO05D005156 4.6e-129 465.7 488 52.9
Eucgr.G01944 Eucalyptus grandis HOM05D004208 ORTHO05D005156 1.7e-128 463.8 418 57.9
AUR62030125 Chenopodium quinoa HOM05D004208 ORTHO05D005156 2.3e-128 463.4 488 52.5
Phvul.005G002100 Phaseolus vulgaris HOM05D004208 ORTHO05D005156 3.0e-128 463.0 486 56.2
FvH4_2g21470 Fragaria vesca HOM05D004208 ORTHO05D005156 3.9e-128 462.6 486 53.7
FAN20G2986 Fragaria x ananassa HOM05D004208 ORTHO05D005156 3.9e-128 462.6 476 53.2
FAN27G3501 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.9e-127 460.3 472 53.2
Rhsim01G0263600 Rhododendron simsii HOM05D004208 ORTHO05D005156 2.5e-127 459.9 493 54.2
MD05G1197100 Malus domestica HOM05D004208 ORTHO05D005156 7.3e-127 458.4 494 50.8
FAN15G2877 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.6e-126 457.2 509 50.5
Ah.03g147410 Amaranthus hybridus HOM05D004208 ORTHO05D005156 2.8e-126 456.4 489 51.7
SalBow1G3185 Salvia bowleyana HOM05D004208 ORTHO05D005156 5.2e-125 452.2 494 50.8
Actinidia09547 Actinidia chinensis HOM05D004208 ORTHO05D005156 9.0e-125 451.4 483 50.9
Ah.02g120380 Amaranthus hybridus HOM05D004208 ORTHO05D005156 1.5e-124 450.7 488 51.4
Nitab4.5_0000245g0150 Nicotiana tabacum HOM05D004208 ORTHO05D005156 2.0e-124 450.3 491 50.5
FAN24G2300 Fragaria x ananassa HOM05D004208 ORTHO05D005156 7.6e-124 448.4 464 52.6
Nn3g19657 Nelumbo nucifera HOM05D004208 ORTHO05D005156 9.9e-124 448.0 488 54.1
SGA_v2.0_scaffold32G13335 Striga asiatica HOM05D004208 ORTHO05D005156 9.9e-124 448.0 489 51.7
VMungo1080G0701 Vigna mungo HOM05D004208 ORTHO05D005156 9.9e-124 448.0 487 54.6
Psat7g228960 Pisum sativum HOM05D004208 ORTHO05D005156 1.3e-123 447.6 488 50.6
Cpa.g.sc81.94 Carica papaya HOM05D004208 ORTHO05D005156 6.4e-123 445.3 491 53.0
Lsat_1_v5_gn_7_79121 Lactuca sativa HOM05D004208 ORTHO05D005156 8.4e-123 444.9 491 50.5
ATR0736G190 Amborella trichopoda HOM05D004208 ORTHO05D005156 1.1e-122 444.5 488 49.2
SGA_v2.0_scaffold58G20323 Striga asiatica HOM05D004208 ORTHO05D005156 7.1e-122 441.8 400 58.5
HanXRQChr16g0512021 Helianthus annuus HOM05D004208 ORTHO05D005156 2.7e-121 439.9 493 52.1
RcHm_v2.0_Chr4g0409381 Rosa chinensis HOM05D004208 ORTHO05D005156 6.0e-121 438.7 433 53.8
Peaxi162Scf00225g00527 Petunia axillaris HOM05D004208 ORTHO05D005156 3.9e-120 436.0 495 49.9
Ca_26001_v3 Cicer arietinum L. HOM05D004208 ORTHO05D005156 8.7e-120 434.9 493 49.9
EL10Ac7g17258 Beta vulgaris HOM05D004208 ORTHO05D005156 1.5e-119 434.1 440 53.2
DCAR_005689 Daucus carota HOM05D004208 ORTHO05D005156 1.5e-119 434.1 506 47.0
MSTRG.16949 Avicennia marina HOM05D004208 ORTHO05D005156 1.9e-119 433.7 487 49.9
Aqoxy2G03649 Aquilegia oxysepala HOM05D004208 ORTHO05D005156 3.6e-118 429.5 489 47.4
Oeu062471.2 Olea europaea HOM05D004208 ORTHO05D005156 3.6e-118 429.5 546 48.5
Dinv34629 Davidia involucrata HOM05D004208 ORTHO05D005156 6.2e-118 428.7 425 54.4
TWI34G1830 Tripterygium wilfordii HOM05D004208 ORTHO05D005156 2.4e-117 426.8 483 53.0
arahy.Tifrunner.gnm1.ann1.W57KUE Arachis hypogaea HOM05D004208 ORTHO05D005156 2.2e-115 420.2 519 50.5
Medtr2g083690 Medicago truncatula HOM05D004208 ORTHO05D005156 3.8e-115 419.5 486 49.4
TAR362G0204 Trochodendron aralioides HOM05D004208 ORTHO05D005156 6.4e-115 418.7 445 51.5
Lalb_Chr15g0090311 Lupinus albus HOM05D004208 ORTHO05D005156 9.3e-114 414.8 493 51.9
Zm00001eb111900 Zea mays HOM05D004208 ORTHO05D005156 3.5e-113 412.9 470 48.9
MELO3C033986.2 Cucumis melo HOM05D004208 ORTHO05D005156 3.9e-112 409.5 581 43.2
Eucgr.B01552 Eucalyptus grandis HOM05D004208 ORTHO05D005156 1.9e-111 407.1 507 46.7
MBI10_g22594_MAGBIO Magnolia biondii HOM05D004208 ORTHO05D005156 5.6e-111 405.6 469 52.0
CSS0015888 Camellia sinensis var. sinensis HOM05D004208 ORTHO05D005156 1.3e-110 404.4 513 49.3
Nitab4.5_0001165g0160 Nicotiana tabacum HOM05D004208 ORTHO05D005156 2.4e-109 400.2 454 50.2
FAN12G3775 Fragaria x ananassa HOM05D004208 ORTHO05D005156 9.0e-109 398.3 534 43.8
FAN12G0345 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.2e-108 397.9 534 43.8
HPP92_012187 Vanilla planifolia HOM05D004208 ORTHO05D005156 2.2e-107 393.7 449 49.0
arahy.Tifrunner.gnm1.ann1.M6MGA2 Arachis hypogaea HOM05D004208 ORTHO05D005156 2.4e-106 390.2 486 50.2
BcaC07g41210 Brassica carinata HOM05D004208 ORTHO05D005156 5.1e-104 382.5 401 58.1
TPR.G5025 Trifolium pratense HOM05D004208 ORTHO05D005156 1.9e-103 380.6 401 50.4
CDE04G1955 Ceratophyllum demersum HOM05D004208 ORTHO05D005156 2.5e-103 380.2 386 52.6
Medtr4g075680 Medicago truncatula HOM05D004208 ORTHO05D005156 1.6e-102 377.5 490 46.1
ECA236G3853 Erigeron canadensis HOM05D004208 ORTHO05D000364 5.8e-100 369.0 452 48.5
Os07g0409700 Oryza sativa ssp. japonica HOM05D004208 ORTHO05D005156 3.5e-97 359.8 461 44.9
Medtr4g029490 Medicago truncatula HOM05D004208 ORTHO05D005156 2.5e-95 353.6 475 44.8
Oeu042777.2 Olea europaea HOM05D004208 ORTHO05D005156 4.8e-94 349.4 498 44.8
Lj6g0013651 Lotus japonicus HOM05D004208 ORTHO05D005156 4.5e-92 342.8 488 42.4
Nitab4.5_0001526g0060 Nicotiana tabacum HOM05D004208 ORTHO05D005156 4.6e-89 332.8 449 45.4
Peaxi162Scf00118g00111 Petunia axillaris HOM05D004208 ORTHO05D005156 7.7e-84 315.5 395 46.6
PGSC0003DMG400022489 Solanum tuberosum HOM05D004208 ORTHO05D005156 2.9e-83 313.5 216 69.4
Nitab4.5_0007798g0030 Nicotiana tabacum HOM05D004208 ORTHO05D005156 2.5e-82 310.5 493 42.6
CBR_g30902 Chara braunii HOM05D004208 ORTHO05D005156 4.2e-82 309.7 473 38.9
ClCG01G005870 Citrullus lanatus HOM05D004208 ORTHO05D005156 1.1e-79 301.6 216 66.2
SMO353G0191 Selaginella moellendorffii HOM05D004208 ORTHO05D005156 2.4e-77 293.9 437 41.4
Oeu021968.1 Olea europaea HOM05D004208 ORTHO05D005156 5.0e-75 286.2 482 40.0
Mapoly0070s0010 Marchantia polymorpha HOM05D004208 ORTHO05D005156 1.1e-74 285.0 371 44.5
SEGI_36648 Sequoiadendron giganteum HOM05D004208 ORTHO05D005156 6.1e-73 279.3 411 42.8
unitig_746.g26574 Utricularia gibba HOM05D004208 ORTHO05D005156 1.1e-71 275.0 222 56.8
Sc05g0000700 Simmondsia chinensis HOM05D004208 ORTHO05D005156 9.7e-71 271.9 342 48.5
AagrBONN_evm.TU.Sc2ySwM_344.3623 Anthoceros agrestis HOM05D004208 ORTHO05D005156 1.7e-67 261.2 288 46.9
Pp3c4_19960 Physcomitrium patens HOM05D004208 ORTHO05D005156 1.9e-66 257.7 365 40.5
Pp3c12_7570 Physcomitrium patens HOM05D004208 ORTHO05D005156 3.6e-65 253.4 365 40.8
Lalb_Chr06g0171061 Lupinus albus HOM05D004208 ORTHO05D005156 2.0e-60 237.7 176 63.1
SEGI_05587 Sequoiadendron giganteum HOM05D004208 ORTHO05D005156 5.0e-43 179.9 135 60.7
Actinidia37513 Actinidia chinensis HOM05D004208 ORTHO05D005156 1.5e-42 178.3 156 56.4
MCO02G332 Micromonas commoda HOM05D004208 ORTHO05D005156 1.0e-40 172.2 363 33.1
Lalb_Chr06g0171071 Lupinus albus HOM05D004208 ORTHO05D005156 2.3e-40 171.0 315 46.0
HanXRQChr10g0294161 Helianthus annuus HOM05D004208 ORTHO05D005156 2.4e-37 161.0 214 46.7
PRCOL_00004598 Prasinoderma coloniale HOM05D004208 ORTHO05D005156 2.3e-32 144.4 190 37.9
RcHm_v2.0_Chr5g0013581 Rosa chinensis HOM05D004208 ORTHO05D005156 4.1e-29 133.7 94 62.8
SHI09778 Sapria himalayana HOM05D004208 ORTHO05D005156 4.1e-29 133.7 270 35.9
Cre16.g660800 Chlamydomonas reinhardtii HOM05D004208 ORTHO05D005156 4.6e-28 130.2 244 28.3
CAN.G279.25 Capsicum annuum HOM05D004208 ORTHO05D005156 2.3e-27 127.9 173 45.7
Glyma.09G002800 Glycine max HOM05D004208 ORTHO05D005156 1.3e-22 112.1 76 65.8
SEGI_40921 Sequoiadendron giganteum HOM05D004208 ORTHO05D005156 1.8e-16 91.7 68 58.8
Rhsim01G0263500 Rhododendron simsii HOM05D004208 ORTHO05D005156 3.1e-16 90.9 122 45.1
Cfa026408 Carpinus fangiana HOM05D004208 ORTHO05D121639 3.8e-14 84.0 269 27.1
Aqoxy5G04369 Aquilegia oxysepala HOM05D004870 ORTHO05D006061 7.8e-12 76.3 116 41.4
Atru.chr3.4028 Acer truncatum HOM05D004208 ORTHO05D005156 3.9e-11 73.9 60 56.7
QL04p049599 Quercus lobata HOM05D000196 ORTHO05D000279 3.4e-07 60.8 43 67.4
CDE04G1040 Ceratophyllum demersum HOM05D004208 ORTHO05D005156 2.2e-06 58.2 77 37.7


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