Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G14288 Arabidopsis thaliana HOM05D000249 ORTHO05D014429 7.6e-146 520.4 247 100.0
BcaC05g25141 Brassica carinata HOM05D000249 ORTHO05D014429 9.5e-56 221.1 215 50.7
BcaC05g25104 Brassica carinata HOM05D000249 ORTHO05D014429 2.1e-55 219.9 214 51.4
BcaC05g25412 Brassica carinata HOM05D000249 ORTHO05D014429 1.8e-54 216.9 215 50.7
C05p12880 Brassica napus HOM05D000249 ORTHO05D014429 1.8e-54 216.9 215 50.7
BolC5t30035H Brassica oleracea HOM05D000249 ORTHO05D014429 1.8e-54 216.9 215 50.7
C05p10330 Brassica napus HOM05D000249 ORTHO05D014429 2.3e-54 216.5 212 51.9
BolC5t29779H Brassica oleracea HOM05D000249 ORTHO05D014429 2.3e-54 216.5 212 50.5
BraA06t24071Z Brassica rapa HOM05D000249 ORTHO05D014429 7.6e-53 211.5 217 49.8
Carub.0003s0535 Capsella rubella HOM05D000249 ORTHO05D014429 2.9e-44 183.0 220 47.3
Thhalv10026874m.g Eutrema salsugineum HOM05D000249 ORTHO05D014429 6.4e-44 181.8 216 46.3
CARHR100900 Cardamine hirsuta HOM05D000249 ORTHO05D014429 1.0e-41 174.5 238 43.7
A06p08740 Brassica napus HOM05D000249 ORTHO05D014429 3.6e-39 166.0 147 53.7
AL7G12760 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 9.3e-35 151.4 204 43.6
AL7G12790 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 3.9e-33 146.0 209 39.7
Thhalv10005688m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 3.6e-31 139.4 207 40.6
BcaNung04321 Brassica carinata HOM05D000249 ORTHO05D032890 9.0e-30 134.8 207 38.6
Thhalv10005562m.g Eutrema salsugineum HOM05D000249 ORTHO05D024610 2.0e-29 133.7 200 40.0
Carub.0003s2500 Capsella rubella HOM05D000249 ORTHO05D000206 3.4e-29 132.9 206 39.8
Thhalv10022697m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 3.4e-29 132.9 193 39.4
BraA03t15259Z Brassica rapa HOM05D000249 ORTHO05D032890 5.8e-29 132.1 206 37.9
Carub.0008s0634 Capsella rubella HOM05D000249 ORTHO05D000206 9.9e-29 131.3 201 39.3
Aa31LG6G15360 Aethionema arabicum HOM05D000249 ORTHO05D000206 8.4e-28 128.3 209 35.4
A08p30690 Brassica napus HOM05D000249 ORTHO05D000206 1.1e-27 127.9 202 37.6
BraA08t34999Z Brassica rapa HOM05D000249 ORTHO05D000206 1.1e-27 127.9 202 37.6
Thhalv10004132m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 1.4e-27 127.5 210 38.6
A03p62220 Brassica napus HOM05D000249 ORTHO05D032890 1.9e-27 127.1 208 37.5
Thhalv10027306m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 1.6e-26 124.0 199 39.7
AL7G13600 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.8e-25 120.6 212 37.7
AL3G40190 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 3.9e-25 119.4 160 40.6
AL7G14590 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 6.7e-25 118.6 213 36.6
AT3G24610 Arabidopsis thaliana HOM05D000249 ORTHO05D014429 1.9e-24 117.1 214 37.4
A10p16010 Brassica napus HOM05D000249 ORTHO05D000206 2.5e-24 116.7 221 34.4
BolC9t57866H Brassica oleracea HOM05D000249 ORTHO05D000206 4.3e-24 115.9 220 33.6
BraA10t43368Z Brassica rapa HOM05D000249 ORTHO05D000206 4.3e-24 115.9 221 33.5
BraA10t43371Z Brassica rapa HOM05D000249 ORTHO05D000206 8.1e-23 111.7 193 34.2
BcaC04g19894 Brassica carinata HOM05D000249 ORTHO05D000206 1.1e-22 111.3 199 34.2
A10p12760 Brassica napus HOM05D000249 ORTHO05D000206 1.1e-22 111.3 200 34.0
Sp7g31430 Schrenkiella parvula HOM05D000249 ORTHO05D000206 1.8e-22 110.5 194 36.1
BolC9t57497H Brassica oleracea HOM05D000249 ORTHO05D000206 6.9e-22 108.6 203 36.9
C09p46320 Brassica napus HOM05D000249 ORTHO05D000206 2.6e-21 106.7 203 36.0
Thhalv10025324m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 4.9e-20 102.4 210 32.9
AL7G11730 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 2.5e-19 100.1 212 34.4
A02p14670 Brassica napus HOM05D000249 ORTHO05D000206 2.5e-19 100.1 188 34.0
BraA02t06534Z Brassica rapa HOM05D000249 ORTHO05D000206 2.5e-19 100.1 188 34.0
BolC2t08508H Brassica oleracea HOM05D000249 ORTHO05D000206 4.2e-19 99.4 190 33.7
Carub.0011s0005 Capsella rubella HOM05D000249 ORTHO05D000206 5.5e-19 99.0 178 35.4
C02p23780 Brassica napus HOM05D000249 ORTHO05D000206 6.0e-18 95.5 190 33.2
A10p12790 Brassica napus HOM05D000249 ORTHO05D000206 2.3e-17 93.6 112 40.2
CARHR210870 Cardamine hirsuta HOM05D000249 ORTHO05D000206 3.0e-17 93.2 198 31.3
Thhalv10019855m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 5.1e-17 92.4 172 37.2
Carub.0008s0622 Capsella rubella HOM05D000249 ORTHO05D000206 8.7e-17 91.7 222 32.0
BcaC03g14901 Brassica carinata HOM05D000249 ORTHO05D024041 1.1e-16 91.3 180 32.8
BcaC07g38169 Brassica carinata HOM05D000249 ORTHO05D024041 1.9e-16 90.5 207 31.4
A08p21350 Brassica napus HOM05D000249 ORTHO05D024041 1.9e-16 90.5 183 33.9
C09p50130 Brassica napus HOM05D000249 ORTHO05D000206 3.3e-16 89.7 132 35.6
BolC8t48591H Brassica oleracea HOM05D000249 ORTHO05D024041 3.3e-16 89.7 183 31.1
BolC7t41748H Brassica oleracea HOM05D000249 ORTHO05D000206 1.1e-14 84.7 191 29.3
BraA07t31350Z Brassica rapa HOM05D000249 ORTHO05D000206 1.1e-14 84.7 190 31.6
AL7G14140 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 3.1e-14 83.2 207 30.4
BcaC08g45761 Brassica carinata HOM05D000249 ORTHO05D000206 6.9e-14 82.0 179 31.3
Carub.0002s2327 Capsella rubella HOM05D000249 ORTHO05D000206 6.9e-14 82.0 173 30.6
C06p35430 Brassica napus HOM05D000249 ORTHO05D000206 1.2e-13 81.3 182 31.3
A02p00980 Brassica napus HOM05D000249 ORTHO05D000206 1.5e-13 80.9 204 30.4
BolC6t38657H Brassica oleracea HOM05D000249 ORTHO05D000206 2.6e-13 80.1 183 32.2
BolC6t38660H Brassica oleracea HOM05D000249 ORTHO05D000206 2.6e-13 80.1 183 32.2
BraA07t30698Z Brassica rapa HOM05D000249 ORTHO05D000206 2.6e-13 80.1 183 32.2
BcaNung01924 Brassica carinata HOM05D000249 ORTHO05D000206 7.6e-13 78.6 205 30.2
BolC6t38664H Brassica oleracea HOM05D000249 ORTHO05D000206 1.3e-12 77.8 207 32.4
BraA08t34282Z Brassica rapa HOM05D000249 ORTHO05D000206 1.7e-12 77.4 203 30.0
C06p45750 Brassica napus HOM05D000249 ORTHO05D000206 2.2e-12 77.0 183 32.2
BolC2t06456H Brassica oleracea HOM05D000249 ORTHO05D000206 2.2e-12 77.0 204 30.4
BcaC03g13372 Brassica carinata HOM05D000249 ORTHO05D000206 2.9e-12 76.6 204 30.4
BolC6t38651H Brassica oleracea HOM05D000249 ORTHO05D000206 2.9e-12 76.6 184 31.5
A08p23270 Brassica napus HOM05D000249 ORTHO05D000206 3.8e-12 76.3 203 30.0
BcaC03g15449 Brassica carinata HOM05D000249 ORTHO05D000206 5.0e-12 75.9 172 32.6
A05p34450 Brassica napus HOM05D000249 ORTHO05D000206 5.0e-12 75.9 209 27.8
BcaNung00910 Brassica carinata HOM05D000249 ORTHO05D000206 6.5e-12 75.5 207 29.0
A02p18860 Brassica napus HOM05D000249 ORTHO05D000206 6.5e-12 75.5 164 32.9
C01p00900 Brassica napus HOM05D000249 ORTHO05D000206 6.5e-12 75.5 207 29.0
BolC1t00091H Brassica oleracea HOM05D000249 ORTHO05D000206 6.5e-12 75.5 207 29.0
BraA02t06930Z Brassica rapa HOM05D000249 ORTHO05D000206 6.5e-12 75.5 164 32.9
Sp6g32200 Schrenkiella parvula HOM05D000249 ORTHO05D000206 6.5e-12 75.5 189 27.5
BcaB05g24808 Brassica carinata HOM05D000249 ORTHO05D000206 1.4e-11 74.3 182 31.3
C02p05010 Brassica napus HOM05D000249 ORTHO05D000206 1.4e-11 74.3 206 30.1
C02p05160 Brassica napus HOM05D000249 ORTHO05D000206 1.4e-11 74.3 204 29.9
BolC2t06466H Brassica oleracea HOM05D000249 ORTHO05D000206 1.4e-11 74.3 204 29.9
BraA10t42698Z Brassica rapa HOM05D000249 ORTHO05D000206 1.4e-11 74.3 180 28.9
BcaC03g13364 Brassica carinata HOM05D000249 ORTHO05D000206 1.9e-11 73.9 189 31.2
BcaNung05422 Brassica carinata HOM05D000249 ORTHO05D000206 2.5e-11 73.6 185 27.0
A03p18900 Brassica napus HOM05D000249 ORTHO05D016802 2.5e-11 73.6 205 31.7
BcaB05g24810 Brassica carinata HOM05D000249 ORTHO05D000206 3.2e-11 73.2 182 31.9
C02p31380 Brassica napus HOM05D000249 ORTHO05D000206 3.2e-11 73.2 172 32.6
C05p52460 Brassica napus HOM05D000249 ORTHO05D000206 3.2e-11 73.2 201 31.8
BcaC05g29035 Brassica carinata HOM05D000249 ORTHO05D000206 4.2e-11 72.8 200 31.5
A03p58680 Brassica napus HOM05D000249 ORTHO05D033784 4.2e-11 72.8 206 26.7
C05p04170 Brassica napus HOM05D000249 ORTHO05D000206 4.2e-11 72.8 179 27.9
BolC5t33930H Brassica oleracea HOM05D000249 ORTHO05D000206 4.2e-11 72.8 200 31.5
BraA03t11149Z Brassica rapa HOM05D000249 ORTHO05D016802 4.2e-11 72.8 205 31.7
A10p31990 Brassica napus HOM05D000249 ORTHO05D000206 5.5e-11 72.4 208 30.3
BraA10t45243Z Brassica rapa HOM05D000249 ORTHO05D000206 5.5e-11 72.4 208 30.3
A02p18850 Brassica napus HOM05D000249 ORTHO05D000206 7.2e-11 72.0 203 33.0
BolC5t29192H Brassica oleracea HOM05D000249 ORTHO05D000206 7.2e-11 72.0 179 27.9
BraA02t06929Z Brassica rapa HOM05D000249 ORTHO05D000206 7.2e-11 72.0 203 33.0
AT4G36840 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 9.3e-11 71.6 166 29.5
A07p36760 Brassica napus HOM05D000249 ORTHO05D017420 9.3e-11 71.6 208 30.8
Thhalv10025580m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 1.2e-10 71.2 178 30.3
BolC2t09170H Brassica oleracea HOM05D000249 ORTHO05D000206 2.1e-10 70.5 172 32.0
BcaB01g03919 Brassica carinata HOM05D000249 ORTHO05D016802 4.6e-10 69.3 184 33.2
AL7G30180 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 7.9e-10 68.6 209 30.1
Thhalv10018915m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 7.9e-10 68.6 180 28.9
Thhalv10019507m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 7.9e-10 68.6 180 28.9
BolC3t14575H Brassica oleracea HOM05D000249 ORTHO05D016802 1.0e-09 68.2 205 30.2
BcaC03g15452 Brassica carinata HOM05D000249 ORTHO05D000206 2.3e-09 67.0 209 30.1
A05p34670 Brassica napus HOM05D000249 ORTHO05D000206 2.3e-09 67.0 204 31.4
C02p31260 Brassica napus HOM05D000249 ORTHO05D000206 2.3e-09 67.0 203 32.5
C03p22030 Brassica napus HOM05D000249 ORTHO05D016802 2.3e-09 67.0 205 30.2
BraA05t22283Z Brassica rapa HOM05D000249 ORTHO05D000206 2.3e-09 67.0 204 31.4
AL2G28170 Arabidopsis lyrata HOM05D000249 ORTHO05D017420 3.0e-09 66.6 188 30.3
CARHR246290 Cardamine hirsuta HOM05D000249 ORTHO05D000206 3.0e-09 66.6 165 29.7
AL7G12140 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 5.1e-09 65.9 179 25.7
AL7G13810 Arabidopsis lyrata HOM05D000249 ORTHO05D015901 5.1e-09 65.9 137 34.3
BolC5t28889H Brassica oleracea HOM05D000249 ORTHO05D015346 5.1e-09 65.9 194 25.8
BcaC07g38170 Brassica carinata HOM05D000249 ORTHO05D024041 8.7e-09 65.1 207 28.5
Carub.0003s3024 Capsella rubella HOM05D000249 ORTHO05D024610 1.1e-08 64.7 146 30.1
AL7G33450 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.5e-08 64.3 186 28.5
Sp5g25620 Schrenkiella parvula HOM05D000249 ORTHO05D017420 2.5e-08 63.5 157 31.2
Carub.0004s0109 Capsella rubella HOM05D000249 ORTHO05D000206 1.3e-07 61.2 185 25.9
A10p04410 Brassica napus HOM05D000249 ORTHO05D000206 1.6e-07 60.8 159 27.7
CARHR041170 Cardamine hirsuta HOM05D000249 ORTHO05D000206 2.2e-07 60.5 175 26.3
Thhalv10029391m.g Eutrema salsugineum HOM05D000249 ORTHO05D015346 2.8e-07 60.1 89 34.8
Aa31LG7G14700 Aethionema arabicum HOM05D000249 ORTHO05D000206 4.8e-07 59.3 196 25.5
BcaC08g46596 Brassica carinata HOM05D000249 ORTHO05D000206 4.8e-07 59.3 69 39.1
A09p21200 Brassica napus HOM05D000249 ORTHO05D000206 4.8e-07 59.3 182 26.9
BraA09t37726Z Brassica rapa HOM05D000249 ORTHO05D000206 4.8e-07 59.3 182 26.9
Sp4g01030 Schrenkiella parvula HOM05D000249 ORTHO05D000206 6.3e-07 58.9 185 26.5
Carub.0007s2579 Capsella rubella HOM05D000249 ORTHO05D000206 8.2e-07 58.5 89 34.8
Thhalv10029221m.g Eutrema salsugineum HOM05D000249 ORTHO05D017420 8.2e-07 58.5 165 29.1
AL7G50760 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 6.9e-06 55.5 183 26.8


User provided reference genes

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