Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G07706 Arabidopsis thaliana HOM05D020812 ORTHO05D023689 2.5e-289 998.0 505 100.0
CARHR282850 Cardamine hirsuta HOM05D020812 ORTHO05D020154 2.1e-182 642.9 363 92.0
ATMG00470 Arabidopsis thaliana HOM05D020812 ORTHO05D014342 2.6e-36 157.5 79 98.7
BolSC28t60332H Brassica oleracea HOM05D029380 ORTHO05D023689 4.5e-20 103.6 78 74.4
BraSC48t46278Z Brassica rapa HOM05D029380 ORTHO05D023689 4.5e-20 103.6 78 74.4
BraSC77t46638Z Brassica rapa HOM05D029380 ORTHO05D023689 4.5e-20 103.6 78 74.4
Thhalv10023097m.g Eutrema salsugineum HOM05D020812 ORTHO05D014342 4.2e-18 97.1 56 87.5
Thhalv10002987m.g Eutrema salsugineum HOM05D020812 ORTHO05D014342 5.5e-18 96.7 56 85.7
BNapus_Darmor_BZH_scaffold_234p00180 Brassica napus HOM05D021308 ORTHO05D020154 3.3e-10 70.9 41 87.8
C04p19610 Brassica napus HOM05D021308 ORTHO05D020154 3.3e-10 70.9 41 87.8
C09p21570 Brassica napus HOM05D021308 ORTHO05D020154 3.3e-10 70.9 41 87.8
BolC4t23496H Brassica oleracea HOM05D021308 ORTHO05D020154 3.3e-10 70.9 41 87.8
BolC9t55062H Brassica oleracea HOM05D021308 ORTHO05D020154 3.3e-10 70.9 41 87.8
BolSC28t60348H Brassica oleracea HOM05D021308 ORTHO05D020154 3.3e-10 70.9 41 87.8
Gorai.001G162300 Gossypium raimondii HOM05D003430 ORTHO05D004809 3.0e-08 64.3 67 59.7
SHI36541 Sapria himalayana HOM05D001966 ORTHO05D010449 5.2e-08 63.5 98 43.9
arahy.Tifrunner.gnm1.ann1.A6TYH4 Arachis hypogaea HOM05D001966 ORTHO05D010449 8.9e-08 62.8 89 47.2
arahy.Tifrunner.gnm1.ann1.EPN6WV Arachis hypogaea HOM05D001966 ORTHO05D010449 8.9e-08 62.8 89 47.2
Psat0s1116g0080 Pisum sativum HOM05D004182 ORTHO05D007321 2.0e-07 61.6 89 47.2
Gohir.D11G237220 Gossypium hirsutum HOM05D001966 ORTHO05D010449 4.4e-07 60.5 80 48.8
arahy.Tifrunner.gnm1.ann1.2N2B18 Arachis hypogaea HOM05D008259 ORTHO05D010449 7.5e-07 59.7 75 49.3
Lj4g0021959 Lotus japonicus HOM05D008259 ORTHO05D010449 7.5e-07 59.7 78 48.7
EL10As15g24132 Beta vulgaris HOM05D008259 ORTHO05D010449 2.2e-06 58.2 84 47.6
Gorai.007G250500 Gossypium raimondii HOM05D001966 ORTHO05D010449 2.9e-06 57.8 91 42.9
arahy.Tifrunner.gnm1.ann1.1MX66Y Arachis hypogaea HOM05D008259 ORTHO05D010449 3.7e-06 57.4 62 56.5
EL10As10g23965 Beta vulgaris HOM05D001966 ORTHO05D007227 6.4e-06 56.6 41 73.2


User provided reference genes

Program Settings