Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G19890 Arabidopsis thaliana HOM05D010965 ORTHO05D081396 5.7e-212 740.7 391 100.0
BraA04t16134Z Brassica rapa HOM05D010965 ORTHO05D024278 5.8e-15 86.3 221 29.4
BcaB02g08395 Brassica carinata HOM05D010965 ORTHO05D016023 3.8e-14 83.6 256 29.3
A04p04180 Brassica napus HOM05D010965 ORTHO05D024278 3.8e-14 83.6 223 29.6
BcaB02g08393 Brassica carinata HOM05D010965 ORTHO05D016023 2.4e-13 80.9 254 27.2
BcaC02g09794 Brassica carinata HOM05D010965 ORTHO05D024278 2.4e-13 80.9 217 29.5
A04p05130 Brassica napus HOM05D010965 ORTHO05D016023 4.2e-13 80.1 269 26.0
BcaC02g09041 Brassica carinata HOM05D010965 ORTHO05D016023 5.4e-13 79.7 269 26.0
BolC4t25347H Brassica oleracea HOM05D010965 ORTHO05D016023 5.4e-13 79.7 269 26.0
BraA04t16224Z Brassica rapa HOM05D010965 ORTHO05D016023 5.4e-13 79.7 269 26.0
BcaB02g08391 Brassica carinata HOM05D000018 ORTHO05D016023 1.6e-12 78.2 269 26.8
C04p37700 Brassica napus HOM05D010965 ORTHO05D016023 3.5e-12 77.0 256 27.7
BcaC02g09040 Brassica carinata HOM05D010965 ORTHO05D016023 4.6e-12 76.6 209 29.7
BolC2t06078H Brassica oleracea HOM05D004310 ORTHO05D009268 1.0e-11 75.5 186 31.7
C02p00800 Brassica napus HOM05D004310 ORTHO05D009268 1.3e-11 75.1 186 31.7
CARHR166880 Cardamine hirsuta HOM05D001456 ORTHO05D021385 1.3e-11 75.1 117 40.2
C04p36520 Brassica napus HOM05D010965 ORTHO05D024278 6.6e-11 72.8 187 31.0
BolC4t25144H Brassica oleracea HOM05D010965 ORTHO05D024278 6.6e-11 72.8 187 31.0
BcaC03g13029 Brassica carinata HOM05D004310 ORTHO05D009268 1.5e-10 71.6 157 33.8
CARHR159500 Cardamine hirsuta HOM05D001456 ORTHO05D021385 7.3e-10 69.3 143 35.7
Thhalv10027969m.g Eutrema salsugineum HOM05D001456 ORTHO05D011781 8.1e-09 65.9 72 50.0
BraA10t45076Z Brassica rapa HOM05D001260 ORTHO05D002424 1.4e-08 65.1 262 27.5
AL7G51710 Arabidopsis lyrata HOM05D001456 ORTHO05D012451 2.4e-08 64.3 106 41.5
AL1G52920 Arabidopsis lyrata HOM05D001456 ORTHO05D012451 9.0e-08 62.4 101 36.6
C01p42700 Brassica napus HOM05D001456 ORTHO05D015898 1.5e-07 61.6 65 50.8
AL7G21380 Arabidopsis lyrata HOM05D001456 ORTHO05D011865 2.0e-07 61.2 83 37.3
A09p52600 Brassica napus HOM05D016731 ORTHO05D011781 2.6e-07 60.8 81 44.4
BraA09t40690Z Brassica rapa HOM05D016731 ORTHO05D011781 2.6e-07 60.8 81 44.4
CARHR167770 Cardamine hirsuta HOM05D001456 ORTHO05D011781 3.4e-07 60.5 83 43.4
Thhalv10006264m.g Eutrema salsugineum HOM05D001456 ORTHO05D011781 7.6e-07 59.3 52 53.8
QL03p010255 Quercus lobata HOM05D001456 ORTHO05D002799 1.3e-06 58.5 155 32.3
QL03p010491 Quercus lobata HOM05D001456 ORTHO05D002799 1.3e-06 58.5 155 32.3
BcaB04g20527 Brassica carinata HOM05D011241 ORTHO05D016779 2.2e-06 57.8 189 28.6
A09p52590 Brassica napus HOM05D001456 ORTHO05D011781 4.9e-06 56.6 72 41.7
C08p35340 Brassica napus HOM05D001456 ORTHO05D011781 4.9e-06 56.6 72 41.7
BolC8t51127H Brassica oleracea HOM05D001456 ORTHO05D011781 4.9e-06 56.6 72 41.7
BcaC09g49085 Brassica carinata HOM05D001456 ORTHO05D015898 6.4e-06 56.2 65 49.2
BolC1t04225H Brassica oleracea HOM05D001456 ORTHO05D015898 6.4e-06 56.2 65 49.2
BraA09t40691Z Brassica rapa HOM05D001456 ORTHO05D011781 6.4e-06 56.2 70 42.9
Carub.0007s1746 Capsella rubella HOM05D001456 ORTHO05D011865 6.4e-06 56.2 54 48.1
A09p52620 Brassica napus HOM05D001456 ORTHO05D011781 8.4e-06 55.8 70 42.9
Thhalv10003587m.g Eutrema salsugineum HOM05D001456 ORTHO05D002799 8.4e-06 55.8 113 40.7


User provided reference genes

Program Settings