Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G05540 Arabidopsis thaliana HOM05D008158 ORTHO05D010323 3.0e-43 178.7 136 100.0
BcaB08g34503 Brassica carinata HOM05D008158 ORTHO05D010323 1.8e-27 126.3 136 76.5
C03p55470 Brassica napus HOM05D008158 ORTHO05D010323 1.8e-27 126.3 136 70.6
A03p44640 Brassica napus HOM05D008158 ORTHO05D010323 3.9e-27 125.2 136 76.5
BcaC01g03159 Brassica carinata HOM05D008158 ORTHO05D010323 1.1e-26 123.6 136 75.7
Thhalv10002728m.g Eutrema salsugineum HOM05D008158 ORTHO05D010323 2.1e-20 102.8 136 70.6
CARHR103240 Cardamine hirsuta HOM05D008158 ORTHO05D010323 5.7e-18 94.7 128 68.8
THA.LOC104826607 Tarenaya hassleriana HOM05D008158 ORTHO05D010323 6.3e-17 91.3 136 64.0
BraA03t13597Z Brassica rapa HOM05D008158 ORTHO05D010323 6.7e-11 71.2 155 58.1
THA.LOC104826606 Tarenaya hassleriana HOM05D008158 ORTHO05D010323 6.7e-11 71.2 144 54.9
THA.LOC104815348 Tarenaya hassleriana HOM05D008158 ORTHO05D010323 2.2e-09 66.2 136 47.8
AL3G42960 Arabidopsis lyrata HOM05D008158 ORTHO05D010323 8.2e-09 64.3 130 56.9
Cc03_g08950 Coffea canephora HOM05D008132 ORTHO05D005763 1.1e-08 63.9 136 64.0
Medtr5g084330 Medicago truncatula HOM05D009657 ORTHO05D005763 1.8e-08 63.2 136 49.3
arahy.Tifrunner.gnm1.ann1.5E44W3 Arachis hypogaea HOM05D008132 ORTHO05D005763 9.1e-08 60.8 130 45.4
Cpa.g.sc132.70 Carica papaya HOM05D008132 ORTHO05D005763 1.5e-07 60.1 133 49.6
Cpa.g.sc132.73 Carica papaya HOM05D008132 ORTHO05D005763 1.5e-07 60.1 133 49.6
Sp3g24050 Schrenkiella parvula HOM05D008158 ORTHO05D010323 1.5e-07 60.1 129 54.3
EL10Ac9g22778 Beta vulgaris HOM05D008132 ORTHO05D005763 2.6e-07 59.3 129 57.4
Thhalv10017460m.g Eutrema salsugineum HOM05D008158 ORTHO05D010323 3.4e-07 58.9 129 48.1
Aa31LG1G19090 Aethionema arabicum HOM05D008158 ORTHO05D010323 7.7e-07 57.8 132 60.6
AT2G05530 Arabidopsis thaliana HOM05D008158 ORTHO05D010323 1.0e-06 57.4 128 56.2
Migut.G01096 Erythranthe guttata HOM05D008132 ORTHO05D005763 1.0e-06 57.4 130 60.0
BolC3t17822H Brassica oleracea HOM05D008158 ORTHO05D010323 1.3e-06 57.0 48 70.8
CiPaw.03G275800 Carya illinoinensis HOM05D052008 ORTHO05D005763 1.7e-06 56.6 146 36.3
Sopen09g035750 Solanum pennellii HOM05D012878 ORTHO05D005763 2.9e-06 55.8 134 56.7
Peaxi162Scf00286g00820 Petunia axillaris HOM05D008132 ORTHO05D005763 3.8e-06 55.5 126 38.9
C03p55460 Brassica napus HOM05D008158 ORTHO05D010323 6.5e-06 54.7 128 61.7
BolC3t17821H Brassica oleracea HOM05D008158 ORTHO05D010323 6.5e-06 54.7 128 61.7
Oeu022674.1 Olea europaea HOM05D008132 ORTHO05D005763 6.5e-06 54.7 131 54.2


User provided reference genes

Program Settings