Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G19280 Arabidopsis thaliana HOM05D008657 ORTHO05D010869 1.0e-195 687.6 403 100.0
AL3G49010 Arabidopsis lyrata HOM05D008657 ORTHO05D010869 1.2e-151 541.2 408 82.6
CARHR109740 Cardamine hirsuta HOM05D008657 ORTHO05D010869 2.1e-148 530.4 408 82.6
Sp3g32660 Schrenkiella parvula HOM05D008657 ORTHO05D010869 5.3e-144 515.8 411 78.6
Carub.0003s3351 Capsella rubella HOM05D008657 ORTHO05D010869 8.4e-142 508.4 361 85.3
BcaB03g16718 Brassica carinata HOM05D008657 ORTHO05D010869 2.0e-135 487.3 409 61.4
BcaC06g36560 Brassica carinata HOM05D008657 ORTHO05D010869 2.1e-129 467.2 411 67.6
C07p02910 Brassica napus HOM05D008657 ORTHO05D010869 6.2e-129 465.7 411 67.6
BolC7t40688H Brassica oleracea HOM05D008657 ORTHO05D010869 1.4e-128 464.5 411 67.4
BraA07t27942Z Brassica rapa HOM05D008657 ORTHO05D010869 2.6e-127 460.3 414 68.4
A07p01450 Brassica napus HOM05D008657 ORTHO05D010869 2.5e-125 453.8 413 67.6
Aa31LG8G16330 Aethionema arabicum HOM05D008657 ORTHO05D010869 3.8e-118 429.9 401 71.1
Thhalv10023028m.g Eutrema salsugineum HOM05D008657 ORTHO05D010869 8.2e-113 412.1 309 68.3
Dinv02560 Davidia involucrata HOM05D008657 ORTHO05D010869 3.2e-64 250.8 323 51.7
CSS0003153 Camellia sinensis var. sinensis HOM05D000399 ORTHO05D000304 1.1e-61 242.3 323 50.5
RcHm_v2.0_Chr1g0330001 Rosa chinensis HOM05D008657 ORTHO05D010869 2.1e-55 221.5 321 51.7
Cpa.g.sc33.145 Carica papaya HOM05D008657 ORTHO05D010869 2.7e-55 221.1 368 48.6
Actinidia03250 Actinidia chinensis HOM05D008657 ORTHO05D010869 3.9e-54 217.2 345 49.6
COL.COLO4_28899 Corchorus olitorius HOM05D008657 ORTHO05D010869 1.1e-51 209.1 318 51.9
TAR376G1027 Trochodendron aralioides HOM05D008657 ORTHO05D010869 1.0e-46 192.6 419 43.7
Hund22231 Selenicereus undatus HOM05D008657 ORTHO05D010869 3.0e-46 191.0 330 49.4
Prupe.2G051600 Prunus persica HOM05D008657 ORTHO05D010869 6.6e-46 189.9 323 49.5
ClCG07G005030 Citrullus lanatus HOM05D008657 ORTHO05D010869 8.6e-46 189.5 391 36.8
Lj3C333T3 Lonicera japonica HOM05D008657 ORTHO05D010869 4.3e-45 187.2 321 48.0
Sc08g0000170 Simmondsia chinensis HOM05D008657 ORTHO05D010869 3.6e-44 184.1 325 37.8
Sed0024339 Sechium edule HOM05D008657 ORTHO05D010869 2.4e-43 181.4 401 30.9
CsaV3_5G029290 Cucumis sativus L. HOM05D008657 ORTHO05D010869 1.5e-42 178.7 345 40.0
CANSAT56G3352 Cannabis sativa HOM05D008657 ORTHO05D010869 2.6e-42 177.9 322 46.9
FAN10G0285 Fragaria x ananassa HOM05D008657 ORTHO05D010869 2.3e-38 164.9 400 40.8
MELO3C011779.2 Cucumis melo HOM05D008657 ORTHO05D010869 8.7e-38 162.9 396 33.8
PGR031G0953 Punica granatum HOM05D008657 ORTHO05D010869 2.6e-34 151.4 297 45.5
Gorai.010G208900 Gossypium raimondii HOM05D008657 ORTHO05D010869 8.4e-33 146.4 318 43.1
Gohir.A06G171100 Gossypium hirsutum HOM05D008657 ORTHO05D010869 1.9e-32 145.2 318 43.1
Thecc.10G128900 Theobroma cacao HOM05D008657 ORTHO05D010869 2.3e-30 138.3 318 43.4
FAN06G4111 Fragaria x ananassa HOM05D008657 ORTHO05D010869 6.6e-30 136.7 236 36.9
FvH4_7g04580 Fragaria vesca HOM05D008657 ORTHO05D010869 1.5e-29 135.6 236 36.9
FAN03G0499 Fragaria x ananassa HOM05D008657 ORTHO05D010869 8.4e-25 119.8 221 35.7
DCAR_018350 Daucus carota HOM05D008657 ORTHO05D010869 2.1e-23 115.2 143 37.1
Oeu052822.1 Olea europaea HOM05D008657 ORTHO05D010869 1.8e-22 112.1 238 50.8
Lj3A303T33 Lonicera japonica HOM05D008657 ORTHO05D010869 1.5e-21 109.0 227 34.4
FAN01G0963 Fragaria x ananassa HOM05D008657 ORTHO05D010869 1.8e-19 102.1 115 48.7
Eucgr.G03180 Eucalyptus grandis HOM05D008657 ORTHO05D010869 1.1e-16 92.8 112 40.2
HPP92_001923 Vanilla planifolia HOM05D007455 ORTHO05D009431 3.4e-10 71.2 165 29.1
SalBow4G0419 Salvia bowleyana HOM05D007455 ORTHO05D009431 2.9e-09 68.2 165 28.5
ATR0618G019 Amborella trichopoda HOM05D006888 ORTHO05D008371 4.9e-09 67.4 217 22.6
Oeu039576.1 Olea europaea HOM05D007455 ORTHO05D009431 6.5e-09 67.0 165 28.5
HPP92_001299 Vanilla planifolia HOM05D007291 ORTHO05D009038 5.5e-08 63.9 218 28.0
ClCG01G008820 Citrullus lanatus HOM05D007291 ORTHO05D009038 1.3e-06 59.3 195 26.2
Dinv28147 Davidia involucrata HOM05D007496 ORTHO05D009479 1.3e-06 59.3 209 26.8
Eucgr.C02447 Eucalyptus grandis HOM05D007455 ORTHO05D009431 3.9e-06 57.8 149 28.9
MSTRG.12443 Avicennia marina HOM05D007455 ORTHO05D009431 5.1e-06 57.4 203 26.6
CsaV3_5G024140 Cucumis sativus L. HOM05D007291 ORTHO05D009038 5.1e-06 57.4 197 25.4
SEGI_12665 Sequoiadendron giganteum HOM05D007455 ORTHO05D009431 5.1e-06 57.4 135 28.9
Rhsim13G0211000 Rhododendron simsii HOM05D007455 ORTHO05D009431 6.7e-06 57.0 171 28.7


User provided reference genes

Program Settings