Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G13760 Arabidopsis thaliana HOM05D007592 ORTHO05D004645 1.5e-94 349.7 210 100.0
AT1G24380 Arabidopsis thaliana HOM05D007592 ORTHO05D004645 9.2e-84 313.9 238 85.3
AT4G10230 Arabidopsis thaliana HOM05D007592 ORTHO05D004645 2.7e-83 312.4 238 84.5
BraA09t38299Z Brassica rapa HOM05D007592 ORTHO05D004645 1.4e-55 220.3 237 56.1
C06p21250 Brassica napus HOM05D007592 ORTHO05D004645 3.1e-55 219.2 237 55.7
BolC6t37310H Brassica oleracea HOM05D007592 ORTHO05D004645 3.1e-55 219.2 237 55.7
BcaNung00662 Brassica carinata HOM05D007592 ORTHO05D004645 8.4e-45 184.5 214 54.2
Thhalv10019741m.g Eutrema salsugineum HOM05D007592 ORTHO05D004645 3.2e-28 129.4 184 56.5
C01p21230 Brassica napus HOM05D007592 ORTHO05D004645 1.6e-27 127.1 135 64.4
BolC7t41889H Brassica oleracea HOM05D007592 ORTHO05D004645 3.5e-27 125.9 166 60.2
CANSAT35G0055 Cannabis sativa HOM05D007592 ORTHO05D004645 1.1e-25 120.9 164 47.0
CARHR117400 Cardamine hirsuta HOM05D007592 ORTHO05D004645 6.3e-24 115.2 88 70.5
BolC1t03512H Brassica oleracea HOM05D007592 ORTHO05D014827 1.5e-22 110.5 136 50.7
CANSAT64G2577 Cannabis sativa HOM05D007592 ORTHO05D004645 1.1e-20 104.4 180 43.3
Ciclev10023655m.g Citrus clementina HOM05D007592 ORTHO05D004645 1.9e-20 103.6 185 37.3
Manes.13G090650 Manihot esculenta HOM05D007592 ORTHO05D004645 3.2e-20 102.8 166 39.8
AL8G44460 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 1.2e-19 100.9 176 38.6
Thhalv10002965m.g Eutrema salsugineum HOM05D007592 ORTHO05D004645 1.2e-19 100.9 170 44.1
Oeu029633.1 Olea europaea HOM05D007592 ORTHO05D004645 1.2e-19 100.9 192 37.5
Ciclev10016612m.g Citrus clementina HOM05D007592 ORTHO05D004645 2.7e-19 99.8 184 35.9
AL6G36070 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 4.6e-19 99.0 176 38.1
Atru.chr10.1040 Acer truncatum HOM05D007592 ORTHO05D004645 7.9e-19 98.2 182 35.2
Ciclev10023446m.g Citrus clementina HOM05D007592 ORTHO05D004645 1.4e-18 97.4 179 37.4
AL2G23940 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 1.8e-18 97.1 173 37.0
Manes.04G041320 Manihot esculenta HOM05D007592 ORTHO05D004645 2.3e-18 96.7 169 36.7
C01p35510 Brassica napus HOM05D000760 ORTHO05D014827 3.0e-18 96.3 152 44.1
Thhalv10022202m.g Eutrema salsugineum HOM05D007592 ORTHO05D004645 3.9e-18 95.9 176 51.7
Atru.chr12.1217 Acer truncatum HOM05D007592 ORTHO05D004645 6.7e-18 95.1 189 35.4
Manes.01G069750 Manihot esculenta HOM05D007592 ORTHO05D004645 8.8e-18 94.7 178 35.4
Manes.07G048750 Manihot esculenta HOM05D007592 ORTHO05D004645 1.1e-17 94.4 188 34.6
Manes.13G094101 Manihot esculenta HOM05D007592 ORTHO05D004645 9.7e-17 91.3 156 39.7
Ciclev10027215m.g Citrus clementina HOM05D007592 ORTHO05D004645 3.7e-16 89.4 171 35.7
CARHR103730 Cardamine hirsuta HOM05D007592 ORTHO05D004645 1.4e-15 87.4 186 33.9
Atru.chr6.1370 Acer truncatum HOM05D007592 ORTHO05D004645 2.4e-15 86.7 168 36.3
CARHR029530 Cardamine hirsuta HOM05D007592 ORTHO05D004645 4.1e-15 85.9 179 33.5
DCAR_018612 Daucus carota HOM05D007592 ORTHO05D004645 4.1e-15 85.9 194 33.5
Manes.09G090928 Manihot esculenta HOM05D007592 ORTHO05D004645 4.1e-15 85.9 169 33.1
CANSAT54G1431 Cannabis sativa HOM05D007592 ORTHO05D004645 9.1e-15 84.7 186 46.8
DCAR_001490 Daucus carota HOM05D007592 ORTHO05D004645 3.4e-14 82.8 194 33.0
C04p29390 Brassica napus HOM05D007592 ORTHO05D004645 7.7e-14 81.6 97 48.5
CARHR258700 Cardamine hirsuta HOM05D007592 ORTHO05D004645 2.2e-13 80.1 179 33.0
FAN05G2464 Fragaria x ananassa HOM05D007743 ORTHO05D004645 6.5e-13 78.6 191 33.5
FAN08G2536 Fragaria x ananassa HOM05D007743 ORTHO05D004645 6.5e-13 78.6 191 33.5
FAN08G2971 Fragaria x ananassa HOM05D007743 ORTHO05D004645 6.5e-13 78.6 191 33.5
FAN09G0033 Fragaria x ananassa HOM05D007743 ORTHO05D004645 6.5e-13 78.6 191 33.5
FAN18G2940 Fragaria x ananassa HOM05D007743 ORTHO05D004645 6.5e-13 78.6 191 33.5
FAN18G3916 Fragaria x ananassa HOM05D007743 ORTHO05D004645 6.5e-13 78.6 191 33.5
FAN26G1586 Fragaria x ananassa HOM05D007743 ORTHO05D004645 6.5e-13 78.6 191 33.5
FAN09G4280 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.1e-12 77.8 191 33.5
FAN26G1874 Fragaria x ananassa HOM05D007743 ORTHO05D004645 3.2e-12 76.3 191 33.0
Oeu023351.1 Olea europaea HOM05D007592 ORTHO05D004645 3.2e-12 76.3 174 32.2
Atru.chr11.101 Acer truncatum HOM05D007592 ORTHO05D004645 5.5e-12 75.5 164 34.1
Atru.chr13.1766 Acer truncatum HOM05D007592 ORTHO05D004645 7.2e-12 75.1 177 32.8
AT1G66235 Arabidopsis thaliana HOM05D007592 ORTHO05D004645 9.4e-12 74.7 170 32.4
Manes.16G106550 Manihot esculenta HOM05D007592 ORTHO05D004645 9.4e-12 74.7 132 35.6
Atru.chr8.1611 Acer truncatum HOM05D007592 ORTHO05D004645 1.2e-11 74.3 147 33.3
Atru.chr3.1639 Acer truncatum HOM05D007592 ORTHO05D004645 2.7e-11 73.2 101 42.6
FvH4_2g02401 Fragaria vesca HOM05D007743 ORTHO05D010219 6.1e-11 72.0 182 33.5
FAN09G3614 Fragaria x ananassa HOM05D007743 ORTHO05D004645 7.9e-11 71.6 185 30.3
Rhsim08G0115200 Rhododendron simsii HOM05D007743 ORTHO05D004645 1.0e-10 71.2 206 29.6
Atru.chr4.1791 Acer truncatum HOM05D007592 ORTHO05D004645 1.8e-10 70.5 107 41.1
Atru.chr8.1335 Acer truncatum HOM05D007592 ORTHO05D004645 5.1e-10 68.9 129 38.8
Atru.chr10.191 Acer truncatum HOM05D007592 ORTHO05D004645 8.8e-10 68.2 99 41.4
Manes.12G071232 Manihot esculenta HOM05D007592 ORTHO05D004645 1.1e-09 67.8 118 35.6
CANSAT01G0035 Cannabis sativa HOM05D007592 ORTHO05D004645 2.0e-09 67.0 77 49.4
Manes.03G086206 Manihot esculenta HOM05D007592 ORTHO05D004645 3.3e-09 66.2 118 34.7
Migut.A00242 Erythranthe guttata HOM05D007592 ORTHO05D004645 5.7e-09 65.5 184 29.9
Oeu019651.1 Olea europaea HOM05D007592 ORTHO05D004645 5.7e-09 65.5 142 31.7
Ciclev10033648m.g Citrus clementina HOM05D007592 ORTHO05D004645 7.4e-09 65.1 125 36.0
SalBow3G0485 Salvia bowleyana HOM05D020195 ORTHO05D023117 7.4e-09 65.1 149 32.9
AL9U10800 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 1.3e-08 64.3 78 48.7
RcHm_v2.0_Chr6g0296991 Rosa chinensis HOM05D007743 ORTHO05D004645 1.7e-08 63.9 181 26.5
CSS0032344 Camellia sinensis var. sinensis HOM05D007743 ORTHO05D004645 2.8e-08 63.2 199 27.6
Atru.chr5.2435 Acer truncatum HOM05D007743 ORTHO05D004645 3.7e-08 62.8 184 31.5
Carub.0004s0678 Capsella rubella HOM05D007592 ORTHO05D004645 8.2e-08 61.6 186 29.0
Atru.chr8.363 Acer truncatum HOM05D007592 ORTHO05D004645 1.4e-07 60.8 123 35.8
FAN18G0507 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.4e-07 60.8 128 35.2
Atru.chr6.863 Acer truncatum HOM05D007592 ORTHO05D004645 3.1e-07 59.7 114 34.2
CSS0013406 Camellia sinensis var. sinensis HOM05D007743 ORTHO05D004645 7.0e-07 58.5 199 26.6
Atru.chr3.1033 Acer truncatum HOM05D007592 ORTHO05D004645 9.1e-07 58.2 105 35.2
Manes.15G083266 Manihot esculenta HOM05D007592 ORTHO05D004645 9.1e-07 58.2 103 35.0
FAN24G2509 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.2e-06 57.8 127 29.9
FvH4_4g12912 Fragaria vesca HOM05D007743 ORTHO05D004645 2.0e-06 57.0 123 30.9
FAN17G0227 Fragaria x ananassa HOM05D007743 ORTHO05D004645 2.6e-06 56.6 105 34.3
C06p19270 Brassica napus HOM05D007592 ORTHO05D033492 3.5e-06 56.2 55 56.4


User provided reference genes

Program Settings