Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G19045 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 6.5e-37 156.8 73 100.0
AT2G19030 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 7.2e-36 153.3 73 97.3
AL3G52890 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 4.7e-35 150.6 73 95.9
AT2G19040 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 6.8e-34 146.7 73 94.5
AL3G52880 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 6.5e-29 130.2 70 87.1
Carub.0003s3341 Capsella rubella HOM05D008462 ORTHO05D010511 8.0e-27 123.2 73 76.7
Carub.0003s3328 Capsella rubella HOM05D008462 ORTHO05D010511 1.0e-26 122.9 73 76.7
AT2G19020 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 2.2e-24 115.2 74 77.0
Sp3g32450 Schrenkiella parvula HOM05D008462 ORTHO05D010511 3.3e-20 101.3 73 61.6
Thhalv10023138m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 1.4e-18 95.9 73 61.6
BcaB03g16703 Brassica carinata HOM05D000065 ORTHO05D000162 8.9e-18 93.2 58 67.2
CARHR109540 Cardamine hirsuta HOM05D008462 ORTHO05D010511 1.7e-16 89.0 73 58.9
AT3G25170 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 2.4e-15 85.1 75 54.7
AL3G40860 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 1.6e-14 82.4 75 53.3
Sp3g22770 Schrenkiella parvula HOM05D008462 ORTHO05D010511 1.6e-14 82.4 74 54.1
BcaB07g31637 Brassica carinata HOM05D008462 ORTHO05D010511 2.0e-14 82.0 71 56.3
BcaC04g22878 Brassica carinata HOM05D008462 ORTHO05D010511 5.9e-14 80.5 72 54.2
C09p14320 Brassica napus HOM05D008462 ORTHO05D010511 5.9e-14 80.5 72 54.2
BolC9t54335H Brassica oleracea HOM05D008462 ORTHO05D010511 5.9e-14 80.5 72 54.2
Thhalv10002753m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 5.9e-14 80.5 74 51.4
Thhalv10026849m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 1.3e-13 79.3 73 52.1
Aa31sc95G170 Aethionema arabicum HOM05D008462 ORTHO05D010511 2.3e-13 78.6 76 50.0
CARHR105300 Cardamine hirsuta HOM05D008462 ORTHO05D010511 3.9e-13 77.8 59 61.0
A07p07140 Brassica napus HOM05D008462 ORTHO05D010511 1.5e-12 75.9 73 56.2
BraA07t28500Z Brassica rapa HOM05D008462 ORTHO05D010511 1.5e-12 75.9 73 56.2
CARHR101500 Cardamine hirsuta HOM05D008462 ORTHO05D010511 5.6e-12 73.9 73 49.3
BcaC06g35797 Brassica carinata HOM05D008462 ORTHO05D010511 1.6e-11 72.4 73 53.4
C07p10750 Brassica napus HOM05D008462 ORTHO05D010511 1.6e-11 72.4 73 53.4
BolC7t41541H Brassica oleracea HOM05D008462 ORTHO05D010511 1.6e-11 72.4 73 53.4
AL9U11140 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 2.3e-10 68.6 74 45.9
Eucgr.L02596 Eucalyptus grandis HOM05D008462 ORTHO05D010511 6.8e-10 67.0 73 46.6
AT4G13075 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 8.9e-10 66.6 74 45.9
CARHR101510 Cardamine hirsuta HOM05D008462 ORTHO05D010511 2.0e-09 65.5 76 46.1
BcaB04g21014 Brassica carinata HOM05D023045 ORTHO05D024329 2.6e-09 65.1 66 42.4
AL3G40850 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 4.4e-09 64.3 75 49.3
BcaC06g30603 Brassica carinata HOM05D008462 ORTHO05D010511 4.4e-09 64.3 70 50.0
THA.LOC109116491 Tarenaya hassleriana HOM05D008462 ORTHO05D010511 5.8e-09 63.9 48 52.1
BcaNung02684 Brassica carinata HOM05D008462 ORTHO05D010511 7.5e-09 63.5 70 51.4
C07p50070 Brassica napus HOM05D008462 ORTHO05D010511 7.5e-09 63.5 70 51.4
BolC7t45511H Brassica oleracea HOM05D008462 ORTHO05D010511 7.5e-09 63.5 70 51.4
Carub.0003s2550 Capsella rubella HOM05D008462 ORTHO05D010511 9.8e-09 63.2 76 46.1
BraA03t14245Z Brassica rapa HOM05D008462 ORTHO05D010511 2.2e-08 62.0 70 50.0
BcaB06g28566 Brassica carinata HOM05D008462 ORTHO05D010511 2.9e-08 61.6 70 48.6
BcaC06g30601 Brassica carinata HOM05D008462 ORTHO05D010511 3.7e-08 61.2 71 49.3
Eucgr.E01763 Eucalyptus grandis HOM05D008462 ORTHO05D010511 1.4e-07 59.3 70 41.4
AT3G25165 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 2.4e-07 58.5 72 47.2
Sed0003068 Sechium edule HOM05D010794 ORTHO05D013590 2.4e-07 58.5 72 43.1
Eucgr.L02598 Eucalyptus grandis HOM05D009215 ORTHO05D010511 3.2e-07 58.2 70 41.4
C07p01380 Brassica napus HOM05D008462 ORTHO05D010511 4.1e-07 57.8 77 46.8
CsaV3_UNG233300 Cucumis sativus L. HOM05D010794 ORTHO05D013590 4.1e-07 57.8 74 41.9
Gohir.A03G013100 Gossypium hirsutum HOM05D009215 ORTHO05D010851 4.1e-07 57.8 74 41.9
C05p61600 Brassica napus HOM05D008462 ORTHO05D010511 7.0e-07 57.0 77 46.8
Nn1g08163 Nelumbo nucifera HOM05D057550 ORTHO05D010511 2.0e-06 55.5 71 43.7
A01p40150 Brassica napus HOM05D023045 ORTHO05D024329 4.6e-06 54.3 75 38.7
BraA01t04055Z Brassica rapa HOM05D023045 ORTHO05D024329 4.6e-06 54.3 75 38.7


User provided reference genes

Program Settings