Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G17043 Arabidopsis thaliana HOM05D000192 ORTHO05D000123 9.5e-37 156.4 81 100.0
AL3G49920 Arabidopsis lyrata HOM05D000192 ORTHO05D000123 1.7e-17 92.4 69 73.9
CARHR293370 Cardamine hirsuta HOM05D000192 ORTHO05D000123 2.9e-17 91.7 69 75.4
Carub.0003s3102 Capsella rubella HOM05D000192 ORTHO05D000123 1.1e-16 89.7 69 73.9
AT2G17070 Arabidopsis thaliana HOM05D000192 ORTHO05D000123 1.2e-15 86.3 69 68.1
Carub.0003s3101 Capsella rubella HOM05D000192 ORTHO05D000123 2.0e-15 85.5 69 65.2
AT2G17080 Arabidopsis thaliana HOM05D000192 ORTHO05D000123 7.8e-15 83.6 69 68.1
BcaB08g34694 Brassica carinata HOM05D000192 ORTHO05D000123 4.3e-13 77.8 67 65.7
Thhalv10022962m.g Eutrema salsugineum HOM05D000192 ORTHO05D000123 5.6e-13 77.4 69 63.8
Aa31LG8G14370 Aethionema arabicum HOM05D000192 ORTHO05D000123 7.3e-13 77.0 69 59.4
BcaC06g36218 Brassica carinata HOM05D000192 ORTHO05D000123 9.5e-13 76.6 69 65.2
C07p06430 Brassica napus HOM05D000192 ORTHO05D000123 9.5e-13 76.6 69 65.2
BolC7t41065H Brassica oleracea HOM05D000192 ORTHO05D000123 9.5e-13 76.6 69 65.2
AT4G35200 Arabidopsis thaliana HOM05D000192 ORTHO05D000123 1.2e-12 76.3 69 60.9
CARHR243430 Cardamine hirsuta HOM05D000192 ORTHO05D000123 1.2e-12 76.3 69 63.8
Aa31LG2G14690 Aethionema arabicum HOM05D000192 ORTHO05D000123 1.6e-12 75.9 69 60.9
Aa31LG8G14350 Aethionema arabicum HOM05D000192 ORTHO05D000123 2.1e-12 75.5 69 63.8
C03p57950 Brassica napus HOM05D000192 ORTHO05D000123 2.1e-12 75.5 69 62.3
Aa31LG2G14630 Aethionema arabicum HOM05D000192 ORTHO05D000123 2.8e-12 75.1 69 59.4
Aa31sc739G40 Aethionema arabicum HOM05D000192 ORTHO05D000123 2.8e-12 75.1 69 60.9
BcaC01g02962 Brassica carinata HOM05D000192 ORTHO05D000123 2.8e-12 75.1 69 62.3
C03p57870 Brassica napus HOM05D000192 ORTHO05D000123 2.8e-12 75.1 69 62.3
BolC3t18059H Brassica oleracea HOM05D000192 ORTHO05D000123 2.8e-12 75.1 69 62.3
Thhalv10027560m.g Eutrema salsugineum HOM05D000192 ORTHO05D000123 2.8e-12 75.1 68 63.2
Aa31LG8G14290 Aethionema arabicum HOM05D000192 ORTHO05D000123 3.6e-12 74.7 69 58.0
Aa31sc1096G10 Aethionema arabicum HOM05D000192 ORTHO05D000123 3.6e-12 74.7 69 62.3
BcaC01g02952 Brassica carinata HOM05D000192 ORTHO05D000123 3.6e-12 74.7 69 60.9
BolC3t18068H Brassica oleracea HOM05D000192 ORTHO05D000123 3.6e-12 74.7 69 60.9
BcaB08g34690 Brassica carinata HOM05D000192 ORTHO05D000123 4.7e-12 74.3 69 62.3
BraA03t13749Z Brassica rapa HOM05D000192 ORTHO05D000123 4.7e-12 74.3 69 62.3
CARHR293380 Cardamine hirsuta HOM05D000192 ORTHO05D000123 4.7e-12 74.3 69 63.8
Sp3g30360 Schrenkiella parvula HOM05D000192 ORTHO05D000123 6.2e-12 73.9 69 65.2
A03p46250 Brassica napus HOM05D000192 ORTHO05D000123 8.1e-12 73.6 69 62.3
Carub.0003s3099 Capsella rubella HOM05D000192 ORTHO05D000123 8.1e-12 73.6 69 60.9
Aa31LG8G14390 Aethionema arabicum HOM05D000192 ORTHO05D000123 1.1e-11 73.2 69 59.4
A07p04040 Brassica napus HOM05D000192 ORTHO05D000123 1.1e-11 73.2 66 63.6
BraA07t28195Z Brassica rapa HOM05D000192 ORTHO05D000123 1.1e-11 73.2 66 63.6
Carub.0007s0518 Capsella rubella HOM05D000192 ORTHO05D000123 1.1e-11 73.2 69 58.0
Thhalv10022833m.g Eutrema salsugineum HOM05D000192 ORTHO05D000123 1.1e-11 73.2 66 66.7
Sp7g32960 Schrenkiella parvula HOM05D000192 ORTHO05D000123 1.1e-11 73.2 69 60.9
Thhalv10027348m.g Eutrema salsugineum HOM05D000192 ORTHO05D000123 1.4e-11 72.8 69 59.4
Sp7g32970 Schrenkiella parvula HOM05D000192 ORTHO05D000123 1.4e-11 72.8 69 58.0
AL3G49930 Arabidopsis lyrata HOM05D000192 ORTHO05D000123 1.8e-11 72.4 69 63.8
Aa31LG8G14330 Aethionema arabicum HOM05D000192 ORTHO05D000123 3.1e-11 71.6 69 59.4
Thhalv10026047m.g Eutrema salsugineum HOM05D000192 ORTHO05D000123 3.1e-11 71.6 69 58.0
Carub.0007s0519 Capsella rubella HOM05D000192 ORTHO05D000123 4.0e-11 71.2 69 62.3
CARHR243410 Cardamine hirsuta HOM05D000192 ORTHO05D000123 4.0e-11 71.2 69 58.0
Aa31LG8G14320 Aethionema arabicum HOM05D000192 ORTHO05D000123 5.2e-11 70.9 69 60.9
Aa31LG8G14360 Aethionema arabicum HOM05D000192 ORTHO05D000123 5.2e-11 70.9 69 59.4
CARHR107390 Cardamine hirsuta HOM05D000192 ORTHO05D000123 6.8e-11 70.5 69 59.4
CARHR293360 Cardamine hirsuta HOM05D000192 ORTHO05D000123 6.8e-11 70.5 69 58.0
Thhalv10023068m.g Eutrema salsugineum HOM05D000192 ORTHO05D000123 6.8e-11 70.5 69 60.9
Sp3g30370 Schrenkiella parvula HOM05D000192 ORTHO05D000123 6.8e-11 70.5 69 59.4
AT4G35210 Arabidopsis thaliana HOM05D000192 ORTHO05D000123 1.2e-10 69.7 69 59.4
AL3G49890 Arabidopsis lyrata HOM05D000192 ORTHO05D000123 1.5e-10 69.3 69 58.0
Carub.0007s0510 Capsella rubella HOM05D000192 ORTHO05D000123 1.5e-10 69.3 69 59.4
BcaB08g34691 Brassica carinata HOM05D000192 ORTHO05D000123 2.0e-10 68.9 66 62.1
Aa31LG8G14310 Aethionema arabicum HOM05D000192 ORTHO05D000123 2.6e-10 68.6 69 58.0
Aa31sc1096G40 Aethionema arabicum HOM05D000192 ORTHO05D000123 2.6e-10 68.6 69 58.0
Thhalv10023198m.g Eutrema salsugineum HOM05D000192 ORTHO05D000123 3.4e-10 68.2 69 58.0
BcaNung02383 Brassica carinata HOM05D000192 ORTHO05D000123 7.5e-10 67.0 69 55.1
C07p61040 Brassica napus HOM05D000192 ORTHO05D000123 7.5e-10 67.0 69 55.1
BolC7t46529H Brassica oleracea HOM05D000192 ORTHO05D000123 7.5e-10 67.0 69 55.1
BcaB03g11780 Brassica carinata HOM05D000192 ORTHO05D000123 9.9e-10 66.6 69 50.7
BcaB03g16446 Brassica carinata HOM05D000192 ORTHO05D000123 1.3e-09 66.2 69 59.4
A03p46260 Brassica napus HOM05D000192 ORTHO05D000123 1.3e-09 66.2 66 60.6
A03p63460 Brassica napus HOM05D000192 ORTHO05D000123 1.3e-09 66.2 69 52.2
BraA03t13750Z Brassica rapa HOM05D000192 ORTHO05D000123 1.3e-09 66.2 66 60.6
BcaC01g00834 Brassica carinata HOM05D000192 ORTHO05D000123 1.7e-09 65.9 69 50.7
C03p84970 Brassica napus HOM05D000192 ORTHO05D000123 1.7e-09 65.9 69 50.7
BolC3t20789H Brassica oleracea HOM05D000192 ORTHO05D000123 1.7e-09 65.9 69 50.7
BolC7t41063H Brassica oleracea HOM05D000192 ORTHO05D000123 1.7e-09 65.9 69 58.0
Carub.0003s3100 Capsella rubella HOM05D000192 ORTHO05D000123 1.7e-09 65.9 69 52.2
BcaC01g02961 Brassica carinata HOM05D000192 ORTHO05D000123 2.2e-09 65.5 66 59.1
A08p16290 Brassica napus HOM05D000192 ORTHO05D000123 2.2e-09 65.5 69 52.2
C03p57880 Brassica napus HOM05D000192 ORTHO05D000123 2.2e-09 65.5 66 59.1
BolC3t18060H Brassica oleracea HOM05D000192 ORTHO05D000123 2.2e-09 65.5 66 59.1
BraA08t33599Z Brassica rapa HOM05D000192 ORTHO05D000123 2.2e-09 65.5 69 52.2
A07p04030 Brassica napus HOM05D000192 ORTHO05D000123 2.9e-09 65.1 69 56.5
BraA07t28194Z Brassica rapa HOM05D000192 ORTHO05D000123 2.9e-09 65.1 69 56.5
BcaC01g00833 Brassica carinata HOM05D000192 ORTHO05D000123 4.9e-09 64.3 67 55.2
C03p84960 Brassica napus HOM05D000192 ORTHO05D000123 4.9e-09 64.3 67 55.2
BolC3t20788H Brassica oleracea HOM05D000192 ORTHO05D000123 4.9e-09 64.3 67 55.2
Sp7g32980 Schrenkiella parvula HOM05D000192 ORTHO05D000123 4.9e-09 64.3 67 55.2
BcaNung04607 Brassica carinata HOM05D000192 ORTHO05D000123 6.4e-09 63.9 69 56.5
A08p16280 Brassica napus HOM05D000192 ORTHO05D000123 8.3e-09 63.5 67 53.7
BraA08t33598Z Brassica rapa HOM05D000192 ORTHO05D000123 8.3e-09 63.5 67 53.7
THA.LOC104819674 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 8.3e-09 63.5 69 55.1
BcaC06g36219 Brassica carinata HOM05D000192 ORTHO05D000123 1.1e-08 63.2 69 55.1
C07p06420 Brassica napus HOM05D000192 ORTHO05D000123 1.1e-08 63.2 69 55.1
Sp3g30390 Schrenkiella parvula HOM05D000192 ORTHO05D000123 1.1e-08 63.2 61 60.7
BcaB03g16447 Brassica carinata HOM05D000192 ORTHO05D000123 3.2e-08 61.6 69 55.1
THA.LOC104819667 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 3.2e-08 61.6 69 53.6
THA.LOC104819669 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 3.2e-08 61.6 69 53.6
BcaB03g11779 Brassica carinata HOM05D000192 ORTHO05D000123 7.1e-08 60.5 67 52.2
BcaNung04608 Brassica carinata HOM05D000192 ORTHO05D000123 9.2e-08 60.1 67 50.7
THA.LOC104819677 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 1.6e-07 59.3 69 52.2
BraA03t15417Z Brassica rapa HOM05D000192 ORTHO05D000123 2.1e-07 58.9 77 46.8
THA.LOC104819670 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 2.1e-07 58.9 67 46.3
THA.LOC104819673 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 3.5e-07 58.2 69 47.8
THA.LOC104819671 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 6.0e-07 57.4 69 52.2
THA.LOC104819678 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 6.0e-07 57.4 69 52.2
THA.LOC104807391 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 7.8e-07 57.0 69 47.8
THA.LOC104819668 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 3.0e-06 55.1 69 44.9
THA.LOC104819672 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 3.0e-06 55.1 69 47.8


User provided reference genes

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