Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G03430 Arabidopsis thaliana HOM05D006591 ORTHO05D007861 8.2e-36 154.8 241 100.0
CARHR145770 Cardamine hirsuta HOM05D006591 ORTHO05D007861 7.9e-31 138.3 246 94.3
AL5G13180 Arabidopsis lyrata HOM05D006591 ORTHO05D007861 1.3e-28 131.0 102 91.2
Carub.0005s0239 Capsella rubella HOM05D006591 ORTHO05D007861 1.7e-25 120.6 102 84.3
BcaC04g21487 Brassica carinata HOM05D006591 ORTHO05D007861 2.9e-25 119.8 114 60.5
C09p31230 Brassica napus HOM05D006591 ORTHO05D007861 2.9e-25 119.8 114 60.5
BolC9t55979H Brassica oleracea HOM05D006591 ORTHO05D007861 2.9e-25 119.8 114 60.5
Sp2g14340 Schrenkiella parvula HOM05D006591 ORTHO05D007861 2.9e-25 119.8 114 78.9
BraA09t38037Z Brassica rapa HOM05D006591 ORTHO05D007861 3.8e-25 119.4 114 75.4
BcaB07g30669 Brassica carinata HOM05D006591 ORTHO05D007861 1.1e-24 117.9 115 76.5
A09p24440 Brassica napus HOM05D006591 ORTHO05D007861 2.5e-24 116.7 102 80.4
Thhalv10004832m.g Eutrema salsugineum HOM05D006591 ORTHO05D007861 1.4e-22 110.9 115 57.4
THA.LOC104801815 Tarenaya hassleriana HOM05D006591 ORTHO05D007861 4.1e-19 99.4 109 67.0
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 2.9e-17 93.2 100 66.0
Cfa008903 Carpinus fangiana HOM05D006591 ORTHO05D007861 6.5e-17 92.0 112 63.4
Solyc05g012590.4 Solanum lycopersicum HOM05D006591 ORTHO05D007861 8.5e-17 91.7 103 48.5
Sopen05g007420 Solanum pennellii HOM05D006591 ORTHO05D007861 2.5e-16 90.1 103 61.2
Phvul.002G068900 Phaseolus vulgaris HOM05D006591 ORTHO05D007861 1.2e-15 87.8 112 44.6
QL03p070967 Quercus lobata HOM05D006591 ORTHO05D007861 2.1e-15 87.0 99 47.5
CAN.G1340.9 Capsicum annuum HOM05D006591 ORTHO05D007861 2.7e-15 86.7 100 60.0
TWI75G0359 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 2.7e-15 86.7 100 65.0
Hund25197 Selenicereus undatus HOM05D006591 ORTHO05D007861 3.6e-15 86.3 108 44.4
Medtr5g043640 Medicago truncatula HOM05D006591 ORTHO05D007861 6.1e-15 85.5 78 59.0
Manes.05G107800 Manihot esculenta HOM05D006591 ORTHO05D007861 8.0e-15 85.1 100 64.0
Psat2g128080 Pisum sativum HOM05D006591 ORTHO05D007861 8.0e-15 85.1 112 58.0
PGSC0003DMG400028326 Solanum tuberosum HOM05D006591 ORTHO05D007861 1.4e-14 84.3 64 64.1
Potri.010G161300 Populus trichocarpa HOM05D006591 ORTHO05D007861 2.3e-14 83.6 74 54.1
TWI79G1606 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 2.3e-14 83.6 101 59.4
CiPaw.06G090100 Carya illinoinensis HOM05D006591 ORTHO05D007861 3.0e-14 83.2 66 62.1
DCAR_027452 Daucus carota HOM05D006591 ORTHO05D007861 4.0e-14 82.8 109 56.0
CANSAT64G0984 Cannabis sativa HOM05D006591 ORTHO05D007861 5.2e-14 82.4 79 55.7
Ca_04911_v3 Cicer arietinum L. HOM05D006591 ORTHO05D007861 5.2e-14 82.4 72 59.7
Sabra10G0122800 Salix brachista HOM05D006591 ORTHO05D007861 5.2e-14 82.4 75 56.0
VMungo1215G0675 Vigna mungo HOM05D006591 ORTHO05D007861 6.7e-14 82.0 76 56.6
Dinv16706 Davidia involucrata HOM05D006591 ORTHO05D007861 8.8e-14 81.6 60 66.7
Eucgr.G02461 Eucalyptus grandis HOM05D006591 ORTHO05D007861 8.8e-14 81.6 67 61.2
TAR374G1558 Trochodendron aralioides HOM05D006591 ORTHO05D007861 8.8e-14 81.6 102 61.8
GSVIVG01012181001 Vitis vinifera HOM05D006591 ORTHO05D007861 8.8e-14 81.6 110 54.5
Aqoxy3G00449 Aquilegia oxysepala HOM05D006591 ORTHO05D007861 1.2e-13 81.3 109 63.3
Cc11_g12350 Coffea canephora HOM05D006591 ORTHO05D007861 1.2e-13 81.3 100 45.0
MELO3C002930.2 Cucumis melo HOM05D006591 ORTHO05D007861 1.2e-13 81.3 112 42.0
Lalb_Chr10g0098581 Lupinus albus HOM05D006591 ORTHO05D007861 1.2e-13 81.3 82 53.7
Lj3C1032T3 Lonicera japonica HOM05D006591 ORTHO05D007861 1.5e-13 80.9 63 65.1
TPR.G24426 Trifolium pratense HOM05D006591 ORTHO05D007861 1.5e-13 80.9 68 60.3
COL.COLO4_05797 Corchorus olitorius HOM05D006591 ORTHO05D007861 2.0e-13 80.5 66 59.1
Glyma.02G113900 Glycine max HOM05D006591 ORTHO05D007861 2.6e-13 80.1 113 47.8
Lj2g0025600 Lotus japonicus HOM05D006591 ORTHO05D007861 2.6e-13 80.1 81 54.3
Nn4g23331 Nelumbo nucifera HOM05D006591 ORTHO05D007861 2.6e-13 80.1 100 60.0
Thecc.02G335700 Theobroma cacao HOM05D006591 ORTHO05D007861 2.6e-13 80.1 60 65.0
Ciclev10032613m.g Citrus clementina HOM05D006591 ORTHO05D007861 3.3e-13 79.7 70 57.1
TPR.G2283 Trifolium pratense HOM05D006591 ORTHO05D007861 3.3e-13 79.7 102 44.1
Atru.chr11.1685 Acer truncatum HOM05D006591 ORTHO05D007861 4.4e-13 79.3 65 60.0
EL10Ac6g14958 Beta vulgaris HOM05D006591 ORTHO05D007861 4.4e-13 79.3 109 57.8
Glyma.01G055500 Glycine max HOM05D006591 ORTHO05D007861 5.7e-13 79.0 74 59.5
Peaxi162Scf00314g00027 Petunia axillaris HOM05D006591 ORTHO05D007861 5.7e-13 79.0 98 54.1
BcaC02g07876 Brassica carinata HOM05D006591 ORTHO05D007861 7.5e-13 78.6 112 48.2
Cpa.g.sc1.95 Carica papaya HOM05D006591 ORTHO05D007861 7.5e-13 78.6 99 42.4
Gohir.D05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 7.5e-13 78.6 76 55.3
CsaV3_5G025480 Cucumis sativus L. HOM05D006591 ORTHO05D007861 9.7e-13 78.2 78 51.3
RcHm_v2.0_Chr4g0438821 Rosa chinensis HOM05D006591 ORTHO05D007861 9.7e-13 78.2 66 59.1
C06p01310 Brassica napus HOM05D006591 ORTHO05D007861 1.3e-12 77.8 80 60.0
Duzib268G0337 Durio zibethinus HOM05D006591 ORTHO05D007861 1.7e-12 77.4 64 62.5
PSO017G3262 Papaver somniferum HOM05D006591 ORTHO05D007861 2.2e-12 77.0 76 53.9
Gorai.009G326200 Gossypium raimondii HOM05D006591 ORTHO05D007861 2.8e-12 76.6 66 56.1
Rhsim12G0134100 Rhododendron simsii HOM05D006591 ORTHO05D007861 2.8e-12 76.6 70 61.4
Haze_11932 Corylus avellana HOM05D006591 ORTHO05D007861 3.7e-12 76.3 138 37.0
Gohir.A05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 3.7e-12 76.3 76 52.6
PGR119G1238 Punica granatum HOM05D006591 ORTHO05D007861 3.7e-12 76.3 109 39.4
vmacro16368 Vaccinium macrocarpon HOM05D006591 ORTHO05D007861 3.7e-12 76.3 109 41.3
arahy.Tifrunner.gnm1.ann1.09DLU7 Arachis hypogaea HOM05D006591 ORTHO05D007861 4.8e-12 75.9 75 54.7
SGA_v2.0_scaffold287G47153 Striga asiatica HOM05D006591 ORTHO05D007861 6.3e-12 75.5 69 56.5
Oeu028261.1 Olea europaea HOM05D006591 ORTHO05D007861 8.2e-12 75.1 70 51.4
Actinidia19919 Actinidia chinensis HOM05D006591 ORTHO05D007861 1.1e-11 74.7 57 63.2
MSTRG.2323 Avicennia marina HOM05D006591 ORTHO05D007861 1.1e-11 74.7 109 56.9
MD13G1065800 Malus domestica HOM05D006591 ORTHO05D007861 1.1e-11 74.7 67 53.7
CSS0024373 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.8e-11 73.9 67 55.2
Migut.E00061 Erythranthe guttata HOM05D006591 ORTHO05D007861 1.8e-11 73.9 69 53.6
FAN17G0139 Fragaria x ananassa HOM05D006591 ORTHO05D007861 3.1e-11 73.2 100 62.0
Prupe.1G282400 Prunus persica HOM05D006591 ORTHO05D007861 3.1e-11 73.2 67 52.2
MD16G1064400 Malus domestica HOM05D006591 ORTHO05D007861 4.1e-11 72.8 71 52.1
Sc11g0002290 Simmondsia chinensis HOM05D006591 ORTHO05D007861 5.3e-11 72.4 69 53.6
FAN12G1471 Fragaria x ananassa HOM05D006591 ORTHO05D007861 7.0e-11 72.0 109 58.7
unitig_22.g5555 Utricularia gibba HOM05D006591 ORTHO05D007861 7.0e-11 72.0 69 50.7
arahy.Tifrunner.gnm1.ann1.74ATFD Arachis hypogaea HOM05D006591 ORTHO05D007861 9.1e-11 71.6 109 40.4
CSS0002938 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.2e-10 71.2 67 53.7
CSS0020090 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.2e-10 71.2 67 53.7
HanXRQChr17g0545461 Helianthus annuus HOM05D006591 ORTHO05D007861 1.2e-10 71.2 106 49.1
FvH4_4g30470 Fragaria vesca HOM05D006591 ORTHO05D007861 1.6e-10 70.9 100 61.0
FAN07G2187 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.6e-10 70.9 66 54.5
Mapoly0001s0139 Marchantia polymorpha HOM05D006591 ORTHO05D007861 1.6e-10 70.9 63 57.1
Actinidia31944 Actinidia chinensis HOM05D006591 ORTHO05D007861 2.7e-10 70.1 57 61.4
CDE07G0054 Ceratophyllum demersum HOM05D006591 ORTHO05D007861 2.7e-10 70.1 63 50.8
CSS0029304 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 3.5e-10 69.7 67 52.2
CSS0032544 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 3.5e-10 69.7 67 52.2
Ah.02g126600 Amaranthus hybridus HOM05D006591 ORTHO05D007861 5.9e-10 68.9 61 59.0
ECA246G1963 Erigeron canadensis HOM05D006591 ORTHO05D007861 7.7e-10 68.6 62 54.8
FAN22G1196 Fragaria x ananassa HOM05D006591 ORTHO05D007861 7.7e-10 68.6 66 53.0
Lsat_1_v5_gn_3_56260 Lactuca sativa HOM05D006591 ORTHO05D007861 1.3e-09 67.8 108 55.6
PSO478G2874 Papaver somniferum HOM05D006591 ORTHO05D007861 3.8e-09 66.2 74 51.4
C04p62430 Brassica napus HOM05D006591 ORTHO05D007861 1.5e-08 64.3 52 69.2
BolC4t27718H Brassica oleracea HOM05D006591 ORTHO05D007861 1.5e-08 64.3 52 69.2
HPP92_018457 Vanilla planifolia HOM05D006591 ORTHO05D007861 1.5e-08 64.3 64 48.4
Sed0000747 Sechium edule HOM05D006591 ORTHO05D007861 2.5e-08 63.5 48 64.6
AagrBONN_evm.TU.Sc2ySwM_344.1136 Anthoceros agrestis HOM05D006591 ORTHO05D007861 7.2e-08 62.0 71 46.5
ATR0111G005 Amborella trichopoda HOM05D006591 ORTHO05D007861 6.1e-07 58.9 79 40.5
SEGI_35394 Sequoiadendron giganteum HOM05D006591 ORTHO05D007861 8.0e-07 58.5 60 53.3
Zm00001eb214530 Zea mays HOM05D006591 ORTHO05D007861 1.4e-06 57.8 99 62.6
CSS0029980 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.8e-06 57.4 68 50.0
CBR_g23768 Chara braunii HOM05D006591 ORTHO05D007861 5.2e-06 55.8 65 44.6
EL10Ac6g14964 Beta vulgaris HOM05D027931 ORTHO05D007861 6.8e-06 55.5 70 44.3


User provided reference genes

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