Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G19020 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 9.6e-36 152.9 74 100.0
AL3G52890 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 2.2e-24 115.2 74 77.0
AT2G19030 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 2.2e-24 115.2 74 77.0
AT2G19045 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 3.8e-24 114.4 74 77.0
AT2G19040 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 2.1e-22 108.6 74 74.3
AL3G52880 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 7.8e-22 106.7 71 74.6
Carub.0003s3341 Capsella rubella HOM05D008462 ORTHO05D010511 5.1e-21 104.0 74 66.2
Carub.0003s3328 Capsella rubella HOM05D008462 ORTHO05D010511 6.6e-21 103.6 74 66.2
Sp3g32450 Schrenkiella parvula HOM05D008462 ORTHO05D010511 2.4e-18 95.1 74 60.8
Thhalv10023138m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 3.4e-17 91.3 74 62.2
BcaB03g16703 Brassica carinata HOM05D000065 ORTHO05D000162 2.3e-13 78.6 59 57.6
CARHR109540 Cardamine hirsuta HOM05D008462 ORTHO05D010511 3.0e-13 78.2 74 56.8
CARHR105300 Cardamine hirsuta HOM05D008462 ORTHO05D010511 8.7e-13 76.6 60 60.0
AT3G25170 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 1.1e-12 76.3 75 52.0
Sp3g22770 Schrenkiella parvula HOM05D008462 ORTHO05D010511 2.5e-12 75.1 74 54.1
BcaC04g22878 Brassica carinata HOM05D008462 ORTHO05D010511 3.3e-12 74.7 73 53.4
C09p14320 Brassica napus HOM05D008462 ORTHO05D010511 3.3e-12 74.7 73 53.4
BolC9t54335H Brassica oleracea HOM05D008462 ORTHO05D010511 3.3e-12 74.7 73 53.4
CARHR101500 Cardamine hirsuta HOM05D008462 ORTHO05D010511 3.3e-12 74.7 73 52.1
Thhalv10002753m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 1.3e-11 72.8 74 52.7
AL3G40860 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 1.1e-10 69.7 75 49.3
Carub.0003s2550 Capsella rubella HOM05D008462 ORTHO05D010511 1.4e-10 69.3 78 51.3
A07p07140 Brassica napus HOM05D008462 ORTHO05D010511 1.8e-10 68.9 73 53.4
BraA07t28500Z Brassica rapa HOM05D008462 ORTHO05D010511 1.8e-10 68.9 73 53.4
Thhalv10026849m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 1.8e-10 68.9 73 47.9
BcaB07g31637 Brassica carinata HOM05D008462 ORTHO05D010511 6.9e-10 67.0 72 52.8
BcaB04g21014 Brassica carinata HOM05D023045 ORTHO05D024329 1.2e-09 66.2 71 39.4
THA.LOC109116491 Tarenaya hassleriana HOM05D008462 ORTHO05D010511 2.6e-09 65.1 48 52.1
BcaC06g35797 Brassica carinata HOM05D008462 ORTHO05D010511 1.0e-08 63.2 73 49.3
C07p10750 Brassica napus HOM05D008462 ORTHO05D010511 1.0e-08 63.2 73 49.3
BolC7t41541H Brassica oleracea HOM05D008462 ORTHO05D010511 1.0e-08 63.2 73 49.3
AL9U11140 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 1.3e-08 62.8 74 47.3
Eucgr.L02596 Eucalyptus grandis HOM05D008462 ORTHO05D010511 1.3e-08 62.8 74 44.6
A01p40150 Brassica napus HOM05D023045 ORTHO05D024329 1.7e-08 62.4 75 44.0
BraA01t04055Z Brassica rapa HOM05D023045 ORTHO05D024329 1.7e-08 62.4 75 44.0
AT4G13075 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 3.8e-08 61.2 74 47.3
BcaC09g48311 Brassica carinata HOM05D023045 ORTHO05D024329 1.1e-07 59.7 76 42.1
BolC1t05106H Brassica oleracea HOM05D023045 ORTHO05D024329 1.1e-07 59.7 76 42.1
Aa31sc95G170 Aethionema arabicum HOM05D008462 ORTHO05D010511 2.5e-07 58.5 76 43.4
BcaNung02684 Brassica carinata HOM05D008462 ORTHO05D010511 3.2e-07 58.2 71 50.7
C07p50070 Brassica napus HOM05D008462 ORTHO05D010511 3.2e-07 58.2 71 50.7
AL3G40850 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 5.5e-07 57.4 75 46.7
BolC7t45511H Brassica oleracea HOM05D008462 ORTHO05D010511 1.2e-06 56.2 71 52.1
BraA03t14245Z Brassica rapa HOM05D008462 ORTHO05D010511 1.2e-06 56.2 71 49.3
BcaC06g30603 Brassica carinata HOM05D008462 ORTHO05D010511 2.1e-06 55.5 71 49.3
Carub.0007s2967 Capsella rubella HOM05D008462 ORTHO05D010511 3.5e-06 54.7 49 51.0
Eucgr.E01763 Eucalyptus grandis HOM05D008462 ORTHO05D010511 3.5e-06 54.7 76 40.8
BcaC06g30601 Brassica carinata HOM05D008462 ORTHO05D010511 4.6e-06 54.3 72 48.6
BcaB06g28566 Brassica carinata HOM05D008462 ORTHO05D010511 6.0e-06 53.9 71 49.3
Eucgr.L02598 Eucalyptus grandis HOM05D009215 ORTHO05D010511 7.9e-06 53.5 76 40.8
Nn1g08163 Nelumbo nucifera HOM05D057550 ORTHO05D010511 7.9e-06 53.5 72 41.7


User provided reference genes

Program Settings