Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G20210 Arabidopsis thaliana HOM05D006061 ORTHO05D007450 0.0e+00 1201.0 605 100.0
AL3G47870 Arabidopsis lyrata HOM05D006061 ORTHO05D007450 0.0e+00 1109.4 605 92.7
Thhalv10001935m.g Eutrema salsugineum HOM05D006061 ORTHO05D007450 1.6e-290 1002.3 605 84.0
C07p00980 Brassica napus HOM05D006061 ORTHO05D007450 2.6e-288 995.0 606 82.3
BcaC06g36697 Brassica carinata HOM05D006061 ORTHO05D007450 5.7e-288 993.8 606 82.3
BolC7t40535H Brassica oleracea HOM05D006061 ORTHO05D007450 5.7e-288 993.8 606 82.3
A07p00530 Brassica napus HOM05D006061 ORTHO05D007450 2.2e-287 991.9 607 82.2
BraA07t27847Z Brassica rapa HOM05D006061 ORTHO05D007450 9.2e-286 986.5 608 81.6
BcaB03g16813 Brassica carinata HOM05D006061 ORTHO05D007450 1.6e-285 985.7 605 81.5
Aa31LG8G17130 Aethionema arabicum HOM05D006061 ORTHO05D007450 4.4e-256 887.9 605 75.4
Carub.0003s3454 Capsella rubella HOM05D006061 ORTHO05D007450 1.3e-234 816.6 479 87.7
Sp3g33450 Schrenkiella parvula HOM05D006061 ORTHO05D007450 3.9e-228 795.0 479 85.0
THA.LOC104814544 Tarenaya hassleriana HOM05D006061 ORTHO05D007450 3.3e-227 792.0 606 68.0
Atru.chr5.1926 Acer truncatum HOM05D006061 ORTHO05D007450 1.6e-173 613.6 613 56.0
Thecc.01G244800 Theobroma cacao HOM05D006061 ORTHO05D007450 4.0e-172 609.0 613 56.1
Duzib138G1183 Durio zibethinus HOM05D006061 ORTHO05D007450 2.2e-170 603.2 613 55.3
Gorai.007G151600 Gossypium raimondii HOM05D006061 ORTHO05D007450 1.4e-164 583.9 611 54.2
Gohir.A11G135100 Gossypium hirsutum HOM05D006061 ORTHO05D007450 2.6e-163 579.7 614 53.7
Potri.014G194800 Populus trichocarpa HOM05D006061 ORTHO05D007450 7.5e-163 578.2 613 53.2
Gohir.D11G141300 Gossypium hirsutum HOM05D006061 ORTHO05D007450 3.2e-161 572.8 614 53.7
Prupe.8G209500 Prunus persica HOM05D006061 ORTHO05D007450 5.4e-161 572.0 610 51.6
Eucgr.H00824 Eucalyptus grandis HOM05D006061 ORTHO05D007450 1.9e-158 563.5 610 50.5
Cfa002517 Carpinus fangiana HOM05D006061 ORTHO05D007450 6.8e-156 555.1 613 53.0
Ciclev10019392m.g Citrus clementina HOM05D006061 ORTHO05D007450 6.4e-154 548.5 613 51.9
MD10G1171000 Malus domestica HOM05D006061 ORTHO05D007450 1.3e-151 540.8 607 49.8
Sabra14G0142900 Salix brachista HOM05D006061 ORTHO05D007450 1.9e-150 537.0 584 53.3
TAR365G1230 Trochodendron aralioides HOM05D006061 ORTHO05D007450 3.3e-150 536.2 630 49.0
Actinidia30104 Actinidia chinensis HOM05D006061 ORTHO05D007450 6.8e-148 528.5 619 48.8
TWI59G0704 Tripterygium wilfordii HOM05D006061 ORTHO05D007450 2.9e-146 523.1 615 49.4
ClCG09G009420 Citrullus lanatus HOM05D006061 ORTHO05D007450 2.4e-145 520.0 614 49.5
CsaV3_7G025440 Cucumis sativus L. HOM05D006061 ORTHO05D007450 9.2e-145 518.1 612 49.7
COL.COLO4_08163 Corchorus olitorius HOM05D006061 ORTHO05D007450 2.7e-144 516.5 660 47.7
RcHm_v2.0_Chr6g0285561 Rosa chinensis HOM05D006061 ORTHO05D007450 2.7e-144 516.5 613 49.4
PGR083G1193 Punica granatum HOM05D006061 ORTHO05D007450 1.6e-141 507.3 612 48.9
Ca_08767_v3 Cicer arietinum L. HOM05D006061 ORTHO05D007450 1.1e-140 504.6 615 48.3
Lj1g0026990 Lotus japonicus HOM05D006061 ORTHO05D007450 1.4e-140 504.2 613 48.8
CiPaw.04G108700 Carya illinoinensis HOM05D006061 ORTHO05D007450 1.2e-139 501.1 524 54.0
FvH4_2g19870 Fragaria vesca HOM05D006061 ORTHO05D007450 1.7e-138 497.3 616 47.7
Glyma.19G171100 Glycine max HOM05D006061 ORTHO05D007450 2.9e-138 496.5 608 48.8
Sc05g0002480 Simmondsia chinensis HOM05D006061 ORTHO05D007450 6.4e-138 495.4 624 46.3
TPR.G7560 Trifolium pratense HOM05D006061 ORTHO05D007450 1.4e-137 494.2 618 47.4
Nn1g03086 Nelumbo nucifera HOM05D006061 ORTHO05D007450 7.1e-137 491.9 629 46.6
Phvul.001G168300 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 2.7e-136 490.0 618 48.7
PGSC0003DMG401020085 Solanum tuberosum HOM05D006061 ORTHO05D007450 4.6e-136 489.2 629 47.4
AUR62008856 Chenopodium quinoa HOM05D006061 ORTHO05D007450 6.0e-136 488.8 624 46.0
GSVIVG01028489001 Vitis vinifera HOM05D006061 ORTHO05D007450 1.0e-135 488.0 574 48.4
CANSAT01G1389 Cannabis sativa HOM05D006061 ORTHO05D007450 3.0e-135 486.5 613 47.6
Glyma.03G169900 Glycine max HOM05D006061 ORTHO05D007450 3.3e-134 483.0 611 48.6
Solyc06g083640.4 Solanum lycopersicum HOM05D006061 ORTHO05D007450 4.3e-134 482.6 627 47.2
Sopen06g035030 Solanum pennellii HOM05D006061 ORTHO05D007450 1.3e-133 481.1 627 47.2
SGA_v2.0_scaffold3G01591 Striga asiatica HOM05D006061 ORTHO05D007450 1.6e-133 480.7 641 46.0
Psat3g050240 Pisum sativum HOM05D006061 ORTHO05D007450 3.6e-133 479.6 612 46.2
MSTRG.12506 Avicennia marina HOM05D006061 ORTHO05D007450 1.4e-132 477.6 630 45.6
CARHR110700 Cardamine hirsuta HOM05D006061 ORTHO05D007450 1.4e-132 477.6 271 89.7
EL10Ac7g17761 Beta vulgaris HOM05D006061 ORTHO05D007450 3.1e-132 476.5 642 44.5
Hund05498 Selenicereus undatus HOM05D006061 ORTHO05D007450 1.5e-131 474.2 631 45.0
Nitab4.5_0006211g0030 Nicotiana tabacum HOM05D006061 ORTHO05D007450 2.2e-130 470.3 632 46.4
Nitab4.5_0002085g0150 Nicotiana tabacum HOM05D006061 ORTHO05D007450 4.9e-130 469.2 632 45.7
Migut.N02246 Erythranthe guttata HOM05D006061 ORTHO05D007450 6.4e-130 468.8 625 45.1
arahy.Tifrunner.gnm1.ann1.J8EIPB Arachis hypogaea HOM05D006061 ORTHO05D007450 8.4e-130 468.4 619 45.7
arahy.Tifrunner.gnm1.ann1.4WTK5H Arachis hypogaea HOM05D006061 ORTHO05D007450 1.9e-129 467.2 619 45.6
SalBow6G4925 Salvia bowleyana HOM05D006061 ORTHO05D007450 1.9e-129 467.2 628 44.9
PSO170G3920 Papaver somniferum HOM05D006061 ORTHO05D007450 4.2e-129 466.1 631 44.5
Haze_24749 Corylus avellana HOM05D006061 ORTHO05D007450 1.2e-128 464.5 691 44.9
Manes.12G040800 Manihot esculenta HOM05D006061 ORTHO05D007450 2.7e-128 463.4 480 55.8
Medtr7g099450 Medicago truncatula HOM05D006061 ORTHO05D007450 1.8e-124 450.7 618 45.1
Aqoxy5G00054 Aquilegia oxysepala HOM05D006061 ORTHO05D007450 2.4e-124 450.3 631 43.9
Peaxi162Scf00517g00313 Petunia axillaris HOM05D006061 ORTHO05D007450 1.2e-123 448.0 651 43.6
CAN.G771.51 Capsicum annuum HOM05D006061 ORTHO05D007450 3.4e-123 446.4 642 44.4
MBI07_g08916_MAGBIO Magnolia biondii HOM05D006061 ORTHO05D007450 2.9e-122 443.4 633 43.1
Ah.15g093400 Amaranthus hybridus HOM05D006061 ORTHO05D007450 6.4e-122 442.2 625 43.7
Lj1A80G16 Lonicera japonica HOM05D006061 ORTHO05D007450 4.2e-121 439.5 660 42.0
HanXRQChr13g0409031 Helianthus annuus HOM05D006061 ORTHO05D007450 6.7e-119 432.2 617 42.1
Rhsim13G0041800 Rhododendron simsii HOM05D006061 ORTHO05D000758 2.2e-114 417.2 717 38.5
FAN27G0211 Fragaria x ananassa HOM05D006061 ORTHO05D007450 1.9e-110 404.1 627 42.9
Lsat_1_v5_gn_8_90281 Lactuca sativa HOM05D006061 ORTHO05D007450 7.6e-107 392.1 623 40.3
ECA236G2978 Erigeron canadensis HOM05D006061 ORTHO05D000758 1.2e-104 384.8 614 40.7
ATR0787G120 Amborella trichopoda HOM05D006061 ORTHO05D007450 8.8e-95 352.1 662 37.9
vmacro02729 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 4.5e-91 339.7 396 51.0
Cc01_g08490 Coffea canephora HOM05D006061 ORTHO05D007450 1.4e-89 334.7 479 44.1
FAN15G2648 Fragaria x ananassa HOM05D006061 ORTHO05D007450 4.1e-84 316.6 395 48.1
AUR62025388 Chenopodium quinoa HOM05D006061 ORTHO05D007450 7.0e-84 315.8 406 47.5
Lalb_Chr01g0019421 Lupinus albus HOM05D006061 ORTHO05D007450 7.7e-83 312.4 365 50.1
CSS0041718 Camellia sinensis var. sinensis HOM05D006061 ORTHO05D007450 1.2e-78 298.5 330 51.2
Sed0025129 Sechium edule HOM05D006061 ORTHO05D007450 9.1e-76 288.9 319 53.9
Cpa.g.sc8.208 Carica papaya HOM05D006061 ORTHO05D007450 2.1e-72 277.7 294 51.7
VMungo1383G3365 Vigna mungo HOM05D006061 ORTHO05D007450 7.5e-70 269.2 321 49.8
Cpa.g.sc8.207 Carica papaya HOM05D006061 ORTHO05D007450 1.7e-69 268.1 279 54.1
MELO3C024149.2 Cucumis melo HOM05D006061 ORTHO05D007450 1.2e-59 235.3 279 50.9
Lalb_Chr01g0019411 Lupinus albus HOM05D006061 ORTHO05D007450 3.0e-50 204.1 226 52.7
SEGI_05721 Sequoiadendron giganteum HOM05D006061 ORTHO05D007450 2.5e-49 201.1 323 39.6
VMungo1383G3184 Vigna mungo HOM05D006061 ORTHO05D007450 1.3e-45 188.7 235 46.8
Pp3c7_21970 Physcomitrium patens HOM05D006061 ORTHO05D007450 2.9e-45 187.6 616 26.5
Oeu039640.1 Olea europaea HOM05D006061 ORTHO05D007450 4.9e-45 186.8 226 47.8
CARHR174390 Cardamine hirsuta HOM05D006061 ORTHO05D007450 1.0e-42 179.1 101 86.1
SMO356G0042 Selaginella moellendorffii HOM05D006061 ORTHO05D007450 2.0e-38 164.9 614 28.0
unitig_8.g4624 Utricularia gibba HOM05D006061 ORTHO05D007450 5.4e-36 156.8 273 39.6
DCAR_004700 Daucus carota HOM05D000065 ORTHO05D007450 1.2e-35 155.6 426 31.5
Zm00001eb133830 Zea mays HOM05D006061 ORTHO05D007450 1.2e-32 145.6 265 38.9
HPP92_014830 Vanilla planifolia HOM05D006061 ORTHO05D007450 6.4e-29 133.3 437 27.9
vmacro02728 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 2.4e-28 131.3 291 30.9
Gorai.008G101100 Gossypium raimondii HOM05D006061 ORTHO05D007450 8.1e-24 116.3 124 47.6
Os12g0228900 Oryza sativa ssp. japonica HOM05D006061 ORTHO05D007450 1.8e-23 115.2 203 36.9
Oeu039641.2 Olea europaea HOM05D006061 ORTHO05D007450 2.4e-23 114.8 160 36.9
Phvul.004G074200 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 2.4e-23 114.8 139 51.1
Gohir.D10G064900 Gossypium hirsutum HOM05D006061 ORTHO05D007450 4.0e-23 114.0 120 49.2
SHI26842 Sapria himalayana HOM05D006061 ORTHO05D007450 9.0e-23 112.8 140 50.7
Zm00001eb008990 Zea mays HOM05D006061 ORTHO05D007450 2.6e-22 111.3 139 47.5
Psat0ss8385g0040 Pisum sativum HOM05D006061 ORTHO05D007450 3.4e-22 110.9 113 41.6
Psat1g093320 Pisum sativum HOM05D006061 ORTHO05D007450 1.7e-21 108.6 114 41.2
CBR_g31999 Chara braunii HOM05D006061 ORTHO05D007450 3.2e-20 104.4 535 24.7
Cc00_g31740 Coffea canephora HOM05D006061 ORTHO05D007450 1.2e-19 102.4 152 42.8
Zm00001eb428270 Zea mays HOM05D006061 ORTHO05D007450 8.7e-18 96.3 138 44.9
Zm00001eb120120 Zea mays HOM05D006061 ORTHO05D007450 4.3e-17 94.0 125 46.4
SHI26843 Sapria himalayana HOM05D006061 ORTHO05D007450 5.6e-17 93.6 194 35.1
PSO675G3076 Papaver somniferum HOM05D006061 ORTHO05D007450 1.5e-14 85.5 334 29.0
Rhsim13G0055400 Rhododendron simsii HOM05D006061 ORTHO05D007450 9.3e-12 76.3 124 41.9
Zm00001eb399320 Zea mays HOM05D000103 ORTHO05D007450 6.2e-08 63.5 101 41.6
Zm00001eb068850 Zea mays HOM05D006061 ORTHO05D007450 6.9e-07 60.1 81 44.4


User provided reference genes

Program Settings