Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G05530 Arabidopsis thaliana HOM05D008158 ORTHO05D010323 1.9e-38 162.5 116 100.0
AL3G42960 Arabidopsis lyrata HOM05D008158 ORTHO05D010323 2.2e-26 122.5 125 80.0
Thhalv10017460m.g Eutrema salsugineum HOM05D008158 ORTHO05D010323 1.7e-23 112.8 120 71.7
CARHR103210 Cardamine hirsuta HOM05D008158 ORTHO05D010323 2.2e-23 112.5 119 56.3
Carub.0003s2686 Capsella rubella HOM05D008158 ORTHO05D010323 9.4e-22 107.1 121 81.0
A04p23590 Brassica napus HOM05D008158 ORTHO05D010323 2.7e-21 105.5 119 73.1
AT2G05380 Arabidopsis thaliana HOM05D008158 ORTHO05D010323 1.8e-20 102.8 118 72.0
BraA04t17885Z Brassica rapa HOM05D008158 ORTHO05D010323 2.3e-20 102.4 119 72.3
Sp3g24030 Schrenkiella parvula HOM05D008158 ORTHO05D010323 6.8e-20 100.9 122 71.3
BcaB06g28391 Brassica carinata HOM05D008158 ORTHO05D010323 8.8e-20 100.5 119 73.9
AL3G42860 Arabidopsis lyrata HOM05D008158 ORTHO05D010323 1.5e-19 99.8 117 74.4
C04p60060 Brassica napus HOM05D008158 ORTHO05D010323 7.5e-19 97.4 119 73.9
BolC4t27509H Brassica oleracea HOM05D008158 ORTHO05D010323 7.5e-19 97.4 119 73.9
AL3G42950 Arabidopsis lyrata HOM05D008158 ORTHO05D010323 1.3e-18 96.7 154 63.6
BcaC01g03160 Brassica carinata HOM05D008158 ORTHO05D010323 1.3e-18 96.7 118 61.9
A03p44630 Brassica napus HOM05D008158 ORTHO05D010323 3.7e-18 95.1 148 56.1
C03p55460 Brassica napus HOM05D008158 ORTHO05D010323 8.3e-18 94.0 125 71.2
BolC3t17821H Brassica oleracea HOM05D008158 ORTHO05D010323 8.3e-18 94.0 125 71.2
AT2G05520 Arabidopsis thaliana HOM05D008158 ORTHO05D010323 1.1e-17 93.6 148 66.9
Sp3g24050 Schrenkiella parvula HOM05D008158 ORTHO05D010323 1.4e-17 93.2 120 70.8
BraA03t13598Z Brassica rapa HOM05D008158 ORTHO05D010323 3.1e-17 92.0 135 66.7
BcaB08g34502 Brassica carinata HOM05D008158 ORTHO05D010323 7.0e-17 90.9 142 66.2
CARHR103220 Cardamine hirsuta HOM05D008158 ORTHO05D010323 1.6e-16 89.7 118 75.4
Sp3g24040 Schrenkiella parvula HOM05D008158 ORTHO05D010323 2.7e-16 89.0 131 70.2
Carub.0003s2685 Capsella rubella HOM05D008158 ORTHO05D010323 4.5e-16 88.2 141 63.1
BraA03t13597Z Brassica rapa HOM05D008158 ORTHO05D010323 1.7e-15 86.3 141 64.5
BraA10t42972Z Brassica rapa HOM05D008158 ORTHO05D010323 2.9e-15 85.5 121 47.9
THA.LOC104826607 Tarenaya hassleriana HOM05D008158 ORTHO05D010323 5.0e-15 84.7 120 70.0
A10p08930 Brassica napus HOM05D008158 ORTHO05D010323 1.9e-14 82.8 121 47.1
CARHR103240 Cardamine hirsuta HOM05D008158 ORTHO05D010323 4.7e-13 78.2 119 57.1
Aa31LG1G19090 Aethionema arabicum HOM05D008158 ORTHO05D010323 8.0e-13 77.4 126 65.9
Carub.0003s2679 Capsella rubella HOM05D008158 ORTHO05D010323 8.0e-13 77.4 116 43.1
BcaB08g34503 Brassica carinata HOM05D008158 ORTHO05D010323 4.0e-12 75.1 121 67.8
BcaC01g03159 Brassica carinata HOM05D008158 ORTHO05D010323 5.2e-12 74.7 121 67.8
A03p44640 Brassica napus HOM05D008158 ORTHO05D010323 5.2e-12 74.7 121 67.8
C03p55470 Brassica napus HOM05D008158 ORTHO05D010323 2.0e-11 72.8 120 61.7
BolC9t55330H Brassica oleracea HOM05D008158 ORTHO05D010323 5.7e-11 71.2 121 41.3
THA.LOC104826606 Tarenaya hassleriana HOM05D008158 ORTHO05D010323 6.3e-10 67.8 126 59.5
THA.LOC104815348 Tarenaya hassleriana HOM05D008158 ORTHO05D010323 8.3e-10 67.4 113 62.8
Thhalv10002728m.g Eutrema salsugineum HOM05D008158 ORTHO05D010323 1.1e-09 67.0 114 64.0
EL10Ac9g22778 Beta vulgaris HOM05D008132 ORTHO05D005763 4.1e-09 65.1 121 58.7
Sp3g23960 Schrenkiella parvula HOM05D008158 ORTHO05D010323 9.1e-09 63.9 51 74.5
AL3G42940 Arabidopsis lyrata HOM05D008158 ORTHO05D010323 7.7e-08 60.8 49 71.4
A07p06140 Brassica napus HOM05D008158 ORTHO05D010323 7.7e-08 60.8 47 70.2
AL3G42930 Arabidopsis lyrata HOM05D008158 ORTHO05D010323 1.7e-07 59.7 47 74.5
AL3G43030 Arabidopsis lyrata HOM05D008158 ORTHO05D010323 2.9e-07 58.9 49 71.4
C07p09670 Brassica napus HOM05D008158 ORTHO05D010323 2.9e-07 58.9 47 70.2
BolC7t41408H Brassica oleracea HOM05D008158 ORTHO05D010323 2.9e-07 58.9 47 70.2
AT2G05440 Arabidopsis thaliana HOM05D008158 ORTHO05D010323 3.8e-07 58.5 47 72.3
AT2G05540 Arabidopsis thaliana HOM05D008158 ORTHO05D010323 3.8e-07 58.5 128 56.2
BcaC04g22045 Brassica carinata HOM05D008158 ORTHO05D010323 3.8e-07 58.5 96 40.6
CARHR103190 Cardamine hirsuta HOM05D008158 ORTHO05D010323 3.8e-07 58.5 48 72.9
BcaC01g03162 Brassica carinata HOM05D008158 ORTHO05D010323 5.0e-07 58.2 51 68.6
C07p09690 Brassica napus HOM05D008158 ORTHO05D010323 5.0e-07 58.2 57 59.6
Carub.0003s2677 Capsella rubella HOM05D008158 ORTHO05D010323 6.6e-07 57.8 110 40.9
Carub.0003s2682 Capsella rubella HOM05D008158 ORTHO05D010323 8.6e-07 57.4 50 70.0
EL10Ac9g22777 Beta vulgaris HOM05D008132 ORTHO05D005763 1.9e-06 56.2 27 77.8
AT2G05510 Arabidopsis thaliana HOM05D008158 ORTHO05D010323 7.2e-06 54.3 46 69.6
Thhalv10003123m.g Eutrema salsugineum HOM05D008158 ORTHO05D010323 9.5e-06 53.9 46 71.7


User provided reference genes

Program Settings