Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G05440 Arabidopsis thaliana HOM05D008158 ORTHO05D010323 4.8e-21 105.1 155 100.0
AL3G42930 Arabidopsis lyrata HOM05D008158 ORTHO05D010323 1.8e-15 86.7 60 95.0
AL3G42940 Arabidopsis lyrata HOM05D008158 ORTHO05D010323 1.9e-14 83.2 47 93.6
AL3G43030 Arabidopsis lyrata HOM05D008158 ORTHO05D010323 7.4e-14 81.3 47 93.6
Carub.0003s2682 Capsella rubella HOM05D008158 ORTHO05D010323 6.3e-13 78.2 48 89.6
AT2G05510 Arabidopsis thaliana HOM05D008158 ORTHO05D010323 1.1e-12 77.4 46 91.3
Carub.0003s2683 Capsella rubella HOM05D008158 ORTHO05D010323 2.4e-12 76.3 44 90.9
Thhalv10003123m.g Eutrema salsugineum HOM05D008158 ORTHO05D010323 8.5e-10 67.8 46 80.4
BcaB08g34501 Brassica carinata HOM05D008158 ORTHO05D010323 4.2e-09 65.5 49 75.5
Sp3g23960 Schrenkiella parvula HOM05D008158 ORTHO05D010323 7.2e-09 64.7 49 73.5
C03p55450 Brassica napus HOM05D008158 ORTHO05D010323 9.4e-09 64.3 49 73.5
A03p44620 Brassica napus HOM05D008158 ORTHO05D010323 1.2e-08 63.9 49 73.5
BraA03t13597Z Brassica rapa HOM05D008158 ORTHO05D010323 1.2e-08 63.9 49 73.5
BolC3t17820H Brassica oleracea HOM05D008158 ORTHO05D010323 4.6e-08 62.0 49 71.4
BcaC01g03162 Brassica carinata HOM05D008158 ORTHO05D010323 6.1e-08 61.6 49 71.4
CARHR103190 Cardamine hirsuta HOM05D008158 ORTHO05D010323 6.1e-08 61.6 48 72.9
Sp3g23980 Schrenkiella parvula HOM05D008158 ORTHO05D371579 1.8e-07 60.1 48 70.8
Sp3g24030 Schrenkiella parvula HOM05D008158 ORTHO05D010323 2.3e-07 59.7 46 71.7
Sp3g24050 Schrenkiella parvula HOM05D008158 ORTHO05D010323 2.3e-07 59.7 48 75.0
Carub.0003s2684 Capsella rubella HOM05D008158 ORTHO05D010323 3.0e-07 59.3 47 70.2
Sp3g24040 Schrenkiella parvula HOM05D008158 ORTHO05D010323 3.9e-07 58.9 48 70.8
AT2G05530 Arabidopsis thaliana HOM05D008158 ORTHO05D010323 6.7e-07 58.2 47 72.3
CARHR103130 Cardamine hirsuta HOM05D008158 ORTHO05D010323 8.8e-07 57.8 47 70.2
Thhalv10017460m.g Eutrema salsugineum HOM05D008158 ORTHO05D010323 1.1e-06 57.4 48 72.9
AL3G42960 Arabidopsis lyrata HOM05D008158 ORTHO05D010323 1.5e-06 57.0 47 72.3
AL3G42950 Arabidopsis lyrata HOM05D008158 ORTHO05D010323 3.3e-06 55.8 47 70.2
A07p06140 Brassica napus HOM05D008158 ORTHO05D010323 4.3e-06 55.5 47 66.0
A03p44630 Brassica napus HOM05D008158 ORTHO05D010323 7.4e-06 54.7 46 63.0
BraA03t13598Z Brassica rapa HOM05D008158 ORTHO05D010323 9.7e-06 54.3 46 63.0
BraA04t17885Z Brassica rapa HOM05D008158 ORTHO05D010323 9.7e-06 54.3 48 66.7


User provided reference genes

Program Settings