Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G19880 Arabidopsis thaliana HOM05D003954 ORTHO05D004627 6.0e-310 1066.6 521 100.0
AL3G48340 Arabidopsis lyrata HOM05D003954 ORTHO05D004627 6.2e-307 1056.6 521 98.8
Sp3g33220 Schrenkiella parvula HOM05D003954 ORTHO05D004627 2.4e-303 1044.6 521 97.1
Carub.0003s3415 Capsella rubella HOM05D003954 ORTHO05D004627 7.9e-302 1039.6 521 97.1
Thhalv10001962m.g Eutrema salsugineum HOM05D003954 ORTHO05D004627 1.9e-300 1035.0 521 96.5
CARHR110320 Cardamine hirsuta HOM05D003954 ORTHO05D004627 5.3e-298 1026.9 521 95.4
BcaB08g34891 Brassica carinata HOM05D003954 ORTHO05D004627 3.9e-293 1010.7 521 92.7
C08p42370 Brassica napus HOM05D003954 ORTHO05D004627 5.1e-293 1010.4 521 92.9
BolC8t51799H Brassica oleracea HOM05D003954 ORTHO05D004627 5.1e-293 1010.4 521 92.9
A09p59090 Brassica napus HOM05D003954 ORTHO05D004627 1.1e-292 1009.2 521 92.7
Aa31LG8G16830 Aethionema arabicum HOM05D003954 ORTHO05D004627 1.9e-292 1008.4 521 93.5
BraA09t41292Z Brassica rapa HOM05D003954 ORTHO05D004627 5.6e-292 1006.9 521 92.3
BcaC07g41232 Brassica carinata HOM05D003954 ORTHO05D004627 2.1e-291 1005.0 521 92.3
BcaC04g22815 Brassica carinata HOM05D003954 ORTHO05D004627 4.0e-290 1000.7 521 92.7
C09p15000 Brassica napus HOM05D003954 ORTHO05D004627 4.0e-290 1000.7 521 92.7
BcaB03g16776 Brassica carinata HOM05D003954 ORTHO05D004627 1.0e-288 996.1 520 91.5
BcaC06g36652 Brassica carinata HOM05D003954 ORTHO05D004627 2.2e-288 995.0 520 91.7
BolC7t40584H Brassica oleracea HOM05D003954 ORTHO05D004627 2.2e-288 995.0 520 91.7
BolC9t54402H Brassica oleracea HOM05D003954 ORTHO05D004627 2.9e-288 994.6 522 92.3
BraA09t36909Z Brassica rapa HOM05D003954 ORTHO05D004627 2.1e-286 988.4 525 91.8
BraA07t27878Z Brassica rapa HOM05D003954 ORTHO05D004627 3.5e-286 987.6 520 90.8
A07p00800 Brassica napus HOM05D003954 ORTHO05D004627 4.6e-286 987.3 520 90.8
THA.LOC104814571 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 4.2e-279 964.1 521 88.5
THA.LOC104804008 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 8.5e-272 939.9 521 86.0
Cpa.g.sc40.95 Carica papaya HOM05D003954 ORTHO05D004627 2.4e-266 921.8 521 83.7
Ciclev10008006m.g Citrus clementina HOM05D003954 ORTHO05D004627 3.2e-263 911.4 521 83.5
Thecc.09G100700 Theobroma cacao HOM05D003954 ORTHO05D004627 9.4e-263 909.8 521 82.3
TWI34G0439 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 3.6e-262 907.9 521 82.7
Cfa003181 Carpinus fangiana HOM05D003954 ORTHO05D004627 5.7e-260 900.6 521 82.1
Duzib168G1367 Durio zibethinus HOM05D003954 ORTHO05D004627 1.7e-259 899.0 521 81.8
RcHm_v2.0_Chr2g0091861 Rosa chinensis HOM05D003954 ORTHO05D004627 2.2e-259 898.7 518 82.8
Lj4g0018527 Lotus japonicus HOM05D003954 ORTHO05D004627 4.8e-259 897.5 517 82.6
Manes.16G108600 Manihot esculenta HOM05D003954 ORTHO05D004627 1.1e-258 896.3 519 81.7
CiPaw.04G158000 Carya illinoinensis HOM05D003954 ORTHO05D004627 1.8e-258 895.6 521 81.2
Manes.03G027300 Manihot esculenta HOM05D003954 ORTHO05D004627 7.0e-258 893.6 519 81.5
GSVIVG01015303001 Vitis vinifera HOM05D003954 ORTHO05D004627 7.7e-257 890.2 519 81.3
MD02G1065600 Malus domestica HOM05D003954 ORTHO05D004627 1.0e-256 889.8 521 82.1
FAN28G0221 Fragaria x ananassa HOM05D003954 ORTHO05D004627 1.7e-256 889.0 529 80.5
Gohir.A06G067200 Gossypium hirsutum HOM05D003954 ORTHO05D004627 1.7e-256 889.0 520 81.2
CiPaw.03G225300 Carya illinoinensis HOM05D003954 ORTHO05D004627 2.9e-256 888.3 521 79.8
Gohir.D06G065800 Gossypium hirsutum HOM05D003954 ORTHO05D004627 2.9e-256 888.3 520 80.8
Actinidia09446 Actinidia chinensis HOM05D003954 ORTHO05D004627 6.5e-256 887.1 521 80.4
Glyma.08G033600 Glycine max HOM05D003954 ORTHO05D004627 6.5e-256 887.1 519 81.1
FAN19G1313 Fragaria x ananassa HOM05D003954 ORTHO05D004627 8.5e-256 886.7 529 80.5
FAN26G2983 Fragaria x ananassa HOM05D003954 ORTHO05D004627 8.5e-256 886.7 529 80.7
Eucgr.C03729 Eucalyptus grandis HOM05D003954 ORTHO05D004627 1.1e-255 886.3 521 80.6
FAN26G2948 Fragaria x ananassa HOM05D003954 ORTHO05D004627 4.2e-255 884.4 529 80.5
Phvul.002G308700 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 5.5e-255 884.0 519 81.1
MD15G1196500 Malus domestica HOM05D003954 ORTHO05D004627 1.6e-254 882.5 522 81.4
VMungo0251G2014 Vigna mungo HOM05D003954 ORTHO05D004627 4.7e-254 880.9 519 80.7
Ca_17364_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 6.1e-254 880.6 517 81.4
CANSAT56G2004 Cannabis sativa HOM05D003954 ORTHO05D004627 8.0e-254 880.2 545 77.6
Potri.018G087700 Populus trichocarpa HOM05D003954 ORTHO05D004627 8.0e-254 880.2 517 81.2
Sabra18G0076000 Salix brachista HOM05D003954 ORTHO05D004627 1.8e-253 879.0 514 81.3
Glyma.05G226800 Glycine max HOM05D003954 ORTHO05D004627 3.0e-253 878.2 521 79.8
QL02p041611 Quercus lobata HOM05D003954 ORTHO05D004627 1.2e-252 876.3 520 80.0
CSS0001350 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 2.6e-252 875.2 521 79.7
Medtr8g102500 Medicago truncatula HOM05D003954 ORTHO05D004627 2.6e-252 875.2 519 80.0
Gohir.A05G025900 Gossypium hirsutum HOM05D003954 ORTHO05D004627 3.3e-252 874.8 521 79.8
Gorai.009G027500 Gossypium raimondii HOM05D003954 ORTHO05D004627 3.3e-252 874.8 521 79.8
Actinidia39784 Actinidia chinensis HOM05D003954 ORTHO05D004627 4.4e-252 874.4 521 79.8
Gorai.010G077100 Gossypium raimondii HOM05D003954 ORTHO05D004627 7.5e-252 873.6 545 76.9
Hund09103 Selenicereus undatus HOM05D003954 ORTHO05D004627 3.7e-251 871.3 521 78.9
EL10Ac8g18378 Beta vulgaris HOM05D003954 ORTHO05D004627 9.1e-250 866.7 521 78.5
Potri.006G164864 Populus trichocarpa HOM05D003954 ORTHO05D004627 1.2e-249 866.3 511 81.2
SGA_v2.0_scaffold62G21557 Striga asiatica HOM05D003954 ORTHO05D004627 2.7e-249 865.1 521 78.9
Gohir.D05G027400 Gossypium hirsutum HOM05D003954 ORTHO05D004627 5.9e-249 864.0 531 78.2
Hma1.2p1_0571F.1_g180650 Hydrangea macrophylla HOM05D003954 ORTHO05D004627 5.0e-248 860.9 521 79.1
CsaV3_1G039780 Cucumis sativus L. HOM05D003954 ORTHO05D004627 1.9e-247 859.0 522 77.8
Sed0027745 Sechium edule HOM05D003954 ORTHO05D004627 7.2e-247 857.1 522 77.8
Nitab4.5_0005668g0030 Nicotiana tabacum HOM05D003954 ORTHO05D004627 1.6e-246 855.9 521 79.1
Lalb_Chr05g0223231 Lupinus albus HOM05D003954 ORTHO05D004627 4.7e-246 854.4 522 77.4
Oeu064178.1 Olea europaea HOM05D003954 ORTHO05D004627 8.0e-246 853.6 521 77.7
Peaxi162Scf00665g00340 Petunia axillaris HOM05D003954 ORTHO05D004627 5.2e-245 850.9 521 78.3
Lalb_Chr09g0331531 Lupinus albus HOM05D003954 ORTHO05D004627 8.8e-245 850.1 522 77.6
Sc08g0008010 Simmondsia chinensis HOM05D003954 ORTHO05D004627 8.8e-245 850.1 521 76.8
TAR624G0841 Trochodendron aralioides HOM05D003954 ORTHO05D004627 2.6e-244 848.6 519 77.3
Actinidia07454 Actinidia chinensis HOM05D003954 ORTHO05D004627 5.7e-244 847.4 555 75.0
Cc06_g10470 Coffea canephora HOM05D003954 ORTHO05D004627 7.5e-244 847.0 518 78.6
Migut.K00540 Erythranthe guttata HOM05D003954 ORTHO05D004627 7.5e-244 847.0 521 77.0
vmacro06252 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 1.3e-243 846.3 521 77.2
CAN.G1241.30 Capsicum annuum HOM05D003954 ORTHO05D004627 1.7e-243 845.9 522 78.4
Migut.J01101 Erythranthe guttata HOM05D003954 ORTHO05D004627 1.7e-243 845.9 521 78.1
MBI01_g10128_MAGBIO Magnolia biondii HOM05D003954 ORTHO05D004627 8.3e-243 843.6 527 76.3
Nitab4.5_0000566g0060 Nicotiana tabacum HOM05D003954 ORTHO05D004627 8.3e-243 843.6 519 78.0
Duzib187G1161 Durio zibethinus HOM05D003954 ORTHO05D004627 1.4e-242 842.8 521 77.7
PGSC0003DMG400000296 Solanum tuberosum HOM05D003954 ORTHO05D004627 1.4e-242 842.8 521 77.5
arahy.Tifrunner.gnm1.ann1.UV3YSF Arachis hypogaea HOM05D003954 ORTHO05D004627 3.1e-242 841.6 517 77.8
Aqoxy7G01403 Aquilegia oxysepala HOM05D003954 ORTHO05D004627 5.4e-242 840.9 515 77.1
Sopen12g003440 Solanum pennellii HOM05D003954 ORTHO05D004627 9.1e-242 840.1 521 77.4
Solyc12g008490.2 Solanum lycopersicum HOM05D003954 ORTHO05D004627 1.2e-241 839.7 521 77.4
PSO210G6242 Papaver somniferum HOM05D003954 ORTHO05D004627 1.0e-240 836.6 523 76.3
MSTRG.19554 Avicennia marina HOM05D003954 ORTHO05D004627 2.3e-240 835.5 518 77.6
Psat1g047360 Pisum sativum HOM05D003954 ORTHO05D004627 2.3e-240 835.5 520 75.6
Atru.chr7.1463 Acer truncatum HOM05D003954 ORTHO05D004627 6.6e-240 833.9 467 85.0
Psat7g016920 Pisum sativum HOM05D003954 ORTHO05D004627 6.6e-240 833.9 493 80.3
FAN23G0884 Fragaria x ananassa HOM05D003954 ORTHO05D004627 1.5e-239 832.8 521 77.2
PSO210G3120 Papaver somniferum HOM05D003954 ORTHO05D004627 1.9e-239 832.4 523 76.3
TWI32G1148 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 4.7e-238 827.8 521 77.0
ECA240G1631 Erigeron canadensis HOM05D003954 ORTHO05D004627 1.5e-236 822.8 518 75.3
Lalb_Chr24g0397311 Lupinus albus HOM05D003954 ORTHO05D004627 2.0e-236 822.4 525 75.2
PGR102G1739 Punica granatum HOM05D003954 ORTHO05D004627 7.5e-236 820.5 521 76.2
HanXRQChr11g0321631 Helianthus annuus HOM05D003954 ORTHO05D004627 1.7e-235 819.3 521 75.6
Prupe.7G219900 Prunus persica HOM05D003954 ORTHO05D004627 7.0e-234 813.9 465 83.4
Glyma.01G007900 Glycine max HOM05D003954 ORTHO05D004627 7.8e-233 810.4 520 74.2
Medtr6g088695 Medicago truncatula HOM05D003954 ORTHO05D004627 1.3e-232 809.7 520 73.7
HanXRQChr09g0238881 Helianthus annuus HOM05D003954 ORTHO05D004627 2.3e-232 808.9 521 74.5
Lj2g0001823 Lotus japonicus HOM05D003954 ORTHO05D004627 2.3e-232 808.9 521 74.7
Glyma.16G078400 Glycine max HOM05D003954 ORTHO05D004627 3.8e-232 808.1 522 73.8
SGA_v2.0_scaffold19G08753 Striga asiatica HOM05D003954 ORTHO05D004627 1.1e-231 806.6 535 73.6
Rhsim05G0040200 Rhododendron simsii HOM05D003954 ORTHO05D004627 3.3e-231 805.1 519 75.7
Sc18g0001490 Simmondsia chinensis HOM05D003954 ORTHO05D004627 3.3e-231 805.1 473 80.3
Dinv36687 Davidia involucrata HOM05D003954 ORTHO05D004627 4.3e-231 804.7 467 82.4
Phvul.004G176200 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 6.1e-230 800.8 520 73.3
arahy.Tifrunner.gnm1.ann1.LVXR97 Arachis hypogaea HOM05D003954 ORTHO05D004627 2.3e-229 798.9 491 77.8
Sed0021958 Sechium edule HOM05D003954 ORTHO05D004627 8.9e-229 797.0 468 79.9
PSO063G1218 Papaver somniferum HOM05D003954 ORTHO05D004627 2.0e-228 795.8 517 74.5
SalBow6G3745 Salvia bowleyana HOM05D003954 ORTHO05D004627 2.6e-228 795.4 516 74.2
MELO3C015411.2 Cucumis melo HOM05D003954 ORTHO05D004627 4.4e-228 794.7 477 78.0
PSO832G3271 Papaver somniferum HOM05D003954 ORTHO05D004627 5.8e-228 794.3 517 74.3
Lalb_Chr22g0352551 Lupinus albus HOM05D003954 ORTHO05D004627 4.9e-227 791.2 554 70.4
Rhsim03G0236700 Rhododendron simsii HOM05D003954 ORTHO05D004627 2.4e-226 788.9 521 73.9
unitig_578.g15920 Utricularia gibba HOM05D003954 ORTHO05D004627 4.1e-226 788.1 550 70.5
COL.COLO4_34744 Corchorus olitorius HOM05D003954 ORTHO05D004627 3.0e-224 781.9 562 71.2
HPP92_001552 Vanilla planifolia HOM05D003954 ORTHO05D004627 5.0e-224 781.2 517 72.3
Nn8g39063 Nelumbo nucifera HOM05D003954 ORTHO05D004627 2.5e-223 778.9 470 78.9
ATR0681G291 Amborella trichopoda HOM05D003954 ORTHO05D004627 6.8e-221 770.8 520 71.5
TAR633G1204 Trochodendron aralioides HOM05D003954 ORTHO05D004627 6.8e-221 770.8 471 77.3
AUR62021404 Chenopodium quinoa HOM05D003954 ORTHO05D004627 8.9e-221 770.4 521 71.2
AUR62010893 Chenopodium quinoa HOM05D003954 ORTHO05D004627 9.8e-220 766.9 521 70.8
vmacro10852 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 9.8e-220 766.9 574 67.1
arahy.Tifrunner.gnm1.ann1.KIU7DS Arachis hypogaea HOM05D003954 ORTHO05D004627 5.4e-218 761.1 521 70.6
CDE04G2595 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 7.8e-217 757.3 519 70.3
arahy.Tifrunner.gnm1.ann1.1X3G68 Arachis hypogaea HOM05D003954 ORTHO05D004627 1.0e-216 756.9 521 70.2
CSS0033107 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 6.6e-216 754.2 521 71.6
Lsat_1_v5_gn_7_39841 Lactuca sativa HOM05D003954 ORTHO05D004627 2.0e-212 742.7 521 69.9
CDE07G1077 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 3.7e-211 738.4 521 69.3
TPR.G21381 Trifolium pratense HOM05D003954 ORTHO05D004627 3.3e-207 725.3 541 66.2
VMungo0464G1304 Vigna mungo HOM05D003954 ORTHO05D004627 3.5e-201 705.3 520 66.9
Ah.14g083230 Amaranthus hybridus HOM05D003954 ORTHO05D004627 7.3e-199 697.6 521 65.6
Lj7A665G29 Lonicera japonica HOM05D003954 ORTHO05D004627 7.6e-196 687.6 504 70.4
FvH4_1g06110 Fragaria vesca HOM05D003954 ORTHO05D004627 2.8e-190 669.1 383 82.2
TPR.G23479 Trifolium pratense HOM05D003954 ORTHO05D004627 4.9e-187 658.3 383 82.0
Dinv41667 Davidia involucrata HOM05D003954 ORTHO05D004627 2.3e-184 649.4 381 80.3
SHI02691 Sapria himalayana HOM05D003954 ORTHO05D004627 2.5e-183 646.0 562 59.6
Lsat_1_v5_gn_5_144920 Lactuca sativa HOM05D003954 ORTHO05D004627 5.6e-183 644.8 501 63.7
Medtr8g102490 Medicago truncatula HOM05D003954 ORTHO05D004627 3.4e-180 635.6 481 66.7
AagrBONN_evm.TU.Sc2ySwM_228.2751 Anthoceros agrestis HOM05D003954 ORTHO05D004627 2.4e-173 612.8 487 60.8
SMO367G0175 Selaginella moellendorffii HOM05D003954 ORTHO05D004627 1.3e-168 597.0 447 63.5
A09p12640 Brassica napus HOM05D003954 ORTHO05D004627 4.2e-162 575.5 293 93.2
Pp3c16_7990 Physcomitrium patens HOM05D003954 ORTHO05D004627 1.0e-155 554.3 473 57.3
Mapoly0082s0037 Marchantia polymorpha HOM05D003954 ORTHO05D004627 7.9e-153 544.7 501 54.9
DCAR_028664 Daucus carota HOM05D003954 ORTHO05D004627 2.2e-142 510.0 353 70.5
Zm00001eb365210 Zea mays HOM05D003954 ORTHO05D004627 2.4e-133 479.9 286 79.0
Ca_25572_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 6.1e-129 465.3 292 76.4
CAN.G3537.1 Capsicum annuum HOM05D003954 ORTHO05D004627 7.5e-127 458.4 290 76.9
TAR626G0478 Trochodendron aralioides HOM05D003954 ORTHO05D004627 3.1e-125 453.0 266 77.4
Lj4C389T2 Lonicera japonica HOM05D003954 ORTHO05D004627 1.3e-123 447.6 289 75.1
SEGI_27682 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 2.3e-107 393.7 246 75.6
ClCG03G016150 Citrullus lanatus HOM05D003954 ORTHO05D004627 1.1e-101 374.8 245 75.1
Actinidia17525 Actinidia chinensis HOM05D003954 ORTHO05D004627 3.4e-79 300.1 204 71.1
MCO02G294 Micromonas commoda HOM05D003954 ORTHO05D004627 1.4e-56 224.9 412 34.2
TPR.G23455 Trifolium pratense HOM05D003954 ORTHO05D004627 2.4e-56 224.2 132 78.8
PRCOL_00001038 Prasinoderma coloniale HOM05D003954 ORTHO05D004627 5.0e-54 216.5 472 31.1
SEGI_30237 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 1.2e-39 168.7 152 52.0
Actinidia32652 Actinidia chinensis HOM05D003954 ORTHO05D004627 2.0e-39 167.9 204 48.5
Oeu053184.3 Olea europaea HOM05D000113 ORTHO05D010194 8.8e-35 152.5 109 67.0
Os01g0906000 Oryza sativa ssp. japonica HOM05D003954 ORTHO05D004627 8.0e-28 129.4 86 73.3
Zm00001eb132850 Zea mays HOM05D003954 ORTHO05D004627 4.2e-21 107.1 58 82.8
Actinidia34604 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.2e-20 105.5 143 47.6
MD01G1180200 Malus domestica HOM05D003954 ORTHO05D004627 4.0e-19 100.5 60 76.7
Cre09.g409250 Chlamydomonas reinhardtii HOM05D003954 ORTHO05D004627 2.6e-18 97.8 156 35.9
Actinidia32651 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.0e-11 75.9 173 34.7
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 7.7e-07 59.7 37 75.7
TPR.G21382 Trifolium pratense HOM05D003954 ORTHO05D004627 7.7e-07 59.7 55 56.4
CAN.G195.50 Capsicum annuum HOM05D003954 ORTHO05D004627 1.7e-06 58.5 47 59.6


User provided reference genes

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