Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G04360 Arabidopsis thaliana HOM05D006836 ORTHO05D008691 7.2e-150 533.9 266 100.0
Carub.0003s2604 Capsella rubella HOM05D006836 ORTHO05D008691 9.7e-123 443.7 267 84.3
AL3G42030 Arabidopsis lyrata HOM05D006836 ORTHO05D008691 2.0e-120 436.0 269 82.9
CARHR102220 Cardamine hirsuta HOM05D006836 ORTHO05D008691 1.2e-117 426.8 266 82.7
BcaB06g26781 Brassica carinata HOM05D006836 ORTHO05D008691 1.1e-110 403.7 272 75.7
Sp3g23200 Schrenkiella parvula HOM05D006836 ORTHO05D008691 2.8e-109 399.1 271 77.5
Thhalv10002607m.g Eutrema salsugineum HOM05D006836 ORTHO05D008691 4.0e-108 395.2 273 75.8
BcaC06g35865 Brassica carinata HOM05D006836 ORTHO05D008691 1.5e-107 393.3 273 75.8
BolC7t41479H Brassica oleracea HOM05D006836 ORTHO05D008691 1.5e-107 393.3 273 75.8
C07p10290 Brassica napus HOM05D006836 ORTHO05D008691 7.5e-107 391.0 273 75.5
BraA07t28465Z Brassica rapa HOM05D006836 ORTHO05D008691 9.2e-105 384.0 273 74.4
A07p06710 Brassica napus HOM05D006836 ORTHO05D008691 2.0e-104 382.9 268 73.9
THA.LOC104808842 Tarenaya hassleriana HOM05D006836 ORTHO05D008691 1.6e-85 320.1 283 60.8
Gohir.A07G192900 Gossypium hirsutum HOM05D006836 ORTHO05D008691 2.7e-80 302.8 281 57.7
Thecc.01G198300 Theobroma cacao HOM05D006836 ORTHO05D008691 3.9e-79 298.9 280 58.2
Gohir.D07G199300 Gossypium hirsutum HOM05D006836 ORTHO05D008691 6.6e-79 298.1 281 56.6
Gorai.001G223100 Gossypium raimondii HOM05D006836 ORTHO05D008691 8.6e-79 297.7 281 56.6
GSVIVG01030118001 Vitis vinifera HOM05D006836 ORTHO05D008691 8.1e-77 291.2 277 56.0
RcHm_v2.0_Chr2g0155731 Rosa chinensis HOM05D006836 ORTHO05D008691 1.4e-76 290.4 282 52.5
Manes.13G060700 Manihot esculenta HOM05D006836 ORTHO05D008691 5.2e-76 288.5 281 54.8
CANSAT64G2876 Cannabis sativa HOM05D006836 ORTHO05D008691 1.2e-75 287.3 288 54.2
Duzib133G0147 Durio zibethinus HOM05D006836 ORTHO05D008691 1.2e-75 287.3 283 54.8
Aa31sc202G50 Aethionema arabicum HOM05D006836 ORTHO05D008691 1.5e-75 287.0 223 66.8
Ciclev10015848m.g Citrus clementina HOM05D006836 ORTHO05D008691 1.4e-73 280.4 289 52.6
FvH4_6g40480 Fragaria vesca HOM05D006836 ORTHO05D008691 1.2e-72 277.3 282 50.4
Lj6g0007987 Lotus japonicus HOM05D006836 ORTHO05D008691 2.1e-72 276.6 279 53.0
CiPaw.03G283000 Carya illinoinensis HOM05D006836 ORTHO05D008691 4.6e-72 275.4 287 50.9
DCAR_012739 Daucus carota HOM05D006836 ORTHO05D008691 7.8e-72 274.6 277 53.1
Lalb_Chr10g0094621 Lupinus albus HOM05D006836 ORTHO05D008691 1.0e-71 274.2 282 51.1
Potri.014G169200 Populus trichocarpa HOM05D006836 ORTHO05D008691 2.3e-71 273.1 273 53.8
Rhsim06G0178100 Rhododendron simsii HOM05D006836 ORTHO05D008691 2.3e-71 273.1 283 51.9
arahy.Tifrunner.gnm1.ann1.GSTV0Y Arachis hypogaea HOM05D006836 ORTHO05D008691 3.0e-71 272.7 285 51.9
QL04p067653 Quercus lobata HOM05D006836 ORTHO05D008691 6.6e-71 271.6 288 51.4
arahy.Tifrunner.gnm1.ann1.M09JG2 Arachis hypogaea HOM05D006836 ORTHO05D008691 1.5e-70 270.4 285 51.6
MD09G1129600 Malus domestica HOM05D006836 ORTHO05D008691 1.5e-70 270.4 277 50.5
Dinv21313 Davidia involucrata HOM05D006836 ORTHO05D008691 5.6e-70 268.5 285 51.2
PSO541G5262 Papaver somniferum HOM05D006836 ORTHO05D008691 1.2e-69 267.3 294 49.7
Actinidia09801 Actinidia chinensis HOM05D006836 ORTHO05D008691 1.6e-69 266.9 285 50.2
Cfa014210 Carpinus fangiana HOM05D006836 ORTHO05D008691 1.6e-69 266.9 312 47.8
Eucgr.K01397 Eucalyptus grandis HOM05D006836 ORTHO05D008691 3.6e-69 265.8 211 59.7
Ca_16339_v3 Cicer arietinum L. HOM05D006836 ORTHO05D008691 4.7e-69 265.4 272 52.2
TPR.G16170 Trifolium pratense HOM05D006836 ORTHO05D008691 4.7e-69 265.4 261 52.9
Nitab4.5_0004852g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 1.1e-68 264.2 292 51.7
CSS0020520 Camellia sinensis var. sinensis HOM05D006836 ORTHO05D008691 1.4e-68 263.8 289 50.2
TWI75G1319 Tripterygium wilfordii HOM05D006836 ORTHO05D008691 1.4e-68 263.8 273 52.0
Phvul.L001691 Phaseolus vulgaris HOM05D006836 ORTHO05D008691 3.1e-68 262.7 254 53.9
vmacro12068 Vaccinium macrocarpon HOM05D006836 ORTHO05D008691 3.1e-68 262.7 289 50.9
Glyma.13G010200 Glycine max HOM05D006836 ORTHO05D008691 6.9e-68 261.5 212 59.9
VMungo0647G0281 Vigna mungo HOM05D006836 ORTHO05D008691 6.9e-68 261.5 254 53.9
Glyma.20G060000 Glycine max HOM05D006836 ORTHO05D008691 1.5e-67 260.4 211 60.2
MBI14_g24036_MAGBIO Magnolia biondii HOM05D006836 ORTHO05D008691 2.0e-67 260.0 283 50.5
Sabra14G0129000 Salix brachista HOM05D006836 ORTHO05D008691 2.0e-67 260.0 296 47.6
TAR629G0496 Trochodendron aralioides HOM05D006836 ORTHO05D008691 2.6e-67 259.6 291 48.8
ClCG02G009110 Citrullus lanatus HOM05D006836 ORTHO05D008691 3.4e-67 259.2 184 65.2
Migut.M00056 Erythranthe guttata HOM05D006836 ORTHO05D008691 4.4e-67 258.8 288 49.7
Aqoxy1G03080 Aquilegia oxysepala HOM05D006836 ORTHO05D008691 5.8e-67 258.5 249 53.8
PSO675G1370 Papaver somniferum HOM05D006836 ORTHO05D008691 1.7e-66 256.9 294 49.0
Hund15463 Selenicereus undatus HOM05D006836 ORTHO05D008691 2.2e-66 256.5 278 50.7
PGR031G1777 Punica granatum HOM05D006836 ORTHO05D008691 2.9e-66 256.1 284 50.4
Sc21g0000470 Simmondsia chinensis HOM05D006836 ORTHO05D008691 3.8e-66 255.8 265 52.1
Solyc07g045300.4 Solanum lycopersicum HOM05D006836 ORTHO05D008691 3.8e-66 255.8 283 49.8
Psat5g104760 Pisum sativum HOM05D006836 ORTHO05D008691 4.9e-66 255.4 267 51.3
Sopen07g023830 Solanum pennellii HOM05D006836 ORTHO05D008691 3.2e-65 252.7 181 65.7
Haze_12601 Corylus avellana HOM05D006836 ORTHO05D008691 4.2e-65 252.3 324 45.7
Oeu037218.2 Olea europaea HOM05D000879 ORTHO05D008691 5.4e-65 251.9 184 62.0
Peaxi162Scf00612g00142 Petunia axillaris HOM05D006836 ORTHO05D008691 5.4e-65 251.9 171 67.8
PGSC0003DMG400017381 Solanum tuberosum HOM05D006836 ORTHO05D008691 5.4e-65 251.9 181 64.6
Nn1g07540 Nelumbo nucifera HOM05D006836 ORTHO05D008691 7.1e-65 251.5 293 48.8
MELO3C025942.2 Cucumis melo HOM05D006836 ORTHO05D008691 1.2e-64 250.8 275 49.1
SGA_v2.0_scaffold73G24492 Striga asiatica HOM05D006836 ORTHO05D008691 1.6e-64 250.4 286 46.2
Sed0023251 Sechium edule HOM05D006836 ORTHO05D008691 2.1e-64 250.0 181 64.1
COL.COLO4_19642 Corchorus olitorius HOM05D006836 ORTHO05D008691 6.0e-64 248.4 236 56.4
CsaV3_6G009720 Cucumis sativus L. HOM05D006836 ORTHO05D008691 2.5e-62 243.0 182 62.1
SEGI_40154 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 4.3e-62 242.3 209 54.1
Zm00001eb176810 Zea mays HOM05D006836 ORTHO05D008691 4.3e-62 242.3 181 61.3
Os08g0345400 Oryza sativa ssp. japonica HOM05D006836 ORTHO05D008691 5.6e-62 241.9 181 60.8
Nitab4.5_0005354g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 1.3e-61 240.7 287 47.4
EL10Ac9g22661 Beta vulgaris HOM05D006836 ORTHO05D008691 2.1e-61 240.0 284 50.0
MSTRG.14912 Avicennia marina HOM05D006836 ORTHO05D008691 8.1e-61 238.0 290 45.2
Prupe.3G195700 Prunus persica HOM05D006836 ORTHO05D008691 8.1e-61 238.0 240 53.8
AUR62014994 Chenopodium quinoa HOM05D006836 ORTHO05D008691 1.1e-60 237.7 278 49.6
unitig_62.g23534 Utricularia gibba HOM05D000211 ORTHO05D002682 2.4e-60 236.5 296 44.9
Medtr3g082680 Medicago truncatula HOM05D006836 ORTHO05D008691 5.3e-60 235.3 175 62.9
Cpa.g.sc136.39 Carica papaya HOM05D006836 ORTHO05D008691 5.8e-59 231.9 257 50.6
Ah.01g002500 Amaranthus hybridus HOM05D006836 ORTHO05D008691 2.2e-58 229.9 277 50.2
FAN02G3194 Fragaria x ananassa HOM05D006836 ORTHO05D008691 4.9e-58 228.8 239 50.6
Cc00_g01020 Coffea canephora HOM05D006836 ORTHO05D008691 2.7e-56 223.0 215 50.2
FAN10G4054 Fragaria x ananassa HOM05D006836 ORTHO05D008691 2.3e-55 219.9 303 41.6
FAN14G0130 Fragaria x ananassa HOM05D006836 ORTHO05D008691 2.3e-55 219.9 303 41.6
ATR0751G245 Amborella trichopoda HOM05D006836 ORTHO05D008691 3.9e-55 219.2 166 62.7
AUR62029127 Chenopodium quinoa HOM05D006836 ORTHO05D008691 7.4e-54 214.9 169 62.1
Haze_12612 Corylus avellana HOM05D006836 ORTHO05D008691 1.6e-53 213.8 263 48.3
Lj8A137G50 Lonicera japonica HOM05D006836 ORTHO05D008691 2.8e-53 213.0 151 66.2
Lsat_1_v5_gn_7_97361 Lactuca sativa HOM05D006836 ORTHO05D008691 4.5e-51 205.7 278 40.3
HanXRQChr11g0329431 Helianthus annuus HOM05D006836 ORTHO05D008691 2.1e-48 196.8 276 41.3
Mapoly0098s0007 Marchantia polymorpha HOM05D006836 ORTHO05D008691 7.9e-48 194.9 175 52.0
Pp3c23_16310 Physcomitrium patens HOM05D006836 ORTHO05D008691 5.1e-47 192.2 182 48.4
SMO270G0068 Selaginella moellendorffii HOM05D006836 ORTHO05D008691 1.4e-44 184.1 175 46.9
AagrBONN_evm.TU.Sc2ySwM_117.1494 Anthoceros agrestis HOM05D006836 ORTHO05D008691 1.8e-44 183.7 175 50.3
ECA236G0162 Erigeron canadensis HOM05D006836 ORTHO05D008691 2.0e-43 180.3 159 53.5
CDE10G1136 Ceratophyllum demersum HOM05D006836 ORTHO05D008691 1.1e-41 174.5 133 61.7
HPP92_003030 Vanilla planifolia HOM05D006836 ORTHO05D008691 3.0e-31 139.8 96 63.5
MD17G1118400 Malus domestica HOM05D006836 ORTHO05D008691 3.9e-31 139.4 188 41.5
MD07G1016400 Malus domestica HOM05D006836 ORTHO05D008691 1.5e-30 137.5 184 41.8
SEGI_21977 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 1.9e-30 137.1 105 59.0
Cre05.g234750 Chlamydomonas reinhardtii HOM05D006836 ORTHO05D008691 2.2e-29 133.7 195 40.0
CBR_g3513 Chara braunii HOM05D006836 ORTHO05D000407 5.9e-27 125.6 178 38.8
arahy.Tifrunner.gnm1.ann1.FY93PX Arachis hypogaea HOM05D006836 ORTHO05D000230 3.1e-12 76.6 45 73.3
PRCOL_00003549 Prasinoderma coloniale HOM05D006836 ORTHO05D008691 4.5e-11 72.8 124 39.5
Hma1.2p1_0599F.1_g187040 Hydrangea macrophylla HOM05D006836 ORTHO05D008691 5.7e-06 55.8 132 36.4
Mapoly0098s0053 Marchantia polymorpha HOM05D001007 ORTHO05D008005 5.7e-06 55.8 67 35.8


User provided reference genes

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