Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G17972 Arabidopsis thaliana HOM05D007514 ORTHO05D009469 2.2e-85 318.9 159 100.0
AL3G51000 Arabidopsis lyrata HOM05D007514 ORTHO05D009469 1.4e-79 299.7 160 93.8
Carub.0003s3210 Capsella rubella HOM05D007514 ORTHO05D009469 2.9e-74 282.0 162 88.9
CARHR108460 Cardamine hirsuta HOM05D007514 ORTHO05D009469 2.2e-69 265.8 162 84.6
Sp3g31390 Schrenkiella parvula HOM05D007514 ORTHO05D009469 1.9e-65 252.7 171 81.3
Thhalv10022884m.g Eutrema salsugineum HOM05D007514 ORTHO05D009469 2.1e-64 249.2 170 78.8
BcaC06g36349 Brassica carinata HOM05D007514 ORTHO05D009469 3.6e-64 248.4 170 80.0
C07p05010 Brassica napus HOM05D007514 ORTHO05D009469 3.6e-64 248.4 170 80.0
BolC7t40902H Brassica oleracea HOM05D007514 ORTHO05D009469 3.6e-64 248.4 170 80.0
A07p02710 Brassica napus HOM05D007514 ORTHO05D009469 1.8e-63 246.1 170 79.4
BraA07t28071Z Brassica rapa HOM05D007514 ORTHO05D009469 1.8e-63 246.1 170 79.4
BcaB03g16581 Brassica carinata HOM05D007514 ORTHO05D009469 2.3e-63 245.7 170 79.4
Aa31LG8G15140 Aethionema arabicum HOM05D007514 ORTHO05D009469 3.9e-50 201.8 174 65.5
THA.LOC104819752 Tarenaya hassleriana HOM05D007514 ORTHO05D009469 6.0e-43 177.9 179 59.2
Potri.005G115000 Populus trichocarpa HOM05D007514 ORTHO05D009469 1.5e-33 146.7 136 58.8
Manes.02G103801 Manihot esculenta HOM05D007514 ORTHO05D009469 4.3e-33 145.2 174 49.4
Lsat_1_v5_gn_3_74241 Lactuca sativa HOM05D007514 ORTHO05D009469 1.6e-32 143.3 106 67.0
Sabra05G0094100 Salix brachista HOM05D007514 ORTHO05D009469 2.1e-32 142.9 108 66.7
Cpa.g.sc6.242 Carica papaya HOM05D007514 ORTHO05D009469 2.8e-32 142.5 169 50.9
Sc16g0002120 Simmondsia chinensis HOM05D007514 ORTHO05D009469 6.2e-32 141.4 106 64.2
Aqoxy5G01772 Aquilegia oxysepala HOM05D007514 ORTHO05D009469 8.1e-32 141.0 156 50.6
Migut.L00252 Erythranthe guttata HOM05D007514 ORTHO05D009469 8.1e-32 141.0 105 70.5
Migut.L00394 Erythranthe guttata HOM05D007514 ORTHO05D009469 8.1e-32 141.0 105 70.5
Hma1.2p1_0743F.1_g211610 Hydrangea macrophylla HOM05D007514 ORTHO05D009469 1.8e-31 139.8 104 65.4
Ah.01g021120 Amaranthus hybridus HOM05D007514 ORTHO05D009469 4.0e-31 138.7 108 61.1
Thecc.01G019700 Theobroma cacao HOM05D007514 ORTHO05D009469 4.0e-31 138.7 112 63.4
AUR62011597 Chenopodium quinoa HOM05D007514 ORTHO05D009469 8.9e-31 137.5 135 52.6
Duzib264G0291 Durio zibethinus HOM05D007514 ORTHO05D009469 1.2e-30 137.1 110 63.6
VMungo0251G0111 Vigna mungo HOM05D007514 ORTHO05D009469 2.0e-30 136.3 122 57.4
CSS0010041 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 2.6e-30 136.0 108 63.9
CSS0030936 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 2.6e-30 136.0 108 63.9
Prupe.7G167500 Prunus persica HOM05D007514 ORTHO05D009469 5.8e-30 134.8 123 60.2
MSTRG.883 Avicennia marina HOM05D007514 ORTHO05D009469 7.6e-30 134.4 106 64.2
DCAR_016611 Daucus carota HOM05D007514 ORTHO05D009469 9.9e-30 134.0 163 50.9
Gohir.A02G170200 Gossypium hirsutum HOM05D007514 ORTHO05D009469 9.9e-30 134.0 108 62.0
unitig_26.g10012 Utricularia gibba HOM05D007514 ORTHO05D009469 1.7e-29 133.3 101 67.3
Gohir.D03G009800 Gossypium hirsutum HOM05D007514 ORTHO05D009469 2.2e-29 132.9 167 47.9
SGA_v2.0_scaffold234G43648 Striga asiatica HOM05D007514 ORTHO05D009469 2.2e-29 132.9 149 50.3
Oeu059507.1 Olea europaea HOM05D007514 ORTHO05D009469 2.9e-29 132.5 128 53.9
TWI09G1362 Tripterygium wilfordii HOM05D007514 ORTHO05D009469 4.9e-29 131.7 160 48.8
Gorai.003G010100 Gossypium raimondii HOM05D007514 ORTHO05D009469 8.4e-29 131.0 170 47.1
MD02G1133200 Malus domestica HOM05D007514 ORTHO05D009469 8.4e-29 131.0 118 60.2
Cc07_g10640 Coffea canephora HOM05D007514 ORTHO05D009469 1.4e-28 130.2 108 62.0
Phvul.003G262200 Phaseolus vulgaris HOM05D007514 ORTHO05D009469 1.9e-28 129.8 106 62.3
Nn6g32368 Nelumbo nucifera HOM05D007514 ORTHO05D009469 2.4e-28 129.4 106 60.4
PGSC0003DMG401003636 Solanum tuberosum HOM05D007514 ORTHO05D009469 4.1e-28 128.6 157 47.8
MBI05_g15346_MAGBIO Magnolia biondii HOM05D007514 ORTHO05D009469 5.4e-28 128.3 165 42.4
QL06p032616 Quercus lobata HOM05D007514 ORTHO05D009469 5.4e-28 128.3 106 60.4
Ciclev10026620m.g Citrus clementina HOM05D007514 ORTHO05D009469 7.1e-28 127.9 166 45.2
COL.COLO4_21918 Corchorus olitorius HOM05D007514 ORTHO05D009469 9.2e-28 127.5 109 60.6
Glyma.02G048800 Glycine max HOM05D007514 ORTHO05D009469 3.5e-27 125.6 100 62.0
Lalb_Chr05g0229901 Lupinus albus HOM05D007514 ORTHO05D009469 3.5e-27 125.6 92 65.2
PGR119G2084 Punica granatum HOM05D007514 ORTHO05D009469 3.5e-27 125.6 127 56.7
Glyma.16G128900 Glycine max HOM05D007514 ORTHO05D009469 4.6e-27 125.2 117 56.4
PSO675G8043 Papaver somniferum HOM05D007514 ORTHO05D009469 4.6e-27 125.2 123 53.7
Lj2P467T19 Lonicera japonica HOM05D007514 ORTHO05D009469 7.8e-27 124.4 92 67.4
PSO541G1849 Papaver somniferum HOM05D007514 ORTHO05D009469 7.8e-27 124.4 121 54.5
Rhsim08G0034000 Rhododendron simsii HOM05D007514 ORTHO05D009469 1.3e-26 123.6 101 59.4
EL10Ac9g21968 Beta vulgaris HOM05D007514 ORTHO05D009469 2.3e-26 122.9 71 73.2
Ca_22373_v3 Cicer arietinum L. HOM05D007514 ORTHO05D009469 3.0e-26 122.5 127 51.2
CANSAT01G2848 Cannabis sativa HOM05D007514 ORTHO05D009469 6.6e-26 121.3 93 65.6
Dinv33625 Davidia involucrata HOM05D007514 ORTHO05D009469 6.6e-26 121.3 106 59.4
MELO3C007896.2 Cucumis melo HOM05D007514 ORTHO05D009469 8.6e-26 120.9 93 63.4
TAR365G1204 Trochodendron aralioides HOM05D007514 ORTHO05D009469 8.6e-26 120.9 146 48.6
arahy.Tifrunner.gnm1.ann1.JXSY0Y Arachis hypogaea HOM05D007514 ORTHO05D009469 1.9e-25 119.8 77 70.1
ClCG01G020240 Citrullus lanatus HOM05D007514 ORTHO05D009469 2.5e-25 119.4 94 61.7
Peaxi162Scf00083g00065 Petunia axillaris HOM05D007514 ORTHO05D009469 2.5e-25 119.4 80 70.0
TAR365G0263 Trochodendron aralioides HOM05D007514 ORTHO05D009469 2.5e-25 119.4 146 47.9
CiPaw.07G058000 Carya illinoinensis HOM05D007514 ORTHO05D009469 3.3e-25 119.0 123 53.7
CsaV3_6G047030 Cucumis sativus L. HOM05D007514 ORTHO05D009469 4.3e-25 118.6 96 59.4
Sopen02g028770 Solanum pennellii HOM05D007514 ORTHO05D009469 7.3e-25 117.9 81 69.1
FvH4_1g11940 Fragaria vesca HOM05D007514 ORTHO05D009469 1.2e-24 117.1 76 71.1
FAN19G0235 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.2e-24 117.1 76 71.1
FAN26G2491 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.2e-24 117.1 76 71.1
Atru.chr3.793 Acer truncatum HOM05D007514 ORTHO05D009469 1.6e-24 116.7 71 74.6
arahy.Tifrunner.gnm1.ann1.EYR4CZ Arachis hypogaea HOM05D007514 ORTHO05D009469 1.6e-24 116.7 175 41.1
Psat4g099040 Pisum sativum HOM05D007514 ORTHO05D009469 1.6e-24 116.7 92 60.9
FAN23G2896 Fragaria x ananassa HOM05D007514 ORTHO05D009469 2.1e-24 116.3 71 74.6
Cfa006967 Carpinus fangiana HOM05D007514 ORTHO05D009469 2.8e-24 115.9 69 73.9
Haze_03771 Corylus avellana HOM05D007514 ORTHO05D009469 2.8e-24 115.9 69 73.9
Lj4g0013490 Lotus japonicus HOM05D007514 ORTHO05D009469 6.2e-24 114.8 78 67.9
Nitab4.5_0006286g0070 Nicotiana tabacum HOM05D007514 ORTHO05D009469 6.2e-24 114.8 76 72.4
Pp3c15_14110 Physcomitrium patens HOM05D007514 ORTHO05D009469 6.2e-24 114.8 130 45.4
Nitab4.5_0001959g0010 Nicotiana tabacum HOM05D007514 ORTHO05D009469 1.4e-23 113.6 146 45.2
Medtr8g075960 Medicago truncatula HOM05D007514 ORTHO05D009469 1.8e-23 113.2 92 63.0
Os06g0715200 Oryza sativa ssp. japonica HOM05D007514 ORTHO05D009469 2.4e-23 112.8 76 65.8
TPR.G30050 Trifolium pratense HOM05D007514 ORTHO05D009469 2.4e-23 112.8 99 59.6
Zm00001eb228020 Zea mays HOM05D007514 ORTHO05D009469 2.4e-23 112.8 75 65.3
Sed0026037 Sechium edule HOM05D007514 ORTHO05D009469 4.0e-23 112.1 158 42.4
Duzib147G0981 Durio zibethinus HOM05D007514 ORTHO05D009469 8.9e-23 110.9 166 43.4
SMO353G0320 Selaginella moellendorffii HOM05D007514 ORTHO05D009469 3.4e-22 109.0 105 51.4
HPP92_025365 Vanilla planifolia HOM05D007514 ORTHO05D009469 2.2e-21 106.3 100 56.0
AagrBONN_evm.TU.Sc2ySwM_344.4071 Anthoceros agrestis HOM05D007514 ORTHO05D009469 3.8e-21 105.5 119 50.4
FAN28G1094 Fragaria x ananassa HOM05D007514 ORTHO05D009469 4.9e-21 105.1 96 58.3
arahy.Tifrunner.gnm1.ann1.KXHU4R Arachis hypogaea HOM05D007514 ORTHO05D009469 2.4e-20 102.8 145 42.1
Mapoly0011s0103 Marchantia polymorpha HOM05D007514 ORTHO05D009469 4.6e-19 98.6 69 63.8
SEGI_16775 Sequoiadendron giganteum HOM05D007514 ORTHO05D009469 3.0e-18 95.9 58 72.4
CAN.G66.6 Capsicum annuum HOM05D007514 ORTHO05D009469 7.3e-17 91.3 80 57.5
Cre05.g245102 Chlamydomonas reinhardtii HOM05D007514 ORTHO05D009469 2.2e-13 79.7 54 61.1


User provided reference genes

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