Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G13295 Arabidopsis thaliana HOM05D011315 ORTHO05D013409 2.7e-61 238.4 114 100.0
Thhalv10001126m.g Eutrema salsugineum HOM05D011315 ORTHO05D013409 1.1e-33 146.7 114 62.3
A01p31390 Brassica napus HOM05D011315 ORTHO05D013409 1.5e-24 116.3 117 49.6
AL3G38030 Arabidopsis lyrata HOM05D008307 ORTHO05D010374 4.4e-24 114.8 112 50.0
C01p39980 Brassica napus HOM05D011315 ORTHO05D013409 4.4e-24 114.8 120 48.3
Thhalv10022111m.g Eutrema salsugineum HOM05D011315 ORTHO05D013409 7.6e-24 114.0 98 48.0
CARHR100000 Cardamine hirsuta HOM05D011315 ORTHO05D013409 2.2e-23 112.5 103 48.5
BraA01t03264Z Brassica rapa HOM05D011315 ORTHO05D013409 4.9e-23 111.3 117 48.7
Carub.0003s2393 Capsella rubella HOM05D011315 ORTHO05D013409 6.4e-23 110.9 110 47.3
Carub.0003s2392 Capsella rubella HOM05D011315 ORTHO05D013409 4.2e-22 108.2 101 50.5
Aa31sc250G70 Aethionema arabicum HOM05D011315 ORTHO05D013409 7.1e-22 107.5 118 45.8
BolC1t03953H Brassica oleracea HOM05D011315 ORTHO05D013409 1.6e-18 96.3 91 49.5
Thhalv10022046m.g Eutrema salsugineum HOM05D011315 ORTHO05D013409 4.8e-18 94.7 114 40.4
Aa31LG8G10210 Aethionema arabicum HOM05D011315 ORTHO05D013409 8.1e-18 94.0 114 42.1
Thhalv10022390m.g Eutrema salsugineum HOM05D011315 ORTHO05D013409 9.9e-16 87.0 70 61.4
AL3G45240 Arabidopsis lyrata HOM05D011315 ORTHO05D013409 6.0e-13 77.8 37 91.9
AL3G38390 Arabidopsis lyrata HOM05D011315 ORTHO05D013409 7.9e-13 77.4 48 68.8
Thhalv10022217m.g Eutrema salsugineum HOM05D011315 ORTHO05D013409 8.7e-12 73.9 61 49.2
AL8G32240 Arabidopsis lyrata HOM05D002739 ORTHO05D002877 1.8e-09 66.2 73 41.1
CARHR270120 Cardamine hirsuta HOM05D002739 ORTHO05D002877 4.0e-09 65.1 59 49.2
AT1G32280 Arabidopsis thaliana HOM05D002739 ORTHO05D002877 5.3e-09 64.7 71 39.4
A10p13840 Brassica napus HOM05D002739 ORTHO05D002877 1.2e-08 63.5 71 39.4
BraA10t43477Z Brassica rapa HOM05D002739 ORTHO05D002877 1.2e-08 63.5 71 39.4
Carub.0001s3061 Capsella rubella HOM05D002739 ORTHO05D002877 1.2e-08 63.5 71 39.4
AL1G46440 Arabidopsis lyrata HOM05D002739 ORTHO05D002877 2.6e-08 62.4 71 38.0
AT5G56480 Arabidopsis thaliana HOM05D002739 ORTHO05D002877 3.4e-08 62.0 107 32.7
Duzib168G0958 Durio zibethinus HOM05D002739 ORTHO05D002877 1.3e-07 60.1 70 37.1
Cpa.g.sc84.11 Carica papaya HOM05D002739 ORTHO05D002877 1.7e-07 59.7 93 34.4
BolC9t57655H Brassica oleracea HOM05D002739 ORTHO05D002877 2.9e-07 58.9 71 36.6
BcaB05g22276 Brassica carinata HOM05D002739 ORTHO05D002877 1.4e-06 56.6 71 33.8
QL04p013260 Quercus lobata HOM05D002739 ORTHO05D002877 1.4e-06 56.6 70 34.3
TWI74G0698 Tripterygium wilfordii HOM05D002739 ORTHO05D002877 5.5e-06 54.7 70 32.9


User provided reference genes

Program Settings