Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G07768 Arabidopsis thaliana HOM05D003783 ORTHO05D004568 4.0e-84 314.7 155 100.0
BraSC48t46351Z Brassica rapa HOM05D003783 ORTHO05D004568 6.6e-71 270.8 155 87.1
PGR028G0013 Punica granatum HOM05D003783 ORTHO05D004568 9.2e-65 250.4 148 87.8
AL3G44470 Arabidopsis lyrata HOM05D003783 ORTHO05D004568 1.6e-64 249.6 124 100.0
Sp3g25860 Schrenkiella parvula HOM05D003783 ORTHO05D004568 2.7e-64 248.8 124 99.2
BraSC48t46298Z Brassica rapa HOM05D003783 ORTHO05D004568 7.8e-64 247.3 124 99.2
BraSC48t46316Z Brassica rapa HOM05D003783 ORTHO05D004568 7.8e-64 247.3 124 99.2
CARHR283230 Cardamine hirsuta HOM05D003783 ORTHO05D004568 1.3e-63 246.5 124 99.2
BraSC177t45761Z Brassica rapa HOM05D003783 ORTHO05D004568 3.0e-63 245.4 124 98.4
SabraMtG0000900 Salix brachista HOM05D003783 ORTHO05D004568 6.2e-61 237.7 124 96.8
Gorai.001G160200 Gossypium raimondii HOM05D003783 ORTHO05D004568 3.1e-60 235.3 124 96.8
DCAR_031805 Daucus carota HOM05D003783 ORTHO05D004568 6.8e-60 234.2 124 96.0
DCAR_032429 Daucus carota HOM05D003783 ORTHO05D004568 6.8e-60 234.2 124 96.0
Lj2P1232T100 Lonicera japonica HOM05D003783 ORTHO05D004568 1.5e-59 233.0 124 95.2
HanXRQChr04g0109071 Helianthus annuus HOM05D003783 ORTHO05D004568 2.0e-59 232.6 120 96.7
HanXRQChr08g0236011 Helianthus annuus HOM05D003783 ORTHO05D004568 2.0e-59 232.6 120 96.7
HanXRQChr14g0434351 Helianthus annuus HOM05D003783 ORTHO05D004568 2.0e-59 232.6 120 96.7
HanXRQMTg0579571 Helianthus annuus HOM05D003783 ORTHO05D004568 2.0e-59 232.6 120 96.7
RcHm_v2.0_Chr6g0258021 Rosa chinensis HOM05D003783 ORTHO05D004568 2.0e-59 232.6 124 95.2
RcHm_v2.0_MTg0498851 Rosa chinensis HOM05D003783 ORTHO05D004568 2.0e-59 232.6 124 95.2
Nn1g09973 Nelumbo nucifera HOM05D003783 ORTHO05D004568 2.6e-59 232.3 134 89.6
RhsimMtG0005400 Rhododendron simsii HOM05D003783 ORTHO05D004568 5.8e-59 231.1 124 94.4
Nn1g10045 Nelumbo nucifera HOM05D003783 ORTHO05D004568 9.9e-59 230.3 124 95.2
Nn1g10116 Nelumbo nucifera HOM05D003783 ORTHO05D004568 9.9e-59 230.3 124 95.2
Lsat_1_v5_gn_4_139080 Lactuca sativa HOM05D003783 ORTHO05D004568 1.7e-58 229.6 120 95.8
HanXRQChr01g0013391 Helianthus annuus HOM05D003783 ORTHO05D004568 2.2e-58 229.2 120 95.0
LjContig00315g0021149 Lotus japonicus HOM05D003783 ORTHO05D004568 3.7e-58 228.4 124 94.4
LjContig00439g0010231 Lotus japonicus HOM05D003783 ORTHO05D004568 3.7e-58 228.4 124 94.4
HanXRQChr01g0003471 Helianthus annuus HOM05D003783 ORTHO05D004568 4.9e-58 228.0 120 93.3
Sc11g0004390 Simmondsia chinensis HOM05D003783 ORTHO05D004568 6.4e-58 227.6 124 94.4
Psat4g179160 Pisum sativum HOM05D003783 ORTHO05D004568 8.3e-58 227.3 123 94.3
MBI05_g05347_MAGBIO Magnolia biondii HOM05D003783 ORTHO05D004568 1.1e-57 226.9 123 94.3
Eucgr.C03075 Eucalyptus grandis HOM05D003783 ORTHO05D004568 2.4e-57 225.7 124 93.5
Lsat_1_v5_gn_5_16100 Lactuca sativa HOM05D003783 ORTHO05D004568 3.2e-57 225.3 119 94.1
Lalb_Chr00c29g0408271 Lupinus albus HOM05D003783 ORTHO05D004568 2.1e-56 222.6 124 92.7
HanXRQChr09g0246391 Helianthus annuus HOM05D003783 ORTHO05D004568 2.7e-56 222.2 119 93.3
Nn3g20873 Nelumbo nucifera HOM05D003783 ORTHO05D004568 6.0e-56 221.1 124 91.1
Solyc00g049210.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 2.3e-55 219.2 114 98.2
Solyc00g500249.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 2.3e-55 219.2 114 98.2
Solyc00g500348.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 2.3e-55 219.2 114 98.2
Aqoxy163s002 Aquilegia oxysepala HOM05D003783 ORTHO05D004568 3.9e-55 218.4 124 91.9
Psat6g195120 Pisum sativum HOM05D003783 ORTHO05D004568 6.6e-55 217.6 123 91.1
Ah.10g028070 Amaranthus hybridus HOM05D003783 ORTHO05D004568 7.3e-54 214.2 120 92.5
Ah.01g011790 Amaranthus hybridus HOM05D003783 ORTHO05D004568 1.2e-53 213.4 120 91.7
CANSAT16G0001 Cannabis sativa HOM05D003783 ORTHO05D004568 1.2e-53 213.4 124 89.5
Medtr0212s0020 Medicago truncatula HOM05D003783 ORTHO05D004568 2.1e-53 212.6 115 94.8
BolC1t03452H Brassica oleracea HOM05D003783 ORTHO05D004568 2.8e-53 212.2 128 85.9
Zm00001eb434740 Zea mays HOM05D003783 ORTHO05D004568 4.7e-53 211.5 123 88.6
Zm00001eb436360 Zea mays HOM05D003783 ORTHO05D004568 4.7e-53 211.5 123 88.6
Zm00001eb437010 Zea mays HOM05D003783 ORTHO05D004568 4.7e-53 211.5 123 88.6
Zm00001eb438050 Zea mays HOM05D003783 ORTHO05D004568 4.7e-53 211.5 123 88.6
Zm00001eb438170 Zea mays HOM05D003783 ORTHO05D004568 4.7e-53 211.5 123 88.6
Zm00001eb438820 Zea mays HOM05D003783 ORTHO05D004568 4.7e-53 211.5 123 88.6
Solyc11g063630.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 5.2e-52 208.0 114 93.9
ClCG09G015160 Citrullus lanatus HOM05D003783 ORTHO05D004568 1.7e-50 203.0 110 94.5
CDE02G1256 Ceratophyllum demersum HOM05D003783 ORTHO05D004568 3.2e-49 198.7 120 85.8
GSVIVG01006218001 Vitis vinifera HOM05D003783 ORTHO05D004568 2.7e-48 195.7 124 83.1
CsaV3_UNG210090 Cucumis sativus L. HOM05D003783 ORTHO05D004568 4.6e-48 194.9 111 89.2
Nitab4.5_0010936g0010 Nicotiana tabacum HOM05D003783 ORTHO05D004568 6.0e-48 194.5 123 84.6
GSVIVG01004964001 Vitis vinifera HOM05D003783 ORTHO05D004568 6.6e-47 191.0 124 81.5
arahy.Tifrunner.gnm1.ann1.WX3135 Arachis hypogaea HOM05D003783 ORTHO05D004568 1.5e-46 189.9 112 88.4
Gorai.013G137500 Gossypium raimondii HOM05D003783 ORTHO05D004568 6.2e-45 184.5 106 89.6
C01p34860 Brassica napus HOM05D003783 ORTHO05D004568 1.4e-44 183.3 92 97.8
Lsat_1_v5_gn_7_99780 Lactuca sativa HOM05D003783 ORTHO05D004568 2.4e-44 182.6 112 83.9
BraSC54t46361Z Brassica rapa HOM05D003783 ORTHO05D004568 4.0e-44 181.8 112 82.1
CAN.G1439.8 Capsicum annuum HOM05D003783 ORTHO05D004568 4.0e-44 181.8 133 69.9
Lsat_1_v5_gn_7_67781 Lactuca sativa HOM05D003783 ORTHO05D004568 6.9e-44 181.0 98 91.8
BcaC09g49589 Brassica carinata HOM05D003783 ORTHO05D004568 1.2e-43 180.3 88 100.0
MD14G1092300 Malus domestica HOM05D003783 ORTHO05D004568 7.6e-43 177.6 94 95.7
HanXRQChr11g0334181 Helianthus annuus HOM05D003783 ORTHO05D004568 2.2e-42 176.0 121 74.4
HanXRQChr17g0544011 Helianthus annuus HOM05D003783 ORTHO05D004568 2.2e-42 176.0 121 74.4
ATR1173G003 Amborella trichopoda HOM05D003783 ORTHO05D004568 2.9e-42 175.6 120 76.7
C01p34760 Brassica napus HOM05D003783 ORTHO05D004568 6.4e-42 174.5 92 93.5
SGA_v2.0_scaffold245G44749 Striga asiatica HOM05D003783 ORTHO05D004568 8.4e-42 174.1 120 77.5
ECA039G0028 Erigeron canadensis HOM05D003783 ORTHO05D004568 1.9e-41 172.9 103 84.5
BolC1t03443H Brassica oleracea HOM05D003783 ORTHO05D004568 5.4e-41 171.4 91 92.3
CAN.G497.18 Capsicum annuum HOM05D003783 ORTHO05D004568 1.9e-38 162.9 88 93.2
HanXRQChr01g0029691 Helianthus annuus HOM05D003783 ORTHO05D004568 1.4e-36 156.8 80 95.0
PSO675G6716 Papaver somniferum HOM05D003783 ORTHO05D004568 4.0e-36 155.2 114 73.7
PSO782G0649 Papaver somniferum HOM05D003783 ORTHO05D004568 4.0e-36 155.2 114 72.8
PSO135G0232 Papaver somniferum HOM05D003783 ORTHO05D004568 1.2e-35 153.7 113 74.3
BraSC48t46228Z Brassica rapa HOM05D003783 ORTHO05D004568 8.1e-29 131.0 64 98.4
Ciclev10003580m.g Citrus clementina HOM05D003783 ORTHO05D004568 1.1e-28 130.6 96 69.8
SEGI_30299 Sequoiadendron giganteum HOM05D003783 ORTHO05D004568 5.5e-25 118.2 102 63.7
BolSC28t60306H Brassica oleracea HOM05D003783 ORTHO05D004568 1.9e-22 109.8 88 69.3
BolSC28t60363H Brassica oleracea HOM05D003783 ORTHO05D004568 1.9e-22 109.8 88 69.3
AUR62042333 Chenopodium quinoa HOM05D003783 ORTHO05D004568 3.1e-20 102.4 89 67.4
AUR62033936 Chenopodium quinoa HOM05D003783 ORTHO05D004568 9.0e-20 100.9 88 67.0
Peaxi162Scf02040g00001 Petunia axillaris HOM05D003783 ORTHO05D004568 1.1e-17 94.0 68 72.1
Lalb_Chr11g0068271 Lupinus albus HOM05D003783 ORTHO05D004568 1.6e-16 90.1 66 71.2
Dinv06713 Davidia involucrata HOM05D003783 ORTHO05D004568 1.3e-15 87.0 46 91.3
TPR.G22134 Trifolium pratense HOM05D003783 ORTHO05D004568 1.8e-15 86.7 45 93.3
Aqoxy1G02245 Aquilegia oxysepala HOM05D003783 ORTHO05D004568 1.5e-14 83.6 52 88.5
Nitab4.5_0002589g0080 Nicotiana tabacum HOM05D003783 ORTHO05D004568 1.5e-14 83.6 49 85.7
CAN.G134.19 Capsicum annuum HOM05D003783 ORTHO05D004568 5.7e-14 81.6 57 77.2
Nitab4.5_0000592g0140 Nicotiana tabacum HOM05D003783 ORTHO05D004568 2.0e-11 73.2 66 59.1
Solyc04g049870.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 5.9e-11 71.6 97 47.4
Nitab4.5_0000128g0160 Nicotiana tabacum HOM05D003783 ORTHO05D004568 8.5e-10 67.8 33 97.0
Solyc03g013380.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 4.2e-09 65.5 45 75.6
Nitab4.5_0011099g0020 Nicotiana tabacum HOM05D003783 ORTHO05D004568 5.5e-09 65.1 36 88.9
Solyc08g029270.2 Solanum lycopersicum HOM05D003783 ORTHO05D004568 5.5e-09 65.1 39 76.9


User provided reference genes

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