Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G07599 Arabidopsis thaliana HOM05D009884 ORTHO05D012165 2.5e-195 685.3 347 100.0
EL10Ac6g14232 Beta vulgaris HOM05D009884 ORTHO05D012165 1.2e-69 267.7 193 74.6
HanXRQMTg0579321 Helianthus annuus HOM05D009884 ORTHO05D012165 2.4e-65 253.4 151 85.4
Lj2A1228T86 Lonicera japonica HOM05D009884 ORTHO05D012165 1.3e-61 241.1 171 74.9
Lj2A1234T114 Lonicera japonica HOM05D009884 ORTHO05D012165 2.8e-61 240.0 163 77.3
Gorai.001G164300 Gossypium raimondii HOM05D009884 ORTHO05D012165 1.8e-47 194.1 123 80.5
Gorai.013G212600 Gossypium raimondii HOM05D009884 ORTHO05D012165 3.7e-45 186.4 161 65.2
Gohir.D04G096548 Gossypium hirsutum HOM05D009884 ORTHO05D012165 6.9e-44 182.2 123 76.4
BcaC05g26892 Brassica carinata HOM05D009884 ORTHO05D012165 3.9e-31 139.8 72 97.2
BolSC28t60399H Brassica oleracea HOM05D009884 ORTHO05D012165 3.9e-31 139.8 72 97.2
BraSC159t45723Z Brassica rapa HOM05D009884 ORTHO05D012165 3.9e-31 139.8 72 97.2
Sed0016567 Sechium edule HOM05D009884 ORTHO05D012165 1.3e-29 134.8 101 71.3
HanXRQChr08g0236081 Helianthus annuus HOM05D009884 ORTHO05D012165 9.7e-22 108.6 58 93.1
HanXRQChr09g0242431 Helianthus annuus HOM05D009884 ORTHO05D012165 4.8e-21 106.3 58 91.4
ECA233G3096 Erigeron canadensis HOM05D009884 ORTHO05D012165 1.1e-17 95.1 48 95.8
CDE02G3846 Ceratophyllum demersum HOM05D009884 ORTHO05D012165 2.8e-13 80.5 45 88.9
ATR0584G178 Amborella trichopoda HOM05D009884 ORTHO05D012165 3.7e-13 80.1 94 48.9
unitig_87.g27988 Utricularia gibba HOM05D009884 ORTHO05D012165 4.2e-09 66.6 39 82.1
CARHR283310 Cardamine hirsuta HOM05D041649 ORTHO05D030978 4.7e-08 63.2 64 54.7
ATMG01040 Arabidopsis thaliana HOM05D041649 ORTHO05D030978 6.1e-08 62.8 64 54.7
RcHm_v2.0_Chr6g0256741 Rosa chinensis HOM05D009884 ORTHO05D012165 4.0e-07 60.1 28 92.9
RcHm_v2.0_MTg0498811 Rosa chinensis HOM05D009884 ORTHO05D012165 4.0e-07 60.1 28 92.9
Aa31csc464G40 Aethionema arabicum HOM05D041649 ORTHO05D030978 6.7e-07 59.3 47 68.1
Lj2A1224T107 Lonicera japonica HOM05D009884 ORTHO05D012165 6.7e-07 59.3 28 92.9
BraSC77t46670Z Brassica rapa HOM05D009884 ORTHO05D012165 1.5e-06 58.2 29 100.0
ECA246G3847 Erigeron canadensis HOM05D002622 ORTHO05D002837 2.0e-06 57.8 34 79.4


User provided reference genes

Program Settings