Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G17695 Arabidopsis thaliana HOM05D007035 ORTHO05D008774 6.6e-119 430.6 206 100.0
Carub.0003s3179 Capsella rubella HOM05D007035 ORTHO05D008774 6.8e-116 420.6 206 96.1
AL3G50680 Arabidopsis lyrata HOM05D007035 ORTHO05D008774 2.0e-115 419.1 206 96.1
Sp3g31080 Schrenkiella parvula HOM05D007035 ORTHO05D008774 9.6e-110 400.2 205 90.7
Thhalv10022849m.g Eutrema salsugineum HOM05D007035 ORTHO05D008774 2.4e-108 395.6 205 89.8
BraA06t26305Z Brassica rapa HOM05D007035 ORTHO05D008774 3.1e-108 395.2 205 87.3
C03p58600 Brassica napus HOM05D007035 ORTHO05D008774 4.0e-108 394.8 205 87.3
A06p33710 Brassica napus HOM05D007035 ORTHO05D008774 8.9e-108 393.7 205 86.8
BcaC01g02899 Brassica carinata HOM05D007035 ORTHO05D008774 2.6e-107 392.1 205 87.3
BolC3t18121H Brassica oleracea HOM05D007035 ORTHO05D008774 2.6e-107 392.1 205 87.3
BcaB08g34751 Brassica carinata HOM05D007035 ORTHO05D008774 1.1e-105 386.7 205 85.9
THA.LOC104807437 Tarenaya hassleriana HOM05D007035 ORTHO05D008774 7.6e-99 364.0 206 81.6
Aa31LG8G14960 Aethionema arabicum HOM05D000088 ORTHO05D000933 3.5e-88 328.6 185 81.6
CiPaw.07G005600 Carya illinoinensis HOM05D007035 ORTHO05D008774 2.8e-85 318.9 205 68.8
Thecc.01G009700 Theobroma cacao HOM05D007035 ORTHO05D008774 3.7e-85 318.5 204 70.1
Gohir.A02G175400 Gossypium hirsutum HOM05D007035 ORTHO05D008774 1.4e-84 316.6 204 69.1
Gorai.003G004700 Gossypium raimondii HOM05D007035 ORTHO05D008774 1.8e-84 316.2 204 69.1
Gohir.D03G004400 Gossypium hirsutum HOM05D007035 ORTHO05D008774 2.0e-83 312.8 204 68.1
Atru.chr3.931 Acer truncatum HOM05D007035 ORTHO05D008774 3.4e-83 312.0 207 67.6
Cfa015701 Carpinus fangiana HOM05D007035 ORTHO05D008774 4.5e-83 311.6 205 66.3
QL06p052348 Quercus lobata HOM05D007035 ORTHO05D008774 4.5e-83 311.6 205 66.8
Ciclev10026505m.g Citrus clementina HOM05D007035 ORTHO05D008774 7.6e-83 310.8 206 67.5
Manes.02G111400 Manihot esculenta HOM05D007035 ORTHO05D008774 1.0e-82 310.5 206 66.5
CSS0018213 Camellia sinensis var. sinensis HOM05D007035 ORTHO05D008774 4.9e-82 308.1 204 66.7
Medtr8g074720 Medicago truncatula HOM05D007035 ORTHO05D008774 4.9e-82 308.1 205 65.9
Eucgr.J02513 Eucalyptus grandis HOM05D007035 ORTHO05D008774 6.5e-82 307.8 208 67.3
MD02G1242600 Malus domestica HOM05D007035 ORTHO05D008774 1.1e-81 307.0 205 64.4
Phvul.003G267600 Phaseolus vulgaris HOM05D007035 ORTHO05D008774 1.4e-81 306.6 205 64.4
Actinidia17600 Actinidia chinensis HOM05D007035 ORTHO05D008774 1.9e-81 306.2 204 64.7
Prupe.7G176600 Prunus persica HOM05D007035 ORTHO05D008774 4.2e-81 305.1 204 66.2
Rhsim08G0078500 Rhododendron simsii HOM05D007035 ORTHO05D008774 5.5e-81 304.7 203 65.0
Lalb_Chr05g0229721 Lupinus albus HOM05D007035 ORTHO05D008774 1.2e-80 303.5 205 63.4
Ca_03644_v3 Cicer arietinum L. HOM05D007035 ORTHO05D008774 1.6e-80 303.1 205 62.9
vmacro18445 Vaccinium macrocarpon HOM05D007035 ORTHO05D008774 3.5e-80 302.0 203 64.5
TWI59G1021 Tripterygium wilfordii HOM05D007035 ORTHO05D008774 4.6e-80 301.6 202 66.3
FvH4_1g10900 Fragaria vesca HOM05D007035 ORTHO05D008774 7.9e-80 300.8 204 63.7
FAN28G2890 Fragaria x ananassa HOM05D007035 ORTHO05D008774 1.3e-79 300.1 204 63.7
Nitab4.5_0001696g0080 Nicotiana tabacum HOM05D007035 ORTHO05D008774 1.3e-79 300.1 204 64.7
Psat4g103040 Pisum sativum HOM05D007035 ORTHO05D008774 1.8e-79 299.7 205 62.9
Lj4g0012539 Lotus japonicus HOM05D007035 ORTHO05D008774 2.3e-79 299.3 205 62.9
Nn6g31845 Nelumbo nucifera HOM05D007035 ORTHO05D008774 2.3e-79 299.3 204 64.2
Potri.005G105500 Populus trichocarpa HOM05D007035 ORTHO05D008774 2.3e-79 299.3 206 66.0
FAN19G1923 Fragaria x ananassa HOM05D007035 ORTHO05D008774 3.0e-79 298.9 204 63.2
TAR628G1604 Trochodendron aralioides HOM05D007035 ORTHO05D008774 3.9e-79 298.5 202 64.9
FAN26G0170 Fragaria x ananassa HOM05D007035 ORTHO05D008774 6.7e-79 297.7 204 63.2
CAN.G890.13 Capsicum annuum HOM05D007035 ORTHO05D008774 1.1e-78 297.0 204 64.7
FAN23G2784 Fragaria x ananassa HOM05D007035 ORTHO05D008774 2.5e-78 295.8 204 63.2
Hma1.2p1_0315F.1_g122740 Hydrangea macrophylla HOM05D007035 ORTHO05D008774 2.5e-78 295.8 203 64.0
PGR102G2581 Punica granatum HOM05D007035 ORTHO05D008774 2.5e-78 295.8 204 63.2
PGSC0003DMG400001578 Solanum tuberosum HOM05D007035 ORTHO05D008774 7.4e-78 294.3 204 65.7
TPR.G32013 Trifolium pratense HOM05D007035 ORTHO05D008774 7.4e-78 294.3 205 62.9
Solyc02g083180.4 Solanum lycopersicum HOM05D007035 ORTHO05D008774 1.6e-77 293.1 204 65.7
Sopen02g027940 Solanum pennellii HOM05D007035 ORTHO05D008774 1.6e-77 293.1 204 65.7
HanXRQChr07g0192541 Helianthus annuus HOM05D007035 ORTHO05D008774 4.8e-77 291.6 206 61.7
EL10Ac9g22991 Beta vulgaris HOM05D007035 ORTHO05D008774 1.4e-76 290.0 203 62.1
Ah.10g032510 Amaranthus hybridus HOM05D007035 ORTHO05D008774 2.4e-76 289.3 206 61.2
Lsat_1_v5_gn_2_75101 Lactuca sativa HOM05D007035 ORTHO05D008774 2.4e-76 289.3 206 62.6
Oeu008100.1 Olea europaea HOM05D007035 ORTHO05D008774 2.4e-76 289.3 204 62.7
ClCG01G020680 Citrullus lanatus HOM05D007035 ORTHO05D008774 4.1e-76 288.5 205 62.9
DCAR_027629 Daucus carota HOM05D007035 ORTHO05D008774 1.5e-75 286.6 198 63.1
arahy.Tifrunner.gnm1.ann1.JN68AD Arachis hypogaea HOM05D007035 ORTHO05D008774 2.0e-75 286.2 206 61.7
arahy.Tifrunner.gnm1.ann1.Y2NACG Arachis hypogaea HOM05D007035 ORTHO05D008774 2.0e-75 286.2 206 61.7
MELO3C007951.2 Cucumis melo HOM05D007035 ORTHO05D008774 2.0e-75 286.2 202 62.9
Sed0013381 Sechium edule HOM05D007035 ORTHO05D008774 2.6e-75 285.8 205 61.0
CsaV3_6G047600 Cucumis sativus L. HOM05D007035 ORTHO05D008774 2.2e-74 282.7 203 62.6
GSVIVG01006258001 Vitis vinifera HOM05D007035 ORTHO05D008774 2.2e-74 282.7 204 60.8
CANSAT25G1910 Cannabis sativa HOM05D007035 ORTHO05D008774 2.9e-74 282.3 207 61.8
AL3G27500 Arabidopsis lyrata HOM05D007035 ORTHO05D008774 3.8e-74 282.0 148 88.5
SalBow5G2770 Salvia bowleyana HOM05D007035 ORTHO05D008774 1.9e-73 279.6 204 59.8
Cc07_g12370 Coffea canephora HOM05D007035 ORTHO05D008774 4.2e-73 278.5 206 60.2
Migut.L00741 Erythranthe guttata HOM05D007035 ORTHO05D008774 1.2e-72 276.9 204 58.3
COL.COLO4_22513 Corchorus olitorius HOM05D007035 ORTHO05D008774 2.7e-72 275.8 202 61.4
CDE09G0622 Ceratophyllum demersum HOM05D007035 ORTHO05D008774 3.6e-72 275.4 202 61.9
SGA_v2.0_scaffold229G43297 Striga asiatica HOM05D001343 ORTHO05D002008 3.6e-72 275.4 203 58.1
VMungo0251G2208 Vigna mungo HOM05D007035 ORTHO05D008774 4.6e-72 275.0 185 64.3
Lj4A228G16 Lonicera japonica HOM05D007035 ORTHO05D008774 1.8e-71 273.1 184 64.7
PSO675G7652 Papaver somniferum HOM05D007035 ORTHO05D008774 3.9e-71 271.9 206 59.7
PSO541G4772 Papaver somniferum HOM05D007035 ORTHO05D008774 8.7e-71 270.8 206 59.7
MBI05_g35104_MAGBIO Magnolia biondii HOM05D007035 ORTHO05D008774 1.4e-68 263.5 211 57.8
unitig_88.g27771 Utricularia gibba HOM05D007035 ORTHO05D008774 2.6e-67 259.2 205 56.1
Peaxi162Scf00300g00123 Petunia axillaris HOM05D007035 ORTHO05D008774 1.3e-66 256.9 174 66.7
ECA238G0027 Erigeron canadensis HOM05D007035 ORTHO05D008774 8.5e-66 254.2 185 59.5
Hund08627 Selenicereus undatus HOM05D007035 ORTHO05D008774 3.2e-65 252.3 203 55.2
AUR62032933 Chenopodium quinoa HOM05D007035 ORTHO05D008774 2.7e-64 249.2 165 64.8
QL06p052340 Quercus lobata HOM05D007035 ORTHO05D008774 6.1e-64 248.1 164 64.6
CARHR107960 Cardamine hirsuta HOM05D007035 ORTHO05D008774 3.9e-63 245.4 121 91.7
HPP92_014997 Vanilla planifolia HOM05D007035 ORTHO05D008774 1.5e-62 243.4 207 53.6
Glyma.16G120900 Glycine max HOM05D007035 ORTHO05D008774 8.2e-61 237.7 161 64.0
RcHm_v2.0_Chr2g0098161 Rosa chinensis HOM05D007035 ORTHO05D008774 1.7e-58 229.9 165 60.0
Os03g0107600 Oryza sativa ssp. japonica HOM05D007035 ORTHO05D008774 2.9e-58 229.2 212 51.9
Os04g0119300 Oryza sativa ssp. japonica HOM05D007035 ORTHO05D008774 2.9e-58 229.2 212 51.9
ATR0661G057 Amborella trichopoda HOM05D007035 ORTHO05D008774 1.4e-57 226.9 187 54.0
Sc20g0005390 Simmondsia chinensis HOM05D007035 ORTHO05D008774 2.7e-56 222.6 147 62.6
Zm00001eb241510 Zea mays HOM05D007035 ORTHO05D008774 2.3e-55 219.5 215 50.7
Pp3c1_37080 Physcomitrium patens HOM05D007035 ORTHO05D008774 5.2e-55 218.4 214 48.1
Dinv40155 Davidia involucrata HOM05D002155 ORTHO05D002215 1.5e-54 216.9 145 62.1
Cpa.g.sc6.337 Carica papaya HOM05D007035 ORTHO05D008774 9.7e-54 214.2 146 65.1
MSTRG.15590 Avicennia marina HOM05D007035 ORTHO05D008774 6.3e-53 211.5 161 54.7
AUR62017739 Chenopodium quinoa HOM05D007035 ORTHO05D008774 4.7e-48 195.3 124 67.7
Mapoly0027s0184 Marchantia polymorpha HOM05D007035 ORTHO05D008774 8.0e-48 194.5 214 43.5
Aqoxy6G01870 Aquilegia oxysepala HOM05D007035 ORTHO05D008774 1.5e-46 190.3 148 57.4
Duzib147G1308 Durio zibethinus HOM05D007035 ORTHO05D008774 1.5e-46 190.3 168 53.0
SMO364G0252 Selaginella moellendorffii HOM05D007035 ORTHO05D008774 1.5e-38 163.7 160 46.9
Eucgr.J01132 Eucalyptus grandis HOM05D007035 ORTHO05D008774 3.7e-37 159.1 145 53.8
Prupe.1G268600 Prunus persica HOM05D007035 ORTHO05D008774 5.9e-35 151.8 106 58.5
Prupe.6G001100 Prunus persica HOM05D007035 ORTHO05D008774 2.3e-34 149.8 106 57.5
AagrBONN_evm.TU.Sc2ySwM_117.3401 Anthoceros agrestis HOM05D007035 ORTHO05D008774 4.7e-32 142.1 156 42.3
PRCOL_00002518 Prasinoderma coloniale HOM05D007035 ORTHO05D008774 1.4e-31 140.6 252 34.9
SEGI_40855 Sequoiadendron giganteum HOM05D007035 ORTHO05D008774 7.5e-30 134.8 168 38.1
Cre17.g720550 Chlamydomonas reinhardtii HOM05D007035 ORTHO05D008774 5.6e-25 118.6 212 31.6
MCO10G322 Micromonas commoda HOM05D007035 ORTHO05D008774 4.0e-23 112.5 147 38.1
CBR_g48433 Chara braunii HOM05D007035 ORTHO05D008774 6.8e-23 111.7 273 24.5
RcHm_v2.0_Chr5g0036401 Rosa chinensis HOM05D007035 ORTHO05D008774 4.4e-22 109.0 107 48.6
Cpa.g.sc6.336 Carica papaya HOM05D007035 ORTHO05D008774 4.7e-16 89.0 59 67.8
Peaxi162Scf00300g00119 Petunia axillaris HOM05D007035 ORTHO05D008774 2.9e-13 79.7 61 59.0
RcHm_v2.0_Chr5g0036471 Rosa chinensis HOM05D007035 ORTHO05D008774 4.9e-13 79.0 56 57.1


User provided reference genes

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