Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G14045 Arabidopsis thaliana HOM05D006721 ORTHO05D000476 4.1e-60 234.6 123 100.0
AL3G45710 Arabidopsis lyrata HOM05D006721 ORTHO05D000476 4.7e-56 221.1 134 89.6
CARHR104660 Cardamine hirsuta HOM05D006721 ORTHO05D000476 3.1e-55 218.4 123 92.7
Sp3g27300 Schrenkiella parvula HOM05D006721 ORTHO05D000476 4.4e-54 214.5 123 90.2
BraA03t13647Z Brassica rapa HOM05D006721 ORTHO05D000476 1.4e-52 209.5 122 89.3
BcaC01g03109 Brassica carinata HOM05D006721 ORTHO05D000476 6.0e-51 204.1 122 88.5
BolC3t17881H Brassica oleracea HOM05D006721 ORTHO05D000476 6.0e-51 204.1 122 88.5
Thhalv10023143m.g Eutrema salsugineum HOM05D006721 ORTHO05D000476 1.7e-50 202.6 122 86.9
A03p45120 Brassica napus HOM05D006721 ORTHO05D000476 8.7e-50 200.3 117 88.9
Carub.0003s2825 Capsella rubella HOM05D006721 ORTHO05D000476 1.9e-49 199.1 124 87.9
C03p55970 Brassica napus HOM05D006721 ORTHO05D000476 3.6e-48 194.9 117 88.0
Aa31LG8G12480 Aethionema arabicum HOM05D006721 ORTHO05D000476 1.9e-44 182.6 122 83.6
THA.LOC104808031 Tarenaya hassleriana HOM05D006721 ORTHO05D000476 2.3e-42 175.6 109 86.2
Manes.09G149900 Manihot esculenta HOM05D006721 ORTHO05D000476 6.4e-37 157.5 108 75.9
Eucgr.B02129 Eucalyptus grandis HOM05D006721 ORTHO05D000476 1.4e-36 156.4 108 75.0
Thecc.05G276800 Theobroma cacao HOM05D006721 ORTHO05D000476 1.9e-36 156.0 111 73.0
FvH4_6g02371 Fragaria vesca HOM05D006721 ORTHO05D000476 2.4e-36 155.6 111 74.8
FAN05G5208 Fragaria x ananassa HOM05D006721 ORTHO05D000476 2.4e-36 155.6 111 74.8
FAN14G0694 Fragaria x ananassa HOM05D004756 ORTHO05D005793 2.4e-36 155.6 111 74.8
CiPaw.07G077700 Carya illinoinensis HOM05D006721 ORTHO05D000476 4.2e-36 154.8 93 86.0
Ciclev10022930m.g Citrus clementina HOM05D006721 ORTHO05D000476 4.2e-36 154.8 113 71.7
QL01p041965 Quercus lobata HOM05D006721 ORTHO05D000476 5.5e-36 154.5 113 73.5
Potri.019G014100 Populus trichocarpa HOM05D006721 ORTHO05D000476 7.1e-36 154.1 113 72.6
PGR142G1199 Punica granatum HOM05D006721 ORTHO05D000476 1.2e-35 153.3 108 73.1
Atru.chr2.886 Acer truncatum HOM05D006721 ORTHO05D000476 1.6e-35 152.9 108 73.1
COL.COLO4_15417 Corchorus olitorius HOM05D006721 ORTHO05D000476 1.6e-35 152.9 103 74.8
Gohir.A13G168900 Gossypium hirsutum HOM05D006721 ORTHO05D000476 2.1e-35 152.5 116 69.0
Gohir.D13G174300 Gossypium hirsutum HOM05D006721 ORTHO05D000476 2.1e-35 152.5 116 69.0
Gorai.013G186500 Gossypium raimondii HOM05D006721 ORTHO05D000476 2.1e-35 152.5 116 69.0
Haze_04466 Corylus avellana HOM05D006721 ORTHO05D000476 3.5e-35 151.8 110 74.5
QL03p032184 Quercus lobata HOM05D006721 ORTHO05D000476 3.5e-35 151.8 113 72.6
QL03p032281 Quercus lobata HOM05D006721 ORTHO05D000476 3.5e-35 151.8 113 72.6
Prupe.6G347400 Prunus persica HOM05D006721 ORTHO05D000476 6.0e-35 151.0 114 72.8
TWI56G0396 Tripterygium wilfordii HOM05D006721 ORTHO05D000476 7.9e-35 150.6 109 72.5
FAN14G4094 Fragaria x ananassa HOM05D004756 ORTHO05D005793 2.3e-34 149.1 107 74.8
RcHm_v2.0_Chr3g0450141 Rosa chinensis HOM05D006721 ORTHO05D000476 2.3e-34 149.1 115 69.6
Sabra19G0016300 Salix brachista HOM05D006721 ORTHO05D000476 3.9e-34 148.3 113 69.9
Sabra19G0026800 Salix brachista HOM05D006721 ORTHO05D000476 3.9e-34 148.3 113 69.9
Glyma.03G251900 Glycine max HOM05D006721 ORTHO05D000476 5.1e-34 147.9 111 71.2
FAN02G4370 Fragaria x ananassa HOM05D006721 ORTHO05D000476 6.7e-34 147.5 108 73.1
GSVIVG01036217001 Vitis vinifera HOM05D006721 ORTHO05D000476 8.7e-34 147.1 106 72.6
Medtr7g116300 Medicago truncatula HOM05D006721 ORTHO05D000476 1.1e-33 146.7 111 71.2
TPR.G6950 Trifolium pratense HOM05D006721 ORTHO05D000476 1.5e-33 146.4 111 70.3
Lj1g0023872 Lotus japonicus HOM05D006721 ORTHO05D000476 1.9e-33 146.0 110 72.7
Dinv14631 Davidia involucrata HOM05D006721 ORTHO05D000476 2.5e-33 145.6 104 73.1
FAN05G3615 Fragaria x ananassa HOM05D004756 ORTHO05D005793 2.5e-33 145.6 111 70.3
Phvul.006G106600 Phaseolus vulgaris HOM05D006721 ORTHO05D000476 2.5e-33 145.6 111 70.3
Migut.F00814 Erythranthe guttata HOM05D006721 ORTHO05D000476 7.4e-33 144.1 102 72.5
HanXRQChr11g0322821 Helianthus annuus HOM05D006721 ORTHO05D000476 7.4e-33 144.1 102 73.5
Lsat_1_v5_gn_2_107641 Lactuca sativa HOM05D006721 ORTHO05D000476 7.4e-33 144.1 102 72.5
MD12G1244800 Malus domestica HOM05D006721 ORTHO05D000476 7.4e-33 144.1 114 71.1
Cfa006323 Carpinus fangiana HOM05D006721 ORTHO05D000476 9.6e-33 143.7 102 77.5
Lalb_Chr04g0262001 Lupinus albus HOM05D006721 ORTHO05D000476 9.6e-33 143.7 111 70.3
Sed0018278 Sechium edule HOM05D006721 ORTHO05D000476 9.6e-33 143.7 109 67.9
CsaV3_2G003760 Cucumis sativus L. HOM05D006721 ORTHO05D000476 2.8e-32 142.1 109 67.9
Cpa.g.sc162.11 Carica papaya HOM05D006721 ORTHO05D000476 3.7e-32 141.7 113 66.4
Psat3g006080 Pisum sativum HOM05D006721 ORTHO05D000476 4.8e-32 141.4 111 67.6
Aqoxy2G03596 Aquilegia oxysepala HOM05D006721 ORTHO05D000476 1.1e-31 140.2 103 69.9
Nn1g02669 Nelumbo nucifera HOM05D006721 ORTHO05D000476 1.1e-31 140.2 103 70.9
ECA238G3797 Erigeron canadensis HOM05D006721 ORTHO05D000476 1.4e-31 139.8 108 66.7
Cc02_g09090 Coffea canephora HOM05D006721 ORTHO05D000476 1.8e-31 139.4 97 73.2
Oeu058331.1 Olea europaea HOM05D006721 ORTHO05D000476 2.4e-31 139.0 103 69.9
Gorai.008G193300 Gossypium raimondii HOM05D006721 ORTHO05D000476 4.0e-31 138.3 110 66.4
Nitab4.5_0000930g0080 Nicotiana tabacum HOM05D006721 ORTHO05D000476 4.0e-31 138.3 99 72.7
Actinidia38949 Actinidia chinensis HOM05D006721 ORTHO05D000476 5.3e-31 137.9 111 64.0
CANSAT54G3036 Cannabis sativa HOM05D006721 ORTHO05D000476 5.3e-31 137.9 111 67.6
Os07g0185800 Oryza sativa ssp. japonica HOM05D006721 ORTHO05D000476 5.3e-31 137.9 95 73.7
TAR365G0041 Trochodendron aralioides HOM05D006721 ORTHO05D000476 6.9e-31 137.5 107 68.2
CSS0047325 Camellia sinensis var. sinensis HOM05D006721 ORTHO05D000476 9.0e-31 137.1 100 71.0
Hund06940 Selenicereus undatus HOM05D006721 ORTHO05D000476 9.0e-31 137.1 102 66.7
Peaxi162Scf00135g00914 Petunia axillaris HOM05D006721 ORTHO05D000476 1.2e-30 136.7 97 74.2
SGA_v2.0_scaffold90G27702 Striga asiatica HOM05D006721 ORTHO05D000476 1.5e-30 136.3 106 68.9
Dinv18276 Davidia involucrata HOM05D006721 ORTHO05D000476 2.0e-30 136.0 105 68.6
EL10Ac4g09049 Beta vulgaris HOM05D006721 ORTHO05D000476 2.6e-30 135.6 108 63.0
Actinidia34741 Actinidia chinensis HOM05D006721 ORTHO05D000476 4.5e-30 134.8 113 61.9
HPP92_000759 Vanilla planifolia HOM05D006721 ORTHO05D000476 5.8e-30 134.4 88 76.1
Sopen04g004980 Solanum pennellii HOM05D006721 ORTHO05D000476 7.6e-30 134.0 100 69.0
PGSC0003DMG400025428 Solanum tuberosum HOM05D006721 ORTHO05D000476 7.6e-30 134.0 100 69.0
CAN.G186.72 Capsicum annuum HOM05D006721 ORTHO05D000476 1.7e-29 132.9 100 70.0
AUR62001066 Chenopodium quinoa HOM05D006721 ORTHO05D000476 1.7e-29 132.9 108 62.0
Gohir.D12G180151 Gossypium hirsutum HOM05D006721 ORTHO05D000476 1.7e-29 132.9 110 65.5
Zm00001eb301780 Zea mays HOM05D006721 ORTHO05D000476 1.7e-29 132.9 89 71.9
Nitab4.5_0002651g0060 Nicotiana tabacum HOM05D006721 ORTHO05D000476 2.9e-29 132.1 112 64.3
MSTRG.9005 Avicennia marina HOM05D006721 ORTHO05D000476 3.8e-29 131.7 101 68.3
Ah.04g163750 Amaranthus hybridus HOM05D006721 ORTHO05D000476 6.5e-29 131.0 106 67.9
vmacro10349 Vaccinium macrocarpon HOM05D006721 ORTHO05D000476 1.1e-28 130.2 112 60.7
ATR0665G282 Amborella trichopoda HOM05D006721 ORTHO05D000476 3.2e-28 128.6 108 63.9
AUR62004887 Chenopodium quinoa HOM05D006721 ORTHO05D000476 3.2e-28 128.6 108 61.1
MBI19_g37090_MAGBIO Magnolia biondii HOM05D006721 ORTHO05D000476 3.2e-28 128.6 109 66.1
PSO210G7245 Papaver somniferum HOM05D006721 ORTHO05D000476 5.5e-28 127.9 109 63.3
Ca_09468_v3 Cicer arietinum L. HOM05D006721 ORTHO05D000476 7.1e-28 127.5 113 64.6
PSO832G0589 Papaver somniferum HOM05D006721 ORTHO05D000476 7.1e-28 127.5 109 63.3
CDE06G1546 Ceratophyllum demersum HOM05D006721 ORTHO05D000476 1.2e-27 126.7 103 62.1
Sc15g0002500 Simmondsia chinensis HOM05D006721 ORTHO05D000476 1.6e-27 126.3 82 75.6
GSVIVG01014622001 Vitis vinifera HOM05D006721 ORTHO05D000476 2.1e-27 125.9 81 77.8
GSVIVG01015127001 Vitis vinifera HOM05D006721 ORTHO05D000476 6.0e-27 124.4 82 78.0
Duzib128G0372 Durio zibethinus HOM05D006721 ORTHO05D000476 3.7e-24 115.2 114 59.6
BraA09t38027Z Brassica rapa HOM05D006721 ORTHO05D000476 4.8e-24 114.8 82 75.6
BraA10t43135Z Brassica rapa HOM05D006721 ORTHO05D000476 4.8e-24 114.8 82 75.6
Rhsim09G0138600 Rhododendron simsii HOM05D006721 ORTHO05D000476 1.8e-23 112.8 149 47.0
BraA06t26268Z Brassica rapa HOM05D006721 ORTHO05D000476 5.3e-23 111.3 83 72.3
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 6.9e-23 110.9 103 60.2
A07p07050 Brassica napus HOM05D006721 ORTHO05D000476 1.2e-22 110.2 81 74.1
SMO367G0192 Selaginella moellendorffii HOM05D001348 ORTHO05D002788 6.5e-21 104.4 80 65.0
Mapoly0013s0055 Marchantia polymorpha HOM05D006721 ORTHO05D000476 5.5e-20 101.3 82 58.5
A09p24350 Brassica napus HOM05D006721 ORTHO05D000476 9.3e-20 100.5 58 87.9
A01p30750 Brassica napus HOM05D001035 ORTHO05D000476 4.6e-19 98.2 58 86.2
C07p11900 Brassica napus HOM05D006721 ORTHO05D000476 1.4e-18 96.7 77 74.0
BcaB06g29605 Brassica carinata HOM05D001035 ORTHO05D021752 5.1e-18 94.7 58 81.0
MELO3C004419.2 Cucumis melo HOM05D006721 ORTHO05D000476 5.1e-18 94.7 65 69.2
Pp3c7_11510 Physcomitrium patens HOM05D006721 ORTHO05D000476 6.7e-18 94.4 81 53.1
BolC7t41661H Brassica oleracea HOM05D006721 ORTHO05D000476 1.1e-17 93.6 79 70.9
arahy.Tifrunner.gnm1.ann1.DA1MAK Arachis hypogaea HOM05D006721 ORTHO05D000476 3.3e-17 92.0 83 60.2
arahy.Tifrunner.gnm1.ann1.P0L55B Arachis hypogaea HOM05D006721 ORTHO05D000476 3.3e-17 92.0 83 60.2
ClCG02G016980 Citrullus lanatus HOM05D006721 ORTHO05D000476 2.2e-16 89.4 58 74.1
MCO10G233 Micromonas commoda HOM05D006721 ORTHO05D000476 3.1e-15 85.5 79 57.0
CBR_g51472 Chara braunii HOM05D006721 ORTHO05D000476 1.2e-14 83.6 88 45.5
BcaB04g18782 Brassica carinata HOM05D006721 ORTHO05D000476 2.6e-14 82.4 67 65.7
FAN09G4219 Fragaria x ananassa HOM05D006721 ORTHO05D000476 3.4e-14 82.0 82 54.9
Zm00001eb112450 Zea mays HOM05D006721 ORTHO05D000476 1.0e-13 80.5 57 68.4
PRCOL_00003504 Prasinoderma coloniale HOM05D006721 ORTHO05D000476 2.5e-12 75.9 62 58.1
A05p09770 Brassica napus HOM05D006721 ORTHO05D000476 7.2e-12 74.3 49 79.6
Cre02.g105950 Chlamydomonas reinhardtii HOM05D006721 ORTHO05D000476 1.6e-11 73.2 84 46.4
BolC5t30890H Brassica oleracea HOM05D000263 ORTHO05D028311 7.9e-11 70.9 41 85.4
C08p15110 Brassica napus HOM05D000263 ORTHO05D028311 1.0e-10 70.5 41 85.4
BolC8t49141H Brassica oleracea HOM05D000263 ORTHO05D028311 1.0e-10 70.5 41 85.4
DCAR_030976 Daucus carota HOM05D006721 ORTHO05D000476 9.7e-09 63.9 60 58.3
BcaC06g35701 Brassica carinata HOM05D000809 ORTHO05D001196 2.2e-08 62.8 35 88.6
SHI31376 Sapria himalayana HOM05D006721 ORTHO05D000476 2.4e-07 59.3 46 60.9
A09p05680 Brassica napus HOM05D006721 ORTHO05D000476 7.7e-06 54.3 28 92.9


User provided reference genes

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