Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G05620 Arabidopsis thaliana HOM05D004828 ORTHO05D005713 7.7e-68 260.4 134 100.0
AL3G43120 Arabidopsis lyrata HOM05D004828 ORTHO05D005713 7.2e-66 253.8 134 97.0
Carub.0003s2689 Capsella rubella HOM05D004828 ORTHO05D005713 5.9e-60 234.2 134 90.3
Sp3g24080 Schrenkiella parvula HOM05D004828 ORTHO05D005713 3.6e-57 224.9 134 87.3
BcaB06g26846 Brassica carinata HOM05D004828 ORTHO05D005713 8.0e-57 223.8 133 87.2
BcaC01g03156 Brassica carinata HOM05D004828 ORTHO05D005713 1.0e-56 223.4 133 87.2
Thhalv10002723m.g Eutrema salsugineum HOM05D004828 ORTHO05D005713 1.8e-56 222.6 134 86.6
A03p44660 Brassica napus HOM05D004828 ORTHO05D005713 6.8e-56 220.7 135 86.7
BraA03t13600Z Brassica rapa HOM05D004828 ORTHO05D005713 6.8e-56 220.7 135 86.7
BcaC06g35923 Brassica carinata HOM05D004828 ORTHO05D005713 4.4e-55 218.0 133 85.0
C07p09630 Brassica napus HOM05D004828 ORTHO05D005713 4.4e-55 218.0 133 85.0
BolC7t41404H Brassica oleracea HOM05D004828 ORTHO05D005713 4.4e-55 218.0 133 85.0
BcaB08g34505 Brassica carinata HOM05D004828 ORTHO05D005713 5.7e-55 217.6 134 85.1
C03p55490 Brassica napus HOM05D004828 ORTHO05D005713 3.7e-54 214.9 134 85.1
BolC3t17826H Brassica oleracea HOM05D004828 ORTHO05D005713 3.7e-54 214.9 134 85.1
CARHR103280 Cardamine hirsuta HOM05D004828 ORTHO05D005713 1.7e-51 206.1 134 82.1
Aa31LG8G11410 Aethionema arabicum HOM05D004828 ORTHO05D005713 1.5e-50 203.0 133 80.5
THA.LOC104808875 Tarenaya hassleriana HOM05D004828 ORTHO05D005713 9.4e-50 200.3 133 78.2
THA.LOC104826602 Tarenaya hassleriana HOM05D004828 ORTHO05D005713 4.7e-49 198.0 132 75.8
Glyma.20G085900 Glycine max HOM05D004828 ORTHO05D005713 7.5e-47 190.7 133 77.4
VMungo0720G1886 Vigna mungo HOM05D004828 ORTHO05D005713 3.7e-46 188.3 133 76.7
Lsat_1_v5_gn_1_75300 Lactuca sativa HOM05D004828 ORTHO05D005713 4.9e-46 188.0 134 75.4
Medtr1g045140 Medicago truncatula HOM05D004828 ORTHO05D005713 6.3e-46 187.6 134 76.9
Psat6g106280 Pisum sativum HOM05D004828 ORTHO05D005713 6.3e-46 187.6 134 76.1
Glyma.10G136300 Glycine max HOM05D004828 ORTHO05D005713 1.4e-45 186.4 133 75.9
Phvul.007G271000 Phaseolus vulgaris HOM05D004828 ORTHO05D005713 1.4e-45 186.4 133 75.9
COL.COLO4_15949 Corchorus olitorius HOM05D004828 ORTHO05D005713 1.8e-45 186.0 134 77.6
Actinidia39923 Actinidia chinensis HOM05D004828 ORTHO05D005713 3.1e-45 185.3 132 72.0
CSS0013271 Camellia sinensis var. sinensis HOM05D004828 ORTHO05D005713 3.1e-45 185.3 132 76.5
Lj6g0012692 Lotus japonicus HOM05D004828 ORTHO05D005713 3.1e-45 185.3 133 73.7
Thecc.04G262300 Theobroma cacao HOM05D004828 ORTHO05D005713 4.1e-45 184.9 132 77.3
Lalb_Chr01g0020281 Lupinus albus HOM05D004828 ORTHO05D005713 7.0e-45 184.1 119 78.2
MD13G1219800 Malus domestica HOM05D004828 ORTHO05D005713 7.0e-45 184.1 119 79.0
MD16G1225200 Malus domestica HOM05D004828 ORTHO05D005713 7.0e-45 184.1 119 79.0
MELO3C023036.2 Cucumis melo HOM05D004828 ORTHO05D005713 1.6e-44 183.0 134 73.1
CsaV3_2G012500 Cucumis sativus L. HOM05D004828 ORTHO05D005713 1.6e-44 183.0 134 73.1
arahy.Tifrunner.gnm1.ann1.DHUA7P Arachis hypogaea HOM05D004828 ORTHO05D005713 2.0e-44 182.6 133 73.7
arahy.Tifrunner.gnm1.ann1.P56WT2 Arachis hypogaea HOM05D004828 ORTHO05D005713 2.0e-44 182.6 133 73.7
Cfa014773 Carpinus fangiana HOM05D004828 ORTHO05D005713 2.7e-44 182.2 121 78.5
Ca_11922_v3 Cicer arietinum L. HOM05D004828 ORTHO05D005713 2.7e-44 182.2 133 73.7
TPR.G23990 Trifolium pratense HOM05D004828 ORTHO05D005713 3.5e-44 181.8 119 77.3
ClCG06G007210 Citrullus lanatus HOM05D004828 ORTHO05D005713 4.5e-44 181.4 134 73.1
Haze_11447 Corylus avellana HOM05D004828 ORTHO05D005713 4.5e-44 181.4 121 78.5
HanXRQChr01g0022921 Helianthus annuus HOM05D004828 ORTHO05D005713 4.5e-44 181.4 134 70.1
Eucgr.H02963 Eucalyptus grandis HOM05D004828 ORTHO05D005713 5.9e-44 181.0 134 70.9
HanXRQChr11g0343071 Helianthus annuus HOM05D004828 ORTHO05D005713 1.3e-43 179.9 134 71.6
CSS0001982 Camellia sinensis var. sinensis HOM05D004828 ORTHO05D005713 2.3e-43 179.1 133 74.4
Rhsim04G0173400 Rhododendron simsii HOM05D004828 ORTHO05D005713 2.9e-43 178.7 131 71.8
RcHm_v2.0_Chr4g0394991 Rosa chinensis HOM05D004828 ORTHO05D005713 2.9e-43 178.7 132 75.0
Migut.G00486 Erythranthe guttata HOM05D004828 ORTHO05D005713 3.8e-43 178.3 120 73.3
FvH4_4g04430 Fragaria vesca HOM05D004828 ORTHO05D005713 3.8e-43 178.3 132 75.0
FAN17G1436 Fragaria x ananassa HOM05D004828 ORTHO05D005713 3.8e-43 178.3 132 75.0
vmacro08545 Vaccinium macrocarpon HOM05D004828 ORTHO05D005713 3.8e-43 178.3 130 72.3
QL06p020769 Quercus lobata HOM05D004828 ORTHO05D005713 5.0e-43 177.9 131 74.8
CiPaw.01G179200 Carya illinoinensis HOM05D004828 ORTHO05D005713 6.6e-43 177.6 132 73.5
Duzib212G0408 Durio zibethinus HOM05D004828 ORTHO05D005713 8.6e-43 177.2 136 73.5
Lsat_1_v5_gn_6_68641 Lactuca sativa HOM05D004828 ORTHO05D005713 8.6e-43 177.2 134 70.1
Oeu055253.1 Olea europaea HOM05D004828 ORTHO05D005713 8.6e-43 177.2 132 72.7
Oeu059400.1 Olea europaea HOM05D004828 ORTHO05D005713 8.6e-43 177.2 132 73.5
HanXRQChr02g0059331 Helianthus annuus HOM05D004828 ORTHO05D005713 1.1e-42 176.8 127 70.1
PGR004G2594 Punica granatum HOM05D004828 ORTHO05D005713 1.1e-42 176.8 132 71.2
TAR362G0439 Trochodendron aralioides HOM05D004828 ORTHO05D005713 1.5e-42 176.4 132 75.8
Prupe.1G046500 Prunus persica HOM05D004828 ORTHO05D005713 1.9e-42 176.0 132 75.0
PSO674G0081 Papaver somniferum HOM05D004828 ORTHO05D005713 1.2e-41 173.3 134 71.6
PSO832G3336 Papaver somniferum HOM05D004828 ORTHO05D005713 1.2e-41 173.3 134 71.6
Potri.008G171000 Populus trichocarpa HOM05D004828 ORTHO05D005713 1.2e-41 173.3 132 73.5
Dinv27097 Davidia involucrata HOM05D004828 ORTHO05D005713 1.6e-41 172.9 132 71.2
Cpa.g.sc44.12 Carica papaya HOM05D004828 ORTHO05D005713 2.8e-41 172.2 132 71.2
CsaV3_3G011780 Cucumis sativus L. HOM05D004828 ORTHO05D005713 3.6e-41 171.8 132 71.2
Gohir.D01G023418 Gossypium hirsutum HOM05D004828 ORTHO05D005713 3.6e-41 171.8 130 73.1
GSVIVG01027902001 Vitis vinifera HOM05D004828 ORTHO05D005713 3.6e-41 171.8 134 68.7
MELO3C006384.2 Cucumis melo HOM05D004828 ORTHO05D005713 8.0e-41 170.6 132 69.7
Hma1.2p1_0112F.1_g054580 Hydrangea macrophylla HOM05D004828 ORTHO05D005713 1.0e-40 170.2 132 70.5
TAR365G0027 Trochodendron aralioides HOM05D004828 ORTHO05D005713 1.0e-40 170.2 119 74.8
Gorai.002G026400 Gossypium raimondii HOM05D004828 ORTHO05D005713 1.8e-40 169.5 130 72.3
Manes.03G160100 Manihot esculenta HOM05D004828 ORTHO05D005713 2.3e-40 169.1 124 74.2
Sabra08G0130800 Salix brachista HOM05D004828 ORTHO05D005713 2.3e-40 169.1 121 74.4
CiPaw.02G107900 Carya illinoinensis HOM05D004828 ORTHO05D005713 3.0e-40 168.7 132 72.7
AUR62035095 Chenopodium quinoa HOM05D004828 ORTHO05D005713 3.0e-40 168.7 123 77.2
ECA248G3746 Erigeron canadensis HOM05D002764 ORTHO05D002960 3.0e-40 168.7 129 67.4
Sed0009082 Sechium edule HOM05D004828 ORTHO05D005713 4.0e-40 168.3 134 71.6
Hund03081 Selenicereus undatus HOM05D004828 ORTHO05D005713 4.0e-40 168.3 135 71.9
Ah.04g155350 Amaranthus hybridus HOM05D004828 ORTHO05D005713 5.2e-40 167.9 134 70.1
MSTRG.4162 Avicennia marina HOM05D004828 ORTHO05D005713 5.2e-40 167.9 120 74.2
EL10Ac3g04953 Beta vulgaris HOM05D004828 ORTHO05D005713 5.2e-40 167.9 134 70.9
Lalb_Chr19g0128491 Lupinus albus HOM05D004828 ORTHO05D005713 5.2e-40 167.9 120 71.7
Rhsim02G0043000 Rhododendron simsii HOM05D004828 ORTHO05D005713 5.2e-40 167.9 140 67.1
Ciclev10006216m.g Citrus clementina HOM05D004828 ORTHO05D005713 1.2e-39 166.8 136 68.4
Cc03_g06030 Coffea canephora HOM05D004828 ORTHO05D005713 1.2e-39 166.8 132 68.2
Dinv29813 Davidia involucrata HOM05D004828 ORTHO05D005713 1.2e-39 166.8 134 70.9
Aqoxy2G03727 Aquilegia oxysepala HOM05D004828 ORTHO05D005713 1.5e-39 166.4 131 67.2
Migut.N00294 Erythranthe guttata HOM05D004828 ORTHO05D005713 2.6e-39 165.6 134 68.7
Hma1.2p1_0385F.1_g141490 Hydrangea macrophylla HOM05D004828 ORTHO05D005713 3.4e-39 165.2 134 69.4
Potri.010G066900 Populus trichocarpa HOM05D004828 ORTHO05D005713 3.4e-39 165.2 132 72.0
Atru.chr4.1937 Acer truncatum HOM05D004828 ORTHO05D005713 4.4e-39 164.9 134 72.4
Actinidia35812 Actinidia chinensis HOM05D004828 ORTHO05D005713 5.7e-39 164.5 132 72.0
Aqoxy5G00162 Aquilegia oxysepala HOM05D004828 ORTHO05D005713 5.7e-39 164.5 132 72.0
vmacro15472 Vaccinium macrocarpon HOM05D004828 ORTHO05D005713 5.7e-39 164.5 132 68.2
Manes.15G044800 Manihot esculenta HOM05D004828 ORTHO05D005713 7.5e-39 164.1 123 73.2
MBI07_g12928_MAGBIO Magnolia biondii HOM05D004828 ORTHO05D005713 9.8e-39 163.7 133 68.4
AUR62016177 Chenopodium quinoa HOM05D004828 ORTHO05D005713 3.7e-38 161.8 121 76.0
Duzib151G0671 Durio zibethinus HOM05D004828 ORTHO05D005713 1.4e-37 159.8 132 70.5
Nitab4.5_0001051g0110 Nicotiana tabacum HOM05D004828 ORTHO05D005713 1.4e-37 159.8 111 76.6
TWI73G1205 Tripterygium wilfordii HOM05D004828 ORTHO05D005713 1.4e-37 159.8 119 71.4
CAN.G220.85 Capsicum annuum HOM05D004828 ORTHO05D005713 2.4e-37 159.1 111 76.6
Sc13g0006160 Simmondsia chinensis HOM05D004828 ORTHO05D005713 2.4e-37 159.1 133 68.4
Gohir.A09G227900 Gossypium hirsutum HOM05D004828 ORTHO05D005713 4.1e-37 158.3 133 66.2
Gohir.D09G228900 Gossypium hirsutum HOM05D004828 ORTHO05D005713 4.1e-37 158.3 133 66.2
Gorai.006G251600 Gossypium raimondii HOM05D004828 ORTHO05D005713 4.1e-37 158.3 133 66.2
Nitab4.5_0002709g0020 Nicotiana tabacum HOM05D004828 ORTHO05D005713 4.1e-37 158.3 111 75.7
Os08g0566600 Oryza sativa ssp. japonica HOM05D004828 ORTHO05D005713 4.1e-37 158.3 134 64.9
Hund27524 Selenicereus undatus HOM05D004828 ORTHO05D005713 4.1e-37 158.3 134 64.2
Hund27531 Selenicereus undatus HOM05D004828 ORTHO05D005713 4.1e-37 158.3 134 64.2
Sabra10G0040600 Salix brachista HOM05D004828 ORTHO05D005713 7.0e-37 157.5 132 69.7
SGA_v2.0_scaffold31G12643 Striga asiatica HOM05D004828 ORTHO05D005713 1.6e-36 156.4 126 68.3
PGSC0003DMG400017198 Solanum tuberosum HOM05D004828 ORTHO05D005713 2.7e-36 155.6 111 73.9
CDE02G2944 Ceratophyllum demersum HOM05D004828 ORTHO05D005713 3.5e-36 155.2 134 64.2
Sopen09g033510 Solanum pennellii HOM05D004828 ORTHO05D005713 5.9e-36 154.5 111 73.9
TWI53G1324 Tripterygium wilfordii HOM05D004828 ORTHO05D005713 1.0e-35 153.7 104 79.8
Gohir.D10G159300 Gossypium hirsutum HOM05D004828 ORTHO05D005713 1.3e-35 153.3 128 68.8
Solyc09g090570.2 Solanum lycopersicum HOM05D004828 ORTHO05D005713 1.3e-35 153.3 111 73.0
Zm00001eb038530 Zea mays HOM05D004828 ORTHO05D005713 3.9e-35 151.8 111 69.4
FAN12G3003 Fragaria x ananassa HOM05D004828 ORTHO05D005713 6.6e-35 151.0 99 80.8
unitig_32.g10853 Utricularia gibba HOM05D004828 ORTHO05D005713 1.1e-34 150.2 115 71.3
ClCG05G004070 Citrullus lanatus HOM05D002764 ORTHO05D002960 1.5e-34 149.8 91 81.3
ATR1127G070 Amborella trichopoda HOM05D004828 ORTHO05D005713 2.5e-34 149.1 121 68.6
DCAR_027339 Daucus carota HOM05D004828 ORTHO05D005713 5.6e-34 147.9 91 83.5
Zm00001eb175600 Zea mays HOM05D004828 ORTHO05D005713 2.1e-33 146.0 116 67.2
SEGI_28577 Sequoiadendron giganteum HOM05D004828 ORTHO05D005713 3.1e-32 142.1 77 90.9
Gohir.A10G108500 Gossypium hirsutum HOM05D004828 ORTHO05D005713 2.0e-31 139.4 132 63.6
AL3G43100 Arabidopsis lyrata HOM05D004828 ORTHO05D005713 4.9e-30 134.8 78 87.2
Gorai.011G178900 Gossypium raimondii HOM05D004828 ORTHO05D005713 8.3e-30 134.0 120 65.0
Mapoly0121s0039 Marchantia polymorpha HOM05D004828 ORTHO05D005713 8.3e-30 134.0 87 79.3
CBR_g31156 Chara braunii HOM05D004828 ORTHO05D005713 5.4e-29 131.3 84 77.4
Pp3c8_17140 Physcomitrium patens HOM05D004828 ORTHO05D005713 7.0e-29 131.0 75 85.3
AagrBONN_evm.TU.Sc2ySwM_117.3192 Anthoceros agrestis HOM05D004828 ORTHO05D005713 1.6e-28 129.8 133 55.6
Pp3c24_11690 Physcomitrium patens HOM05D004828 ORTHO05D005713 3.5e-28 128.6 112 63.4
AL3G43090 Arabidopsis lyrata HOM05D004828 ORTHO05D005713 1.2e-25 120.2 69 88.4
HPP92_008537 Vanilla planifolia HOM05D004828 ORTHO05D005713 1.6e-25 119.8 117 54.7
Actinidia20833 Actinidia chinensis HOM05D004828 ORTHO05D005713 2.8e-25 119.0 69 87.0
Nn3g19756 Nelumbo nucifera HOM05D004828 ORTHO05D005713 1.1e-24 117.1 95 66.3
Peaxi162Scf00033g02911 Petunia axillaris HOM05D004828 ORTHO05D005713 1.8e-24 116.3 121 58.7
Sed0028180 Sechium edule HOM05D004828 ORTHO05D005713 1.2e-23 113.6 126 54.0
MCO16G064 Micromonas commoda HOM05D004828 ORTHO05D005713 5.8e-23 111.3 98 62.2
SalBow3G4432 Salvia bowleyana HOM05D004828 ORTHO05D005713 5.8e-23 111.3 135 54.1
Nn1g02928 Nelumbo nucifera HOM05D004828 ORTHO05D005713 4.1e-21 105.1 97 62.9
Gohir.A01G025800 Gossypium hirsutum HOM05D004828 ORTHO05D005713 2.1e-20 102.8 95 64.2
Cre05.g242400 Chlamydomonas reinhardtii HOM05D004828 ORTHO05D005713 3.0e-19 99.0 98 54.1
Oeu002290.1 Olea europaea HOM05D004828 ORTHO05D005713 8.6e-19 97.4 110 53.6
Actinidia11366 Actinidia chinensis HOM05D004828 ORTHO05D005713 4.7e-17 91.7 46 100.0
CDE04G3689 Ceratophyllum demersum HOM05D004828 ORTHO05D005713 1.5e-15 86.7 76 61.8
Nn1g09503 Nelumbo nucifera HOM05D004828 ORTHO05D005713 1.5e-15 86.7 71 60.6
PRCOL_00004079 Prasinoderma coloniale HOM05D004828 ORTHO05D005713 4.4e-15 85.1 91 50.5
Lalb_Chr03g0037001 Lupinus albus HOM05D004828 ORTHO05D005713 9.2e-13 77.4 65 56.9


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