Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G11910 Arabidopsis thaliana HOM05D010884 ORTHO05D012938 1.3e-40 170.2 121 100.0
Carub.0003s2774 Capsella rubella HOM05D010884 ORTHO05D012938 4.3e-31 138.7 123 80.5
AL3G44860 Arabidopsis lyrata HOM05D010884 ORTHO05D012938 5.6e-31 138.3 121 86.8
BolC3t17853H Brassica oleracea HOM05D010884 ORTHO05D012938 3.2e-26 122.5 124 77.4
BcaC01g03133 Brassica carinata HOM05D010884 ORTHO05D012938 7.0e-26 121.3 124 76.6
C03p55730 Brassica napus HOM05D010884 ORTHO05D012938 7.0e-26 121.3 124 76.6
BcaB08g34521 Brassica carinata HOM05D010884 ORTHO05D012938 3.5e-25 119.0 124 76.6
CARHR105010 Cardamine hirsuta HOM05D010884 ORTHO05D012938 6.6e-24 114.8 74 82.4
A03p44850 Brassica napus HOM05D010884 ORTHO05D012938 2.1e-22 109.8 124 73.4
BraA03t13621Z Brassica rapa HOM05D010884 ORTHO05D012938 2.1e-22 109.8 124 73.4
BraA09t36675Z Brassica rapa HOM05D010884 ORTHO05D012938 3.1e-21 105.9 74 77.0
A09p10300 Brassica napus HOM05D010884 ORTHO05D012938 6.8e-21 104.8 74 75.7
C09p12240 Brassica napus HOM05D010884 ORTHO05D012938 2.0e-20 103.2 74 74.3
BcaC04g23090 Brassica carinata HOM05D010884 ORTHO05D012938 1.7e-19 100.1 72 75.0
BolC9t54118H Brassica oleracea HOM05D010884 ORTHO05D012938 1.7e-19 100.1 72 75.0
Aa31sc200G30 Aethionema arabicum HOM05D010884 ORTHO05D012938 8.9e-13 77.8 121 62.0
THA.LOC104826562 Tarenaya hassleriana HOM05D010884 ORTHO05D012938 1.7e-11 73.6 131 54.2
THA.LOC104808953 Tarenaya hassleriana HOM05D010884 ORTHO05D012938 6.4e-11 71.6 78 51.3
THA.LOC104815296 Tarenaya hassleriana HOM05D010884 ORTHO05D007516 1.7e-08 63.5 75 52.0


User provided reference genes

Program Settings