Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G14095 Arabidopsis thaliana HOM05D007310 ORTHO05D002375 1.7e-126 456.1 235 100.0
AL3G45790 Arabidopsis lyrata HOM05D007310 ORTHO05D002375 1.8e-112 409.5 234 91.5
Carub.0003s2834 Capsella rubella HOM05D007310 ORTHO05D002375 2.1e-108 396.0 237 86.5
CARHR104210 Cardamine hirsuta HOM05D007310 ORTHO05D002375 4.9e-102 374.8 236 80.5
Sp3g27450 Schrenkiella parvula HOM05D007310 ORTHO05D002375 1.6e-89 333.2 234 74.8
BcaC01g03103 Brassica carinata HOM05D007310 ORTHO05D002375 1.3e-86 323.6 234 73.5
C03p56020 Brassica napus HOM05D007310 ORTHO05D002375 2.1e-84 316.2 235 72.8
BolC3t17888H Brassica oleracea HOM05D007310 ORTHO05D002375 2.1e-84 316.2 235 72.8
BraA03t13650Z Brassica rapa HOM05D007310 ORTHO05D002375 2.3e-83 312.8 234 71.4
Thhalv10022863m.g Eutrema salsugineum HOM05D007310 ORTHO05D002375 2.5e-82 309.3 189 80.4
A03p45150 Brassica napus HOM05D007310 ORTHO05D002375 9.6e-82 307.4 234 70.1
BcaB08g34551 Brassica carinata HOM05D007310 ORTHO05D002375 1.3e-81 307.0 235 70.2
Aa31LG8G12500 Aethionema arabicum HOM05D007310 ORTHO05D002375 7.0e-40 168.3 221 47.1
THA.LOC104804411 Tarenaya hassleriana HOM05D007310 ORTHO05D002375 2.5e-37 159.8 218 44.0
Lalb_Chr09g0326871 Lupinus albus HOM05D007310 ORTHO05D002375 3.2e-29 132.9 195 41.0
FvH4_2g13500 Fragaria vesca HOM05D007310 ORTHO05D002375 2.3e-27 126.7 164 42.7
Potri.001G310100 Populus trichocarpa HOM05D007310 ORTHO05D002375 3.0e-27 126.3 161 44.1
FAN24G3359 Fragaria x ananassa HOM05D007310 ORTHO05D004145 5.2e-27 125.6 164 42.1
Medtr4g093820 Medicago truncatula HOM05D007310 ORTHO05D002375 1.2e-23 114.4 152 40.8
Cfa005685 Carpinus fangiana HOM05D007310 ORTHO05D002375 5.9e-23 112.1 128 45.3
SalBow8G1210 Salvia bowleyana HOM05D007310 ORTHO05D002375 7.7e-23 111.7 147 40.8
TPR.G2868 Trifolium pratense HOM05D007310 ORTHO05D002375 1.0e-22 111.3 193 36.3
RcHm_v2.0_Chr7g0236611 Rosa chinensis HOM05D007310 ORTHO05D002375 1.3e-22 110.9 187 33.7
arahy.Tifrunner.gnm1.ann1.KVX74B Arachis hypogaea HOM05D007310 ORTHO05D002375 2.3e-22 110.2 142 43.7
arahy.Tifrunner.gnm1.ann1.U7VQVC Arachis hypogaea HOM05D007310 ORTHO05D002375 2.9e-22 109.8 148 42.6
Migut.B00577 Erythranthe guttata HOM05D007310 ORTHO05D002375 3.8e-22 109.4 123 44.7
FAN27G1440 Fragaria x ananassa HOM05D007310 ORTHO05D002375 3.8e-22 109.4 147 40.1
SGA_v2.0_scaffold14G07142 Striga asiatica HOM05D007310 ORTHO05D002375 3.8e-22 109.4 175 36.0
Ciclev10030152m.g Citrus clementina HOM05D007310 ORTHO05D002375 1.1e-21 107.8 138 41.3
PGSC0003DMG400012536 Solanum tuberosum HOM05D007310 ORTHO05D002375 1.1e-21 107.8 135 44.4
Ca_18369_v3 Cicer arietinum L. HOM05D007310 ORTHO05D002375 1.5e-21 107.5 160 43.1
VMungo0251G1327 Vigna mungo HOM05D007310 ORTHO05D002375 1.5e-21 107.5 140 41.4
Peaxi162Scf00299g00914 Petunia axillaris HOM05D007310 ORTHO05D002375 1.9e-21 107.1 162 40.7
Eucgr.I02631 Eucalyptus grandis HOM05D007310 ORTHO05D002375 5.6e-21 105.5 140 42.9
GSVIVG01015685001 Vitis vinifera HOM05D007310 ORTHO05D002375 7.3e-21 105.1 143 44.1
TWI14G0938 Tripterygium wilfordii HOM05D007310 ORTHO05D002375 1.6e-20 104.0 140 39.3
Cpa.g.sc42.21 Carica papaya HOM05D007310 ORTHO05D002375 2.8e-20 103.2 139 41.0
COL.COLO4_32323 Corchorus olitorius HOM05D007310 ORTHO05D002375 3.6e-20 102.8 164 35.4
Duzib248G0762 Durio zibethinus HOM05D007310 ORTHO05D002375 3.6e-20 102.8 169 36.7
Glyma.13G042400 Glycine max HOM05D007310 ORTHO05D002375 3.6e-20 102.8 133 43.6
Haze_10565 Corylus avellana HOM05D007310 ORTHO05D002375 4.7e-20 102.4 137 40.9
Thecc.02G133200 Theobroma cacao HOM05D007310 ORTHO05D002375 4.7e-20 102.4 173 37.0
CAN.G523.36 Capsicum annuum HOM05D007310 ORTHO05D002375 1.0e-19 101.3 152 38.2
Potri.017G050000 Populus trichocarpa HOM05D007310 ORTHO05D002375 1.8e-19 100.5 122 40.2
Nitab4.5_0006625g0010 Nicotiana tabacum HOM05D007310 ORTHO05D002375 2.3e-19 100.1 140 40.0
Psat7g100440 Pisum sativum HOM05D007310 ORTHO05D002375 3.0e-19 99.8 146 38.4
Sopen01g048060 Solanum pennellii HOM05D007310 ORTHO05D002375 4.0e-19 99.4 148 39.2
Solyc01g105600.3 Solanum lycopersicum HOM05D007310 ORTHO05D002375 6.8e-19 98.6 135 42.2
Prupe.8G066300 Prunus persica HOM05D007310 ORTHO05D002375 8.9e-19 98.2 167 36.5
Dinv24166 Davidia involucrata HOM05D007310 ORTHO05D002375 4.4e-18 95.9 171 33.9
CiPaw.05G032100 Carya illinoinensis HOM05D007310 ORTHO05D002375 5.7e-18 95.5 123 43.1
CANSAT11G0123 Cannabis sativa HOM05D007310 ORTHO05D002375 7.5e-18 95.1 185 34.6
Rhsim05G0103200 Rhododendron simsii HOM05D007310 ORTHO05D002375 1.3e-17 94.4 136 41.9
Sabra16G0196000 Salix brachista HOM05D007310 ORTHO05D002375 1.3e-17 94.4 192 33.9
Manes.07G038100 Manihot esculenta HOM05D007310 ORTHO05D002375 1.7e-17 94.0 130 36.2
PGR142G1548 Punica granatum HOM05D007310 ORTHO05D002375 1.7e-17 94.0 183 32.2
Manes.07G035800 Manihot esculenta HOM05D007310 ORTHO05D002375 2.9e-17 93.2 130 36.9
Hma1.2p1_0784F.1_g217300 Hydrangea macrophylla HOM05D007310 ORTHO05D002375 3.7e-17 92.8 116 41.4
Oeu022081.1 Olea europaea HOM05D007310 ORTHO05D002375 3.7e-17 92.8 140 36.4
Lj4g0014623 Lotus japonicus HOM05D007310 ORTHO05D002375 4.9e-17 92.4 144 38.9
FAN15G0442 Fragaria x ananassa HOM05D007310 ORTHO05D002375 6.4e-17 92.0 154 34.4
Sc08g0003780 Simmondsia chinensis HOM05D007310 ORTHO05D002375 6.4e-17 92.0 210 32.4
Cc02_g21140 Coffea canephora HOM05D007310 ORTHO05D002375 1.4e-16 90.9 139 36.7
HanXRQChr10g0290991 Helianthus annuus HOM05D007310 ORTHO05D002375 1.4e-16 90.9 163 34.4
AUR62011722 Chenopodium quinoa HOM05D007310 ORTHO05D002375 1.8e-16 90.5 129 39.5
CSS0047922 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 2.4e-16 90.1 159 32.7
Phvul.002G211100 Phaseolus vulgaris HOM05D007310 ORTHO05D002375 2.4e-16 90.1 125 41.6
Nitab4.5_0000863g0020 Nicotiana tabacum HOM05D007310 ORTHO05D002375 7.0e-16 88.6 121 39.7
QL11p023211 Quercus lobata HOM05D007310 ORTHO05D002375 7.0e-16 88.6 144 36.1
AUR62012905 Chenopodium quinoa HOM05D007310 ORTHO05D002375 1.6e-15 87.4 129 38.0
CiPaw.06G156100 Carya illinoinensis HOM05D007310 ORTHO05D002375 2.7e-15 86.7 121 39.7
Sabra17G0036600 Salix brachista HOM05D007310 ORTHO05D002375 2.7e-15 86.7 96 46.9
Gohir.D02G199400 Gossypium hirsutum HOM05D007310 ORTHO05D002375 7.8e-15 85.1 124 37.9
MD05G1054900 Malus domestica HOM05D007310 ORTHO05D002375 7.8e-15 85.1 201 29.9
PSO761G0222 Papaver somniferum HOM05D007310 ORTHO05D002375 7.8e-15 85.1 203 29.6
MELO3C018616.2 Cucumis melo HOM05D007310 ORTHO05D002375 1.0e-14 84.7 130 40.0
EL10Ac9g21224 Beta vulgaris HOM05D007310 ORTHO05D002375 1.3e-14 84.3 127 37.0
Sabra17G0042000 Salix brachista HOM05D007310 ORTHO05D002375 1.3e-14 84.3 96 45.8
ClCG09G015950 Citrullus lanatus HOM05D007310 ORTHO05D002375 3.9e-14 82.8 125 37.6
ECA234G2182 Erigeron canadensis HOM05D007310 ORTHO05D002375 8.6e-14 81.6 130 36.9
Sed0021578 Sechium edule HOM05D007310 ORTHO05D002375 1.5e-13 80.9 130 36.9
CsaV3_7G006790 Cucumis sativus L. HOM05D007310 ORTHO05D002375 2.5e-13 80.1 150 36.7
Duzib132G0922 Durio zibethinus HOM05D007310 ORTHO05D002375 4.3e-13 79.3 163 35.0
Glyma.08G070200 Glycine max HOM05D007310 ORTHO05D002375 7.3e-13 78.6 149 35.6
Actinidia28038 Actinidia chinensis HOM05D007310 ORTHO05D002375 2.8e-12 76.6 119 37.8
DCAR_021882 Daucus carota HOM05D007310 ORTHO05D002375 2.8e-12 76.6 129 31.8
Nn5g29980 Nelumbo nucifera HOM05D007310 ORTHO05D002375 3.6e-12 76.3 136 31.6
TAR376G0136 Trochodendron aralioides HOM05D007310 ORTHO05D002375 1.8e-11 73.9 162 33.3
Gorai.005G224000 Gossypium raimondii HOM05D007310 ORTHO05D002375 2.3e-11 73.6 114 36.0
HPP92_019302 Vanilla planifolia HOM05D007310 ORTHO05D002375 2.3e-11 73.6 142 31.0
MBI06_g03314_MAGBIO Magnolia biondii HOM05D007310 ORTHO05D002375 4.0e-11 72.8 121 35.5
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 3.4e-10 69.7 125 34.4
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 3.7e-09 66.2 140 31.4
TAR625G1009 Trochodendron aralioides HOM05D007310 ORTHO05D002375 6.4e-09 65.5 152 29.6
PSO700G0139 Papaver somniferum HOM05D007310 ORTHO05D002375 8.3e-09 65.1 129 29.5
CSS0048944 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 7.0e-08 62.0 65 46.2
PSO761G0559 Papaver somniferum HOM05D015253 ORTHO05D002375 1.2e-07 61.2 142 26.1
Os08g0483600 Oryza sativa ssp. japonica HOM05D026744 ORTHO05D012887 2.0e-07 60.5 118 31.4
Lj2A538G23 Lonicera japonica HOM05D004728 ORTHO05D002375 2.7e-07 60.1 100 33.0
Migut.L00163 Erythranthe guttata HOM05D004728 ORTHO05D002375 6.0e-07 58.9 148 27.7
Aqoxy476s002 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 7.8e-07 58.5 104 33.7
Aqoxy6G00703 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 7.8e-07 58.5 104 33.7
Os04g0450600 Oryza sativa ssp. japonica HOM05D021312 ORTHO05D012887 7.8e-07 58.5 122 27.9
AUR62027821 Chenopodium quinoa HOM05D059013 ORTHO05D002375 1.3e-06 57.8 110 36.4
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 1.7e-06 57.4 143 28.7
HanXRQChr17g0556311 Helianthus annuus HOM05D004728 ORTHO05D002375 2.3e-06 57.0 114 33.3
Migut.C01097 Erythranthe guttata HOM05D004728 ORTHO05D002375 3.9e-06 56.2 119 31.1
Gohir.D05G225800 Gossypium hirsutum HOM05D004728 ORTHO05D002375 6.6e-06 55.5 141 27.7


User provided reference genes

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