Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G06005 Arabidopsis thaliana HOM05D002335 ORTHO05D006282 9.4e-143 510.4 296 100.0
AL3G43580 Arabidopsis lyrata HOM05D002335 ORTHO05D006282 7.0e-138 494.2 296 97.3
CARHR103630 Cardamine hirsuta HOM05D002335 ORTHO05D006282 1.8e-133 479.6 296 94.9
Sp3g24570 Schrenkiella parvula HOM05D002335 ORTHO05D006282 3.4e-132 475.3 295 92.5
Carub.0003s2712 Capsella rubella HOM05D002335 ORTHO05D006282 2.2e-131 472.6 297 94.3
BcaB06g26879 Brassica carinata HOM05D002335 ORTHO05D006282 4.7e-126 454.9 290 83.8
A07p06320 Brassica napus HOM05D002335 ORTHO05D006282 6.8e-125 451.1 295 82.0
BcaC06g35950 Brassica carinata HOM05D002335 ORTHO05D006282 1.2e-124 450.3 295 83.1
Aa31sc133G10 Aethionema arabicum HOM05D002335 ORTHO05D006282 9.2e-122 440.7 285 83.5
C07p09370 Brassica napus HOM05D002335 ORTHO05D006282 1.6e-121 439.9 279 84.6
BolC7t41360H Brassica oleracea HOM05D002335 ORTHO05D006282 1.6e-121 439.9 279 84.6
THA.LOC104815334 Tarenaya hassleriana HOM05D002335 ORTHO05D006282 7.8e-121 437.6 286 81.8
BraA07t28424Z Brassica rapa HOM05D002335 ORTHO05D006282 3.9e-120 435.3 295 80.7
Ciclev10008755m.g Citrus clementina HOM05D002335 ORTHO05D006282 1.2e-110 403.7 286 77.6
Hma1.2p1_0169F.1_g074510 Hydrangea macrophylla HOM05D002335 ORTHO05D006282 2.2e-107 392.9 281 75.1
GSVIVG01015081001 Vitis vinifera HOM05D002335 ORTHO05D006282 9.2e-106 387.5 288 80.9
CiPaw.04G143000 Carya illinoinensis HOM05D002335 ORTHO05D006282 2.7e-105 386.0 296 72.0
Cfa002987 Carpinus fangiana HOM05D002335 ORTHO05D006282 3.5e-105 385.6 294 71.1
Potri.018G056500 Populus trichocarpa HOM05D002335 ORTHO05D006282 7.8e-105 384.4 295 71.5
TPR.G27760 Trifolium pratense HOM05D002335 ORTHO05D006282 3.9e-104 382.1 290 72.1
CSS0005090 Camellia sinensis var. sinensis HOM05D002335 ORTHO05D006282 6.6e-104 381.3 296 77.7
Lj6g0009960 Lotus japonicus HOM05D002335 ORTHO05D006282 6.6e-104 381.3 293 75.4
FvH4_1g08690 Fragaria vesca HOM05D002335 ORTHO05D006282 8.6e-104 380.9 295 70.8
Dinv25558 Davidia involucrata HOM05D002335 ORTHO05D006282 1.1e-103 380.6 281 81.1
Gohir.D13G196375 Gossypium hirsutum HOM05D002335 ORTHO05D006282 1.9e-103 379.8 295 71.2
PGR044G1875 Punica granatum HOM05D002335 ORTHO05D006282 3.3e-103 379.0 285 75.8
Phvul.009G227200 Phaseolus vulgaris HOM05D002335 ORTHO05D006282 4.3e-103 378.6 285 71.9
Glyma.15G177700 Glycine max HOM05D002335 ORTHO05D006282 7.3e-103 377.9 294 71.4
Dinv42395 Davidia involucrata HOM05D002335 ORTHO05D006282 9.5e-103 377.5 290 78.3
Glyma.09G069700 Glycine max HOM05D002335 ORTHO05D006282 2.8e-102 375.9 293 73.7
Duzib187G0696 Durio zibethinus HOM05D002335 ORTHO05D006282 3.6e-102 375.6 295 76.9
Migut.J00924 Erythranthe guttata HOM05D002335 ORTHO05D006282 3.6e-102 375.6 296 70.9
Gohir.A13G190800 Gossypium hirsutum HOM05D002335 ORTHO05D006282 3.6e-102 375.6 295 70.2
Gorai.013G224300 Gossypium raimondii HOM05D002335 ORTHO05D006282 4.7e-102 375.2 296 70.9
MD02G1091400 Malus domestica HOM05D002335 ORTHO05D006282 8.1e-102 374.4 294 75.9
COL.COLO4_18096 Corchorus olitorius HOM05D002335 ORTHO05D006282 1.8e-101 373.2 294 76.2
CANSAT56G2952 Cannabis sativa HOM05D002335 ORTHO05D006282 2.3e-101 372.9 295 77.3
Thecc.09G076700 Theobroma cacao HOM05D002335 ORTHO05D006282 4.0e-101 372.1 295 76.9
VMungo1309G0226 Vigna mungo HOM05D002335 ORTHO05D006282 4.0e-101 372.1 293 70.3
Ca_02205_v3 Cicer arietinum L. HOM05D002335 ORTHO05D006282 1.2e-100 370.5 294 75.5
Manes.16G095200 Manihot esculenta HOM05D002335 ORTHO05D006282 2.6e-100 369.4 285 72.3
FAN26G1551 Fragaria x ananassa HOM05D002335 ORTHO05D006282 1.3e-99 367.1 295 75.6
Peaxi162Scf00928g00036 Petunia axillaris HOM05D002335 ORTHO05D006282 1.3e-99 367.1 290 69.7
SalBow6G4624 Salvia bowleyana HOM05D002335 ORTHO05D006282 1.3e-99 367.1 277 72.9
MSTRG.19458 Avicennia marina HOM05D002335 ORTHO05D006282 8.4e-99 364.4 295 76.3
FAN28G1803 Fragaria x ananassa HOM05D002335 ORTHO05D006282 1.1e-98 364.0 295 74.9
SGA_v2.0_scaffold308G48076 Striga asiatica HOM05D002335 ORTHO05D006282 1.1e-98 364.0 298 72.1
Medtr2g041690 Medicago truncatula HOM05D002335 ORTHO05D006282 1.4e-98 363.6 294 74.1
TAR383G0969 Trochodendron aralioides HOM05D002335 ORTHO05D006282 1.9e-98 363.2 285 74.7
ClCG03G015070 Citrullus lanatus HOM05D002335 ORTHO05D006282 2.4e-98 362.8 295 68.5
RcHm_v2.0_Chr2g0095141 Rosa chinensis HOM05D002335 ORTHO05D006282 4.1e-98 362.1 285 76.1
Sed0016034 Sechium edule HOM05D002335 ORTHO05D006282 4.1e-98 362.1 295 69.2
Nn8g38636 Nelumbo nucifera HOM05D002335 ORTHO05D006282 5.4e-98 361.7 291 73.9
Haze_26014 Corylus avellana HOM05D002335 ORTHO05D006282 1.6e-97 360.1 276 72.1
Psat1g134320 Pisum sativum HOM05D002335 ORTHO05D006282 2.7e-97 359.4 274 75.5
MBI19_g16223_MAGBIO Magnolia biondii HOM05D002335 ORTHO05D006282 4.6e-97 358.6 295 72.9
Thhalv10014003m.g Eutrema salsugineum HOM05D002335 ORTHO05D006282 1.7e-96 356.7 285 68.8
Solyc12g009100.2 Solanum lycopersicum HOM05D002335 ORTHO05D006282 1.7e-96 356.7 289 68.5
Sopen12g004050 Solanum pennellii HOM05D002335 ORTHO05D006282 3.0e-96 355.9 289 68.2
Eucgr.C03263 Eucalyptus grandis HOM05D002335 ORTHO05D006282 3.9e-96 355.5 295 66.4
C03p11680 Brassica napus HOM05D002335 ORTHO05D006282 5.1e-96 355.1 285 68.8
BolC3t13639H Brassica oleracea HOM05D005537 ORTHO05D006776 5.1e-96 355.1 285 68.8
Cc06_g12190 Coffea canephora HOM05D002335 ORTHO05D006282 5.1e-96 355.1 290 74.8
HanXRQChr04g0126011 Helianthus annuus HOM05D002335 ORTHO05D006282 5.1e-96 355.1 287 67.6
BraA03t10325Z Brassica rapa HOM05D002335 ORTHO05D006282 6.6e-96 354.8 285 68.8
Sp6g23900 Schrenkiella parvula HOM05D002335 ORTHO05D006282 1.1e-95 354.0 285 68.4
Duzib168G0796 Durio zibethinus HOM05D002335 ORTHO05D006282 2.5e-95 352.8 283 75.6
Eucgr.C03328 Eucalyptus grandis HOM05D002335 ORTHO05D006282 3.3e-95 352.4 286 68.5
TWI34G0307 Tripterygium wilfordii HOM05D002335 ORTHO05D006282 3.3e-95 352.4 295 67.5
PSO135G0390 Papaver somniferum HOM05D002335 ORTHO05D006282 5.6e-95 351.7 291 65.6
ECA236G4601 Erigeron canadensis HOM05D002335 ORTHO05D006282 7.3e-95 351.3 286 66.8
Aqoxy7G04129 Aquilegia oxysepala HOM05D002335 ORTHO05D006282 1.6e-94 350.1 295 71.5
Sabra18G0052300 Salix brachista HOM05D002335 ORTHO05D006282 2.8e-94 349.4 374 55.9
Hund26035 Selenicereus undatus HOM05D002335 ORTHO05D006282 2.8e-94 349.4 283 67.1
AUR62028934 Chenopodium quinoa HOM05D002335 ORTHO05D006282 3.6e-94 349.0 294 65.6
AL6G32120 Arabidopsis lyrata HOM05D002335 ORTHO05D006282 8.1e-94 347.8 284 68.7
PSO724G0129 Papaver somniferum HOM05D002335 ORTHO05D006282 8.1e-94 347.8 291 64.3
THA.LOC104799620 Tarenaya hassleriana HOM05D002335 ORTHO05D006282 8.1e-94 347.8 281 69.8
QL11p000781 Quercus lobata HOM05D002335 ORTHO05D006282 1.1e-93 347.4 271 78.2
CARHR192220 Cardamine hirsuta HOM05D002335 ORTHO05D006282 1.8e-93 346.7 282 68.8
Carub.0006s1891 Capsella rubella HOM05D002335 ORTHO05D006282 4.0e-93 345.5 284 68.0
AT5G20580 Arabidopsis thaliana HOM05D002335 ORTHO05D006282 6.9e-93 344.7 284 68.3
Lsat_1_v5_gn_8_86481 Lactuca sativa HOM05D002335 ORTHO05D006282 6.9e-93 344.7 287 66.2
Actinidia29935 Actinidia chinensis HOM05D002335 ORTHO05D006282 3.4e-92 342.4 277 76.9
AUR62025250 Chenopodium quinoa HOM05D002335 ORTHO05D006282 5.8e-92 341.7 294 64.3
HPP92_004364 Vanilla planifolia HOM05D002335 ORTHO05D006282 7.6e-92 341.3 283 70.0
MELO3C015522.2 Cucumis melo HOM05D002335 ORTHO05D006282 4.9e-91 338.6 294 72.1
EL10Ac8g19056 Beta vulgaris HOM05D002335 ORTHO05D006282 1.1e-90 337.4 312 61.2
MD15G1217700 Malus domestica HOM05D002335 ORTHO05D006282 1.4e-90 337.0 261 76.6
Manes.03G040500 Manihot esculenta HOM05D002335 ORTHO05D006282 1.9e-90 336.7 280 68.2
CsaV3_1G041060 Cucumis sativus L. HOM05D002335 ORTHO05D006282 3.2e-90 335.9 294 71.4
ATR0598G025 Amborella trichopoda HOM05D002335 ORTHO05D006282 6.6e-88 328.2 285 62.1
vmacro06343 Vaccinium macrocarpon HOM05D002335 ORTHO05D006282 5.6e-87 325.1 343 60.1
Prupe.7G198700 Prunus persica HOM05D002335 ORTHO05D006282 2.8e-86 322.8 283 70.3
Nitab4.5_0011754g0010 Nicotiana tabacum HOM05D002335 ORTHO05D006282 4.8e-86 322.0 306 61.1
Atru.chr7.1708 Acer truncatum HOM05D002335 ORTHO05D006282 1.4e-85 320.5 223 75.8
Sopen07g021360 Solanum pennellii HOM05D002335 ORTHO05D006282 5.3e-85 318.5 283 71.0
arahy.Tifrunner.gnm1.ann1.UHGN3W Arachis hypogaea HOM05D002335 ORTHO05D006282 1.5e-84 317.0 280 68.9
Zm00001eb256890 Zea mays HOM05D002335 ORTHO05D006282 2.7e-81 306.2 271 60.9
Lsat_1_v5_gn_7_35121 Lactuca sativa HOM05D002335 ORTHO05D006692 7.9e-81 304.7 277 69.7
SHI23809 Sapria himalayana HOM05D002335 ORTHO05D006282 1.3e-78 297.4 235 69.4
Sc18g0002560 Simmondsia chinensis HOM05D002335 ORTHO05D006282 3.1e-77 292.7 246 75.6
Rhsim03G0227400 Rhododendron simsii HOM05D002335 ORTHO05D005129 7.6e-76 288.1 329 61.4
CAN.G1661.12 Capsicum annuum HOM05D002335 ORTHO05D006282 4.9e-75 285.4 283 60.1
TWI63G1279 Tripterygium wilfordii HOM05D002335 ORTHO05D006282 1.9e-74 283.5 293 65.5
HPP92_004366 Vanilla planifolia HOM05D002335 ORTHO05D006282 1.5e-71 273.9 283 60.8
FAN23G1616 Fragaria x ananassa HOM05D002335 ORTHO05D006282 7.4e-71 271.6 249 64.7
Psat3g025000 Pisum sativum HOM05D002335 ORTHO05D006282 9.6e-71 271.2 187 73.8
SEGI_06962 Sequoiadendron giganteum HOM05D002335 ORTHO05D006282 1.1e-69 267.7 286 53.8
Aa31LG1G14100 Aethionema arabicum HOM05D002335 ORTHO05D006282 3.1e-69 266.2 380 47.9
Lj7C687T14 Lonicera japonica HOM05D002335 ORTHO05D006282 1.2e-68 264.2 197 75.6
Nitab4.5_0000073g0170 Nicotiana tabacum HOM05D002335 ORTHO05D006282 2.6e-68 263.1 360 48.6
Peaxi162Scf00127g01814 Petunia axillaris HOM05D002335 ORTHO05D006282 7.6e-68 261.5 228 67.1
Cpa.g.sc28.33 Carica papaya HOM05D002335 ORTHO05D006282 6.5e-67 258.5 169 78.7
CDE02G0868 Ceratophyllum demersum HOM05D002335 ORTHO05D006282 2.5e-66 256.5 217 65.4
Nitab4.5_0009436g0040 Nicotiana tabacum HOM05D002335 ORTHO05D006282 1.6e-62 243.8 367 46.9
DCAR_028335 Daucus carota HOM05D002335 ORTHO05D006282 6.9e-61 238.4 181 79.0
Mapoly0011s0025 Marchantia polymorpha HOM05D002335 ORTHO05D006282 2.3e-56 223.4 270 45.6
CAN.G404.48 Capsicum annuum HOM05D002335 ORTHO05D006282 9.7e-55 218.0 239 54.4
Pp3c22_13730 Physcomitrium patens HOM05D002335 ORTHO05D006282 3.1e-53 213.0 275 45.8
arahy.Tifrunner.gnm1.ann1.3UYF95 Arachis hypogaea HOM05D002335 ORTHO05D006282 1.0e-48 198.0 139 71.2
Lalb_Chr23g0276371 Lupinus albus HOM05D002335 ORTHO05D006282 6.7e-48 195.3 134 73.1
Pp3c2_6470 Physcomitrium patens HOM05D002335 ORTHO05D006282 4.8e-46 189.1 286 40.6
Lalb_Chr07g0181191 Lupinus albus HOM05D002335 ORTHO05D006282 5.9e-44 182.2 176 56.8
SMO358G0254 Selaginella moellendorffii HOM05D002335 ORTHO05D006282 1.1e-39 167.9 203 49.3
Lalb_Chr23g0276381 Lupinus albus HOM05D002335 ORTHO05D006282 2.6e-39 166.8 144 67.4
Lalb_Chr07g0181181 Lupinus albus HOM05D002335 ORTHO05D006282 9.1e-37 158.3 170 67.1
Actinidia38481 Actinidia chinensis HOM05D002335 ORTHO05D006282 1.8e-29 134.0 123 82.1
Actinidia38482 Actinidia chinensis HOM05D002335 ORTHO05D006282 1.2e-28 131.3 91 72.5
AagrBONN_evm.TU.Sc2ySwM_344.5493 Anthoceros agrestis HOM05D002335 ORTHO05D006282 5.9e-28 129.0 255 32.9
Nitab4.5_0000343g0220 Nicotiana tabacum HOM05D002335 ORTHO05D006282 4.2e-26 122.9 86 72.1
MD02G1091600 Malus domestica HOM05D002335 ORTHO05D006282 1.2e-25 121.3 88 65.9
Nitab4.5_0000343g0210 Nicotiana tabacum HOM05D002335 ORTHO05D006282 7.5e-23 112.1 127 55.1
Cpa.g.sc28.37 Carica papaya HOM05D002335 ORTHO05D006282 3.7e-22 109.8 112 59.8
Solyc07g041890.1 Solanum lycopersicum HOM05D002335 ORTHO05D006282 3.1e-21 106.7 164 43.9
CBR_g26318 Chara braunii HOM05D002335 ORTHO05D006282 9.1e-21 105.1 220 33.2
Medtr2g041390 Medicago truncatula HOM05D002335 ORTHO05D006282 6.5e-19 99.0 111 71.2
Oeu031390.1 Olea europaea HOM05D002335 ORTHO05D006282 3.7e-14 83.2 50 78.0
Psat6g064600 Pisum sativum HOM05D004726 ORTHO05D005986 7.0e-13 79.0 53 77.4
Ah.14g084930 Amaranthus hybridus HOM05D002335 ORTHO05D006282 1.1e-10 71.6 87 51.7
Oeu011491.2 Olea europaea HOM05D002335 ORTHO05D006282 5.7e-07 59.3 41 70.7


User provided reference genes

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