Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G05520 Arabidopsis thaliana HOM05D008158 ORTHO05D010323 2.1e-34 149.4 146 100.0
AL3G42950 Arabidopsis lyrata HOM05D008158 ORTHO05D010323 1.3e-23 113.6 154 83.8
AL3G42960 Arabidopsis lyrata HOM05D008158 ORTHO05D010323 3.1e-22 109.0 146 69.2
Thhalv10017460m.g Eutrema salsugineum HOM05D008158 ORTHO05D010323 7.2e-19 97.8 149 57.7
AL3G42860 Arabidopsis lyrata HOM05D008158 ORTHO05D010323 2.7e-18 95.9 148 63.5
AT2G05380 Arabidopsis thaliana HOM05D008158 ORTHO05D010323 4.7e-18 95.1 148 61.5
BcaB08g34502 Brassica carinata HOM05D008158 ORTHO05D010323 8.0e-18 94.4 147 76.9
A03p44630 Brassica napus HOM05D008158 ORTHO05D010323 1.0e-17 94.0 147 73.5
AT2G05530 Arabidopsis thaliana HOM05D008158 ORTHO05D010323 1.4e-17 93.6 148 66.9
BraA03t13598Z Brassica rapa HOM05D008158 ORTHO05D010323 1.8e-17 93.2 147 74.1
BcaC01g03160 Brassica carinata HOM05D008158 ORTHO05D010323 6.7e-17 91.3 147 52.4
C03p55460 Brassica napus HOM05D008158 ORTHO05D010323 6.7e-17 91.3 147 66.7
BolC3t17821H Brassica oleracea HOM05D008158 ORTHO05D010323 6.7e-17 91.3 147 66.7
CARHR103210 Cardamine hirsuta HOM05D008158 ORTHO05D010323 8.8e-17 90.9 148 42.6
Carub.0003s2686 Capsella rubella HOM05D008158 ORTHO05D010323 2.6e-16 89.4 146 68.5
Sp3g24050 Schrenkiella parvula HOM05D008158 ORTHO05D010323 1.7e-15 86.7 149 59.1
Carub.0003s2685 Capsella rubella HOM05D008158 ORTHO05D010323 3.7e-15 85.5 148 73.0
Sp3g24030 Schrenkiella parvula HOM05D008158 ORTHO05D010323 1.4e-14 83.6 159 53.5
BraA04t17885Z Brassica rapa HOM05D008158 ORTHO05D010323 2.4e-14 82.8 148 58.8
Sp3g24040 Schrenkiella parvula HOM05D008158 ORTHO05D010323 3.1e-14 82.4 146 76.0
A04p23590 Brassica napus HOM05D008158 ORTHO05D010323 5.3e-14 81.6 148 58.8
C04p60060 Brassica napus HOM05D008158 ORTHO05D010323 5.3e-14 81.6 149 57.7
BolC4t27509H Brassica oleracea HOM05D008158 ORTHO05D010323 5.3e-14 81.6 149 57.7
BcaB06g28391 Brassica carinata HOM05D008158 ORTHO05D010323 4.5e-13 78.6 154 55.2
BraA03t13597Z Brassica rapa HOM05D008158 ORTHO05D010323 1.5e-11 73.6 147 76.9
THA.LOC104826607 Tarenaya hassleriana HOM05D008158 ORTHO05D010323 3.2e-11 72.4 150 61.3
CARHR103220 Cardamine hirsuta HOM05D008158 ORTHO05D010323 5.5e-11 71.6 146 61.6
Aa31LG1G19090 Aethionema arabicum HOM05D008158 ORTHO05D010323 2.1e-10 69.7 146 67.1
BraA10t42972Z Brassica rapa HOM05D008158 ORTHO05D010323 2.7e-10 69.3 151 39.1
A10p08930 Brassica napus HOM05D008158 ORTHO05D010323 1.8e-09 66.6 151 38.4
CARHR103240 Cardamine hirsuta HOM05D008158 ORTHO05D010323 3.0e-09 65.9 146 48.6
Thhalv10002728m.g Eutrema salsugineum HOM05D008158 ORTHO05D010323 4.4e-08 62.0 30 86.7
THA.LOC104815348 Tarenaya hassleriana HOM05D008158 ORTHO05D010323 1.3e-07 60.5 31 77.4
Carub.0003s2679 Capsella rubella HOM05D008158 ORTHO05D010323 1.7e-07 60.1 146 33.6
BcaB08g34503 Brassica carinata HOM05D008158 ORTHO05D010323 2.2e-07 59.7 144 56.2
BcaC01g03159 Brassica carinata HOM05D008158 ORTHO05D010323 2.2e-07 59.7 149 56.4
A03p44640 Brassica napus HOM05D008158 ORTHO05D010323 2.8e-07 59.3 149 56.4
C03p55470 Brassica napus HOM05D008158 ORTHO05D010323 2.8e-07 59.3 149 51.0
BolC9t55330H Brassica oleracea HOM05D008158 ORTHO05D010323 3.7e-07 58.9 146 30.8
EL10Ac9g22777 Beta vulgaris HOM05D008132 ORTHO05D005763 1.1e-06 57.4 28 78.6
BcaC04g22045 Brassica carinata HOM05D008158 ORTHO05D010323 1.1e-06 57.4 34 67.6
THA.LOC104826606 Tarenaya hassleriana HOM05D008158 ORTHO05D010323 1.1e-06 57.4 143 54.5
Carub.0003s2682 Capsella rubella HOM05D008158 ORTHO05D010323 3.1e-06 55.8 50 68.0
Thhalv10002748m.g Eutrema salsugineum HOM05D008158 ORTHO05D010323 3.1e-06 55.8 53 64.2
EL10Ac9g22778 Beta vulgaris HOM05D008132 ORTHO05D005763 9.1e-06 54.3 26 80.8


User provided reference genes

Program Settings