Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G15180 Arabidopsis thaliana HOM05D028022 ORTHO05D031453 2.6e-283 978.0 475 100.0
AT3G43470 Arabidopsis thaliana HOM05D028022 ORTHO05D013758 2.4e-111 406.8 478 51.9
AT2G15185 Arabidopsis thaliana HOM05D028022 ORTHO05D013758 3.6e-35 153.7 78 92.3
Thhalv10019470m.g Eutrema salsugineum HOM05D013010 ORTHO05D018622 4.4e-25 120.2 335 32.2
AT3G43480 Arabidopsis thaliana HOM05D028022 ORTHO05D013758 2.7e-22 110.9 72 73.6
BcaC01g03557 Brassica carinata HOM05D013010 ORTHO05D018622 2.1e-19 101.3 281 29.9
BcaC05g27536 Brassica carinata HOM05D013010 ORTHO05D018622 3.5e-14 84.0 417 25.2
C07p11190 Brassica napus HOM05D013010 ORTHO05D018622 2.1e-11 74.7 377 26.5
Carub.0008s0740 Capsella rubella HOM05D040730 ORTHO05D019747 6.2e-11 73.2 110 33.6
Carub.0002s0978 Capsella rubella HOM05D029864 ORTHO05D031471 3.1e-10 70.9 291 27.8
C09p36570 Brassica napus HOM05D066146 ORTHO05D031453 4.4e-09 67.0 156 35.3
BolC9t56490H Brassica oleracea HOM05D066146 ORTHO05D031453 4.4e-09 67.0 156 35.3
AL2G24450 Arabidopsis lyrata HOM05D024632 ORTHO05D031429 2.2e-08 64.7 81 37.0
BcaC06g35658 Brassica carinata HOM05D010891 ORTHO05D014503 2.2e-08 64.7 300 25.7
BraA01t02922Z Brassica rapa HOM05D013010 ORTHO05D018622 2.2e-08 64.7 288 26.4
SHI35363 Sapria himalayana HOM05D000004 ORTHO05D000002 7.1e-07 59.7 151 25.2
SpUn0158_0010 Schrenkiella parvula HOM05D008612 ORTHO05D010584 9.2e-07 59.3 89 34.8
SHI46737 Sapria himalayana HOM05D000004 ORTHO05D000002 1.6e-06 58.5 159 25.8
SHI47627 Sapria himalayana HOM05D000004 ORTHO05D000002 1.6e-06 58.5 146 28.8
TAR135G0002 Trochodendron aralioides HOM05D000004 ORTHO05D000002 1.6e-06 58.5 69 33.3
AT4G07350 Arabidopsis thaliana HOM05D040730 ORTHO05D019747 6.0e-06 56.6 80 38.8
Hma1.2p1_1176F.1_g264230 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 6.0e-06 56.6 140 29.3
SHI41943 Sapria himalayana HOM05D000004 ORTHO05D000002 6.0e-06 56.6 125 26.4


User provided reference genes

Program Settings