Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G19040 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 6.5e-37 156.8 73 100.0
AL3G52890 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 1.4e-34 149.1 73 95.9
AT2G19030 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 1.8e-34 148.7 73 94.5
AT2G19045 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 3.0e-34 147.9 73 94.5
AL3G52880 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 1.6e-27 125.6 70 84.3
Carub.0003s3328 Capsella rubella HOM05D008462 ORTHO05D010511 2.7e-27 124.8 73 79.5
Carub.0003s3341 Capsella rubella HOM05D008462 ORTHO05D010511 2.3e-26 121.7 73 76.7
AT2G19020 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 5.4e-23 110.5 74 74.3
Sp3g32450 Schrenkiella parvula HOM05D008462 ORTHO05D010511 4.2e-20 100.9 73 61.6
Thhalv10023138m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 6.1e-19 97.1 73 61.6
BcaB03g16703 Brassica carinata HOM05D000065 ORTHO05D000162 1.0e-18 96.3 59 67.8
CARHR109540 Cardamine hirsuta HOM05D008462 ORTHO05D010511 1.7e-16 89.0 73 58.9
AT3G25170 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 3.2e-15 84.7 75 53.3
AL3G40860 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 2.0e-14 82.0 75 52.0
Sp3g22770 Schrenkiella parvula HOM05D008462 ORTHO05D010511 2.0e-14 82.0 74 52.7
Thhalv10002753m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 5.9e-14 80.5 74 51.4
CARHR105300 Cardamine hirsuta HOM05D008462 ORTHO05D010511 7.8e-14 80.1 59 62.7
BcaB07g31637 Brassica carinata HOM05D008462 ORTHO05D010511 1.3e-13 79.3 71 54.9
BcaC04g22878 Brassica carinata HOM05D008462 ORTHO05D010511 1.7e-13 79.0 72 52.8
C09p14320 Brassica napus HOM05D008462 ORTHO05D010511 1.7e-13 79.0 72 52.8
BolC9t54335H Brassica oleracea HOM05D008462 ORTHO05D010511 1.7e-13 79.0 72 52.8
CARHR101500 Cardamine hirsuta HOM05D008462 ORTHO05D010511 6.6e-13 77.0 73 49.3
Thhalv10026849m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 6.6e-13 77.0 73 52.1
Aa31sc95G170 Aethionema arabicum HOM05D008462 ORTHO05D010511 8.6e-13 76.6 76 48.7
A07p07140 Brassica napus HOM05D008462 ORTHO05D010511 1.9e-12 75.5 73 54.8
BraA07t28500Z Brassica rapa HOM05D008462 ORTHO05D010511 1.9e-12 75.5 73 54.8
BcaC06g35797 Brassica carinata HOM05D008462 ORTHO05D010511 2.1e-11 72.0 73 52.1
C07p10750 Brassica napus HOM05D008462 ORTHO05D010511 2.1e-11 72.0 73 52.1
BolC7t41541H Brassica oleracea HOM05D008462 ORTHO05D010511 2.1e-11 72.0 73 52.1
AL3G40850 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 4.0e-10 67.8 75 50.7
Carub.0003s2550 Capsella rubella HOM05D008462 ORTHO05D010511 4.0e-10 67.8 76 47.4
Eucgr.L02596 Eucalyptus grandis HOM05D008462 ORTHO05D010511 6.8e-10 67.0 73 47.9
AL9U11140 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 2.6e-09 65.1 74 44.6
CARHR101510 Cardamine hirsuta HOM05D008462 ORTHO05D010511 3.4e-09 64.7 76 44.7
THA.LOC109116491 Tarenaya hassleriana HOM05D008462 ORTHO05D010511 4.4e-09 64.3 48 52.1
BcaB04g21014 Brassica carinata HOM05D023045 ORTHO05D024329 5.8e-09 63.9 66 42.4
BcaC06g30603 Brassica carinata HOM05D008462 ORTHO05D010511 5.8e-09 63.9 70 48.6
AT4G13075 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 9.8e-09 63.2 74 44.6
BcaNung02684 Brassica carinata HOM05D008462 ORTHO05D010511 1.7e-08 62.4 70 50.0
C07p50070 Brassica napus HOM05D008462 ORTHO05D010511 1.7e-08 62.4 70 50.0
BolC7t45511H Brassica oleracea HOM05D008462 ORTHO05D010511 1.7e-08 62.4 70 50.0
AT3G25165 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 2.2e-08 62.0 72 48.6
CARHR101490 Cardamine hirsuta HOM05D008462 ORTHO05D010511 2.2e-08 62.0 74 45.9
BcaB06g28566 Brassica carinata HOM05D008462 ORTHO05D010511 3.7e-08 61.2 70 47.1
BcaC06g30601 Brassica carinata HOM05D008462 ORTHO05D010511 4.9e-08 60.8 71 47.9
BraA03t14245Z Brassica rapa HOM05D008462 ORTHO05D010511 4.9e-08 60.8 70 48.6
Eucgr.E01763 Eucalyptus grandis HOM05D008462 ORTHO05D010511 6.4e-08 60.5 70 42.9
Eucgr.L02598 Eucalyptus grandis HOM05D009215 ORTHO05D010511 1.4e-07 59.3 70 42.9
Gohir.A03G013100 Gossypium hirsutum HOM05D009215 ORTHO05D010851 2.4e-07 58.5 74 43.2
Nn1g08163 Nelumbo nucifera HOM05D057550 ORTHO05D010511 4.1e-07 57.8 71 45.1
CsaV3_UNG233300 Cucumis sativus L. HOM05D010794 ORTHO05D013590 1.6e-06 55.8 74 40.5
Sed0003068 Sechium edule HOM05D010794 ORTHO05D013590 1.6e-06 55.8 72 43.1
Gorai.003G164100 Gossypium raimondii HOM05D009215 ORTHO05D010851 7.8e-06 53.5 74 40.5


User provided reference genes

Program Settings