Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G07708 Arabidopsis thaliana HOM05D015026 ORTHO05D015810 1.6e-76 289.3 142 100.0
ATMG00500 Arabidopsis thaliana HOM05D015026 ORTHO05D015810 1.6e-76 289.3 142 100.0
BcaC09g49596 Brassica carinata HOM05D015026 ORTHO05D015810 4.1e-51 204.9 111 93.7
BraSC48t46308Z Brassica rapa HOM05D015026 ORTHO05D015810 2.7e-39 165.6 86 97.7
BolC1t03436H Brassica oleracea HOM05D015026 ORTHO05D015810 4.4e-37 158.3 80 97.5
Aa31csc553G40 Aethionema arabicum HOM05D015026 ORTHO05D015810 8.2e-36 154.1 96 83.3
Thhalv10029241m.g Eutrema salsugineum HOM05D015026 ORTHO05D015810 4.1e-35 151.8 80 96.2
BraSC159t45717Z Brassica rapa HOM05D007924 ORTHO05D010328 2.4e-27 125.9 82 82.9
C01p34680 Brassica napus HOM05D007924 ORTHO05D010328 6.5e-25 117.9 61 95.1
BraSC54t46355Z Brassica rapa HOM05D015026 ORTHO05D011743 1.5e-24 116.7 76 82.9
BolSC28t60326H Brassica oleracea HOM05D007924 ORTHO05D011743 5.5e-24 114.8 75 82.7
BolSC28t60429H Brassica oleracea HOM05D015026 ORTHO05D015810 1.4e-14 83.6 46 95.7
COL.COLO4_00533 Corchorus olitorius HOM05D015026 ORTHO05D015810 7.8e-10 67.8 95 42.1
Lalb_Chr00c51g0413231 Lupinus albus HOM05D056483 ORTHO05D015810 4.3e-08 62.0 89 33.7


User provided reference genes

Program Settings