Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G04845 Arabidopsis thaliana HOM05D007219 ORTHO05D008995 2.4e-119 432.2 219 100.0
AL3G42440 Arabidopsis lyrata HOM05D007219 ORTHO05D008995 1.0e-109 400.2 215 93.5
Carub.0003s2645 Capsella rubella HOM05D007219 ORTHO05D008995 3.3e-108 395.2 218 91.7
Sp3g23430 Schrenkiella parvula HOM05D007219 ORTHO05D008995 3.4e-105 385.2 214 90.7
CARHR102840 Cardamine hirsuta HOM05D007219 ORTHO05D008995 4.9e-104 381.3 209 90.9
Thhalv10002661m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 6.0e-102 374.4 215 86.0
BolC3t17801H Brassica oleracea HOM05D007219 ORTHO05D008995 2.4e-95 352.4 207 83.1
Aa31LG1G4150 Aethionema arabicum HOM05D002708 ORTHO05D003516 6.2e-91 337.8 197 85.3
THA.LOC104826618 Tarenaya hassleriana HOM05D007219 ORTHO05D008995 3.8e-88 328.6 213 77.0
TAR626G0546 Trochodendron aralioides HOM05D007219 ORTHO05D008995 9.9e-81 303.9 194 75.3
Cpa.g.sc395.3 Carica papaya HOM05D007219 ORTHO05D008995 4.6e-78 295.0 193 74.1
Prupe.3G202800 Prunus persica HOM05D007219 ORTHO05D008995 6.0e-78 294.7 193 73.1
GSVIVG01030037001 Vitis vinifera HOM05D007219 ORTHO05D008995 7.9e-78 294.3 193 72.5
Thecc.01G189100 Theobroma cacao HOM05D007219 ORTHO05D008995 1.9e-76 289.7 193 72.5
Duzib138G0301 Durio zibethinus HOM05D007219 ORTHO05D008995 2.5e-76 289.3 193 72.0
QL08p028873 Quercus lobata HOM05D007219 ORTHO05D008995 1.3e-75 287.0 193 71.0
Gorai.001G193200 Gossypium raimondii HOM05D007219 ORTHO05D008995 4.8e-75 285.0 192 72.4
Gohir.A07G167500 Gossypium hirsutum HOM05D007219 ORTHO05D008995 6.2e-75 284.6 192 72.4
RcHm_v2.0_Chr2g0156861 Rosa chinensis HOM05D007219 ORTHO05D008995 6.2e-75 284.6 194 70.6
Gohir.D07G173000 Gossypium hirsutum HOM05D007219 ORTHO05D008995 1.4e-74 283.5 192 71.9
Nn1g03266 Nelumbo nucifera HOM05D007219 ORTHO05D008995 1.8e-74 283.1 187 70.6
Atru.chr6.3346 Acer truncatum HOM05D007219 ORTHO05D008995 2.4e-74 282.7 193 72.5
FvH4_6g41300 Fragaria vesca HOM05D007219 ORTHO05D008995 2.4e-74 282.7 193 70.5
Dinv05845 Davidia involucrata HOM05D007219 ORTHO05D008995 3.1e-74 282.3 187 72.2
Potri.014G161800 Populus trichocarpa HOM05D007219 ORTHO05D008995 3.1e-74 282.3 192 71.4
Lj6g0005071 Lotus japonicus HOM05D007219 ORTHO05D008995 4.0e-74 282.0 193 68.9
vmacro12114 Vaccinium macrocarpon HOM05D007219 ORTHO05D008995 5.3e-74 281.6 193 69.9
Cc07_g19250 Coffea canephora HOM05D007219 ORTHO05D008995 6.9e-74 281.2 193 70.5
CSS0025035 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 9.0e-74 280.8 193 69.9
CANSAT64G0298 Cannabis sativa HOM05D007219 ORTHO05D008995 9.0e-74 280.8 192 70.3
Hund24148 Selenicereus undatus HOM05D007219 ORTHO05D008995 9.0e-74 280.8 187 72.7
TWI36G0002 Tripterygium wilfordii HOM05D007219 ORTHO05D008995 9.0e-74 280.8 194 70.1
FAN14G1895 Fragaria x ananassa HOM05D007219 ORTHO05D008995 1.2e-73 280.4 193 69.9
MD09G1120700 Malus domestica HOM05D007219 ORTHO05D008995 2.0e-73 279.6 198 69.7
CAN.G716.12 Capsicum annuum HOM05D007219 ORTHO05D008995 1.3e-72 276.9 194 67.5
Glyma.13G025700 Glycine max HOM05D007219 ORTHO05D008995 1.3e-72 276.9 193 68.4
Manes.12G083700 Manihot esculenta HOM05D007219 ORTHO05D008995 1.3e-72 276.9 197 70.6
Peaxi162Scf00147g01822 Petunia axillaris HOM05D007219 ORTHO05D008995 1.3e-72 276.9 194 68.0
Sopen05g025870 Solanum pennellii HOM05D007219 ORTHO05D008995 2.9e-72 275.8 194 67.5
CsaV3_7G002720 Cucumis sativus L. HOM05D007219 ORTHO05D008995 3.8e-72 275.4 192 69.8
Eucgr.K00659 Eucalyptus grandis HOM05D007219 ORTHO05D008995 4.9e-72 275.0 193 70.5
Migut.M00020 Erythranthe guttata HOM05D007219 ORTHO05D008995 8.4e-72 274.2 194 67.5
Medtr3g083200 Medicago truncatula HOM05D007219 ORTHO05D008995 8.4e-72 274.2 193 67.9
Psat5g102680 Pisum sativum HOM05D007219 ORTHO05D008995 1.4e-71 273.5 193 66.3
Hma1.2p1_0133F.1_g061230 Hydrangea macrophylla HOM05D007219 ORTHO05D008995 3.2e-71 272.3 193 66.3
arahy.Tifrunner.gnm1.ann1.N6EW4G Arachis hypogaea HOM05D007219 ORTHO05D008995 7.1e-71 271.2 200 65.0
Phvul.006G013300 Phaseolus vulgaris HOM05D007219 ORTHO05D008995 1.2e-70 270.4 193 66.3
SalBow7G0564 Salvia bowleyana HOM05D007219 ORTHO05D008995 1.2e-70 270.4 192 68.2
TPR.G19322 Trifolium pratense HOM05D007219 ORTHO05D008995 1.6e-70 270.0 193 66.8
Lalb_Chr22g0360881 Lupinus albus HOM05D007219 ORTHO05D008995 2.1e-70 269.6 195 65.1
Nitab4.5_0011106g0020 Nicotiana tabacum HOM05D007219 ORTHO05D008995 2.1e-70 269.6 194 68.0
Aqoxy1G04023 Aquilegia oxysepala HOM05D007219 ORTHO05D008995 4.6e-70 268.5 192 66.7
Lsat_1_v5_gn_5_121560 Lactuca sativa HOM05D007219 ORTHO05D008995 4.6e-70 268.5 194 65.5
PGR142G0267 Punica granatum HOM05D007219 ORTHO05D008995 6.0e-70 268.1 191 68.1
Sed0018447 Sechium edule HOM05D007219 ORTHO05D008995 3.0e-69 265.8 169 76.3
PGSC0003DMG400020758 Solanum tuberosum HOM05D007219 ORTHO05D008995 3.9e-69 265.4 170 73.5
ATR0712G058 Amborella trichopoda HOM05D007219 ORTHO05D008995 8.7e-69 264.2 196 65.8
PSO302G0207 Papaver somniferum HOM05D007219 ORTHO05D008995 1.9e-68 263.1 179 69.8
ECA234G4660 Erigeron canadensis HOM05D007219 ORTHO05D008995 2.5e-68 262.7 193 64.2
Oeu029809.1 Olea europaea HOM05D007219 ORTHO05D008995 2.5e-68 262.7 194 64.9
MSTRG.14930 Avicennia marina HOM05D007219 ORTHO05D008995 1.6e-67 260.0 193 65.3
CDE10G1006 Ceratophyllum demersum HOM05D007219 ORTHO05D008995 8.1e-67 257.7 179 68.2
DCAR_019229 Daucus carota HOM05D007219 ORTHO05D008995 1.4e-66 256.9 183 68.3
HanXRQChr12g0373931 Helianthus annuus HOM05D007219 ORTHO05D008995 1.4e-66 256.9 186 65.1
CiPaw.03G278000 Carya illinoinensis HOM05D007219 ORTHO05D008995 1.8e-66 256.5 192 66.1
Haze_12702 Corylus avellana HOM05D007219 ORTHO05D008995 3.1e-66 255.8 187 67.4
Actinidia07878 Actinidia chinensis HOM05D007219 ORTHO05D008995 2.0e-65 253.1 168 72.6
AUR62017530 Chenopodium quinoa HOM05D007219 ORTHO05D008995 1.0e-64 250.8 254 52.4
MELO3C024213.2 Cucumis melo HOM05D007219 ORTHO05D008995 1.4e-63 246.9 192 64.6
HPP92_020392 Vanilla planifolia HOM05D007219 ORTHO05D008995 1.4e-63 246.9 173 68.2
Duzib133G0547 Durio zibethinus HOM05D007219 ORTHO05D008995 1.9e-63 246.5 187 65.8
Os03g0194400 Oryza sativa ssp. japonica HOM05D007219 ORTHO05D008995 3.9e-61 238.8 178 66.3
Sabra14G0123400 Salix brachista HOM05D007219 ORTHO05D008995 1.1e-60 237.3 266 50.4
Ciclev10016673m.g Citrus clementina HOM05D007219 ORTHO05D008995 1.9e-60 236.5 154 74.0
COL.COLO4_04268 Corchorus olitorius HOM05D007219 ORTHO05D008995 1.6e-59 233.4 171 66.1
FAN05G4854 Fragaria x ananassa HOM05D007219 ORTHO05D008995 1.1e-58 230.7 199 61.3
MBI16_g42309_MAGBIO Magnolia biondii HOM05D007219 ORTHO05D008995 6.9e-58 228.0 170 68.2
arahy.Tifrunner.gnm1.ann1.E78GDQ Arachis hypogaea HOM05D007219 ORTHO05D008995 1.7e-56 223.4 326 40.5
arahy.Tifrunner.gnm1.ann1.XZ9N91 Arachis hypogaea HOM05D007219 ORTHO05D008995 1.7e-56 223.4 326 40.5
Dinv07849 Davidia involucrata HOM05D007219 ORTHO05D008995 3.8e-56 222.2 143 72.7
EL10Ac9g22747 Beta vulgaris HOM05D007219 ORTHO05D008995 2.5e-55 219.5 193 57.5
QL08p028923 Quercus lobata HOM05D007219 ORTHO05D008995 1.3e-53 213.8 342 38.9
SGA_v2.0_scaffold73G24522 Striga asiatica HOM05D007219 ORTHO05D008995 8.7e-53 211.1 168 63.1
Zm00001eb401150 Zea mays HOM05D007219 ORTHO05D008995 3.3e-52 209.1 150 65.3
SMO115G0308 Selaginella moellendorffii HOM05D007219 ORTHO05D008995 2.2e-51 206.5 178 59.0
Mapoly0089s0028 Marchantia polymorpha HOM05D007219 ORTHO05D008995 1.5e-49 200.3 170 57.1
FAN02G0754 Fragaria x ananassa HOM05D007219 ORTHO05D008995 3.9e-45 185.7 193 51.8
Ah.14g082820 Amaranthus hybridus HOM05D007219 ORTHO05D008995 1.1e-44 184.1 135 65.2
AUR62015074 Chenopodium quinoa HOM05D007219 ORTHO05D008995 4.4e-44 182.2 136 64.0
ClCG02G002620 Citrullus lanatus HOM05D007219 ORTHO05D008995 9.7e-44 181.0 139 63.3
Sc21g0000880 Simmondsia chinensis HOM05D007219 ORTHO05D008995 2.8e-43 179.5 110 72.7
VMungo0540G0477 Vigna mungo HOM05D007219 ORTHO05D008995 1.2e-41 174.1 198 47.5
Ca_16365_v3 Cicer arietinum L. HOM05D007219 ORTHO05D008995 5.9e-41 171.8 121 67.8
Cfa014252 Carpinus fangiana HOM05D007219 ORTHO05D008995 6.5e-40 168.3 133 60.2
MCO15G116 Micromonas commoda HOM05D007219 ORTHO05D008995 3.6e-38 162.5 175 51.4
Rhsim06G0172900 Rhododendron simsii HOM05D007219 ORTHO05D008995 1.6e-33 147.1 253 40.3
CBR_g31837 Chara braunii HOM05D007219 ORTHO05D008995 2.0e-33 146.7 269 32.7
Thhalv10003074m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 2.7e-30 136.3 123 61.8
Nitab4.5_0002877g0050 Nicotiana tabacum HOM05D007219 ORTHO05D008995 5.2e-29 132.1 91 71.4
MD17G1111700 Malus domestica HOM05D007219 ORTHO05D008995 4.4e-28 129.0 114 57.0
SEGI_01956 Sequoiadendron giganteum HOM05D007219 ORTHO05D008995 4.1e-26 122.5 82 65.9
AagrBONN_evm.TU.Sc2ySwM_362.1409 Anthoceros agrestis HOM05D007219 ORTHO05D008995 5.7e-20 102.1 128 45.3
CSS0035148 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 5.7e-20 102.1 83 63.9
PRCOL_00004041 Prasinoderma coloniale HOM05D007219 ORTHO05D008995 1.4e-18 97.4 164 38.4
MD17G1111600 Malus domestica HOM05D007219 ORTHO05D008995 4.7e-14 82.4 75 57.3
Actinidia09773 Actinidia chinensis HOM05D007219 ORTHO05D008995 4.0e-13 79.3 55 65.5
Cre03.g184151 Chlamydomonas reinhardtii HOM05D007219 ORTHO05D008995 4.9e-11 72.4 110 39.1
Oeu027288.1 Olea europaea HOM05D007219 ORTHO05D008995 4.5e-09 65.9 51 64.7
CSS0021882 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.6e-07 58.9 34 73.5
CSS0030489 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 9.5e-07 58.2 37 64.9


User provided reference genes

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