Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G03955 Arabidopsis thaliana HOM05D010588 ORTHO05D012793 5.7e-39 163.7 78 100.0
Carub.0005s0310 Capsella rubella HOM05D010588 ORTHO05D012793 3.0e-24 114.8 75 69.3
AT2G03933 Arabidopsis thaliana HOM05D010588 ORTHO05D012793 6.3e-22 107.1 74 64.9
AT2G03931 Arabidopsis thaliana HOM05D010588 ORTHO05D012793 1.8e-21 105.5 74 63.5
AT2G03936 Arabidopsis thaliana HOM05D010588 ORTHO05D012793 9.1e-21 103.2 81 60.5
Carub.0005s0306 Capsella rubella HOM05D010588 ORTHO05D012793 5.9e-20 100.5 78 67.9
Carub.0005s0308 Capsella rubella HOM05D010588 ORTHO05D012793 3.8e-19 97.8 75 62.7
AT2G03913 Arabidopsis thaliana HOM05D010588 ORTHO05D012793 1.9e-18 95.5 67 64.2
AT2G03937 Arabidopsis thaliana HOM05D010588 ORTHO05D012793 2.5e-18 95.1 60 66.7
Carub.0005s0307 Capsella rubella HOM05D010588 ORTHO05D012793 2.5e-18 95.1 74 58.1
CARHR146290 Cardamine hirsuta HOM05D010588 ORTHO05D012793 4.2e-18 94.4 73 61.6
C04p69960 Brassica napus HOM05D010588 ORTHO05D012793 2.0e-15 85.5 75 52.0
Carub.0005s0309 Capsella rubella HOM05D010588 ORTHO05D012793 5.7e-15 84.0 74 56.8
AL5G13720 Arabidopsis lyrata HOM05D010588 ORTHO05D012793 3.9e-11 71.2 44 59.1
AT2G03932 Arabidopsis thaliana HOM05D010588 ORTHO05D012793 5.6e-10 67.4 38 68.4
C04p69970 Brassica napus HOM05D010588 ORTHO05D012793 3.6e-09 64.7 93 40.9
A04p32450 Brassica napus HOM05D010588 ORTHO05D012793 1.0e-08 63.2 93 39.8
BraA04t18697Z Brassica rapa HOM05D010588 ORTHO05D012793 1.0e-08 63.2 93 39.8
BolC4t28497H Brassica oleracea HOM05D010588 ORTHO05D012793 2.3e-08 62.0 93 39.8
Thhalv10015888m.g Eutrema salsugineum HOM05D013096 ORTHO05D015374 4.0e-08 61.2 81 42.0
A01p29300 Brassica napus HOM05D015008 ORTHO05D017394 7.5e-07 57.0 75 40.0
CARHR030920 Cardamine hirsuta HOM05D012162 ORTHO05D013734 9.8e-07 56.6 85 45.9
A04p30270 Brassica napus HOM05D011388 ORTHO05D013734 2.9e-06 55.1 80 37.5
BraA04t18480Z Brassica rapa HOM05D011388 ORTHO05D013734 2.9e-06 55.1 80 37.5
AL8G29510 Arabidopsis lyrata HOM05D011354 ORTHO05D013735 3.7e-06 54.7 85 38.8
BcaC02g07201 Brassica carinata HOM05D021834 ORTHO05D024450 3.7e-06 54.7 76 40.8
C04p70130 Brassica napus HOM05D021834 ORTHO05D024450 3.7e-06 54.7 76 40.8
BolC4t28516H Brassica oleracea HOM05D021834 ORTHO05D024450 3.7e-06 54.7 76 40.8
Carub.0006s1016 Capsella rubella HOM05D012162 ORTHO05D014888 4.9e-06 54.3 78 43.6
C04p67570 Brassica napus HOM05D011388 ORTHO05D013734 8.3e-06 53.5 80 36.2
Carub.0006s1015 Capsella rubella HOM05D012162 ORTHO05D014888 8.3e-06 53.5 78 43.6


User provided reference genes

Program Settings