Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G03420 Arabidopsis thaliana HOM05D006961 ORTHO05D008809 7.5e-92 340.5 171 100.0
Carub.0005s0238 Capsella rubella HOM05D006961 ORTHO05D008809 1.2e-84 316.6 173 92.5
Thhalv10005024m.g Eutrema salsugineum HOM05D006961 ORTHO05D008809 2.0e-81 305.8 171 87.7
BcaC04g21488 Brassica carinata HOM05D006961 ORTHO05D008809 1.7e-80 302.8 171 88.3
C09p31220 Brassica napus HOM05D006961 ORTHO05D008809 1.7e-80 302.8 171 88.3
BolC9t55978H Brassica oleracea HOM05D006961 ORTHO05D008809 1.7e-80 302.8 171 88.3
BraA09t38036Z Brassica rapa HOM05D006961 ORTHO05D008809 8.6e-80 300.4 171 87.7
A02p33440 Brassica napus HOM05D006961 ORTHO05D008809 1.5e-79 299.7 176 84.7
BcaB07g30670 Brassica carinata HOM05D006961 ORTHO05D008809 2.5e-79 298.9 171 86.5
Sp2g14330 Schrenkiella parvula HOM05D006961 ORTHO05D008809 7.2e-79 297.4 175 85.7
CARHR145760 Cardamine hirsuta HOM05D006961 ORTHO05D008809 4.7e-78 294.7 175 87.4
A09p24430 Brassica napus HOM05D006961 ORTHO05D008809 3.0e-77 292.0 171 86.5
AL5G13170 Arabidopsis lyrata HOM05D006961 ORTHO05D008809 2.3e-72 275.8 144 94.4
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 7.0e-66 254.2 155 81.3
BcaC03g17213 Brassica carinata HOM05D006961 ORTHO05D008809 7.3e-63 244.2 144 84.0
C02p51430 Brassica napus HOM05D006961 ORTHO05D008809 7.3e-63 244.2 144 84.0
BolC2t11231H Brassica oleracea HOM05D006961 ORTHO05D008809 7.3e-63 244.2 144 84.0
THA.LOC104824066 Tarenaya hassleriana HOM05D006961 ORTHO05D008809 3.2e-58 228.8 174 69.0
COL.COLO4_27931 Corchorus olitorius HOM05D006961 ORTHO05D008809 6.6e-48 194.5 176 59.7
MSTRG.7764 Avicennia marina HOM05D006961 ORTHO05D008809 2.5e-47 192.6 139 68.3
ECA234G0986 Erigeron canadensis HOM05D006961 ORTHO05D008809 2.5e-47 192.6 165 62.4
CANSAT64G0471 Cannabis sativa HOM05D006961 ORTHO05D008809 4.3e-47 191.8 144 69.4
Gohir.D05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 4.7e-46 188.3 145 66.9
Atru.chr11.1688 Acer truncatum HOM05D006961 ORTHO05D008809 6.2e-46 188.0 173 56.6
HanXRQChr12g0379241 Helianthus annuus HOM05D006961 ORTHO05D008809 6.2e-46 188.0 127 73.2
Ciclev10032810m.g Citrus clementina HOM05D006961 ORTHO05D008809 3.1e-45 185.7 139 67.6
Gohir.A05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 4.0e-45 185.3 130 70.0
Eucgr.G02462 Eucalyptus grandis HOM05D006961 ORTHO05D008809 6.8e-45 184.5 141 69.5
Actinidia19920 Actinidia chinensis HOM05D006961 ORTHO05D008809 1.2e-44 183.7 129 70.5
Sed0005182 Sechium edule HOM05D006961 ORTHO05D008809 1.2e-44 183.7 147 64.6
Prupe.1G282200 Prunus persica HOM05D006961 ORTHO05D008809 2.0e-44 183.0 168 56.5
DCAR_027451 Daucus carota HOM05D006961 ORTHO05D008809 2.6e-44 182.6 132 72.0
Psat2g128160 Pisum sativum HOM05D006961 ORTHO05D008809 2.6e-44 182.6 136 67.6
TWI75G1056 Tripterygium wilfordii HOM05D006961 ORTHO05D008809 2.6e-44 182.6 160 60.0
Lsat_1_v5_gn_4_10260 Lactuca sativa HOM05D006961 ORTHO05D008809 3.4e-44 182.2 127 70.1
Nitab4.5_0000334g0230 Nicotiana tabacum HOM05D006961 ORTHO05D008809 3.4e-44 182.2 142 66.2
PGR119G1669 Punica granatum HOM05D006961 ORTHO05D008809 3.4e-44 182.2 149 65.1
Peaxi162Scf00314g00025 Petunia axillaris HOM05D006961 ORTHO05D008809 5.8e-44 181.4 141 66.7
Ca_04910_v3 Cicer arietinum L. HOM05D006961 ORTHO05D008809 7.6e-44 181.0 140 64.3
Duzib268G0330 Durio zibethinus HOM05D006961 ORTHO05D008809 7.6e-44 181.0 130 68.5
FvH4_4g30480 Fragaria vesca HOM05D006961 ORTHO05D008809 1.3e-43 180.3 125 71.2
Hma1.2p1_0357F.1_g134450 Hydrangea macrophylla HOM05D006961 ORTHO05D008809 1.3e-43 180.3 129 68.2
vmacro01328 Vaccinium macrocarpon HOM05D006961 ORTHO05D008809 1.3e-43 180.3 144 66.0
FAN07G0372 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.7e-43 179.9 125 70.4
FAN17G2308 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.7e-43 179.9 125 70.4
SalBow2G3426 Salvia bowleyana HOM05D006961 ORTHO05D008809 2.2e-43 179.5 130 68.5
Sopen05g007430 Solanum pennellii HOM05D006961 ORTHO05D008809 2.2e-43 179.5 171 58.5
Dinv34116 Davidia involucrata HOM05D006961 ORTHO05D008809 3.8e-43 178.7 165 58.8
TPR.G24476 Trifolium pratense HOM05D006961 ORTHO05D008809 6.4e-43 177.9 143 63.6
TAR622G0866 Trochodendron aralioides HOM05D006961 ORTHO05D008809 6.4e-43 177.9 141 64.5
FAN22G0366 Fragaria x ananassa HOM05D006961 ORTHO05D008809 8.4e-43 177.6 125 69.6
Thecc.02G336300 Theobroma cacao HOM05D006961 ORTHO05D008809 8.4e-43 177.6 140 65.0
CsaV3_5G025620 Cucumis sativus L. HOM05D006961 ORTHO05D008809 1.1e-42 177.2 150 58.7
PGSC0003DMG400028327 Solanum tuberosum HOM05D006961 ORTHO05D008809 1.1e-42 177.2 162 60.5
MELO3C002920.2 Cucumis melo HOM05D006961 ORTHO05D008809 1.9e-42 176.4 140 64.3
Medtr5g043580 Medicago truncatula HOM05D006961 ORTHO05D008809 1.9e-42 176.4 137 64.2
Solyc05g012600.3 Solanum lycopersicum HOM05D006961 ORTHO05D008809 1.9e-42 176.4 172 57.0
Haze_11979 Corylus avellana HOM05D006961 ORTHO05D004702 2.4e-42 176.0 172 55.8
Lalb_Chr17g0341001 Lupinus albus HOM05D006961 ORTHO05D008809 3.2e-42 175.6 147 62.6
MD13G1065900 Malus domestica HOM05D006961 ORTHO05D008809 3.2e-42 175.6 164 56.7
SGA_v2.0_scaffold16G07754 Striga asiatica HOM05D006961 ORTHO05D008809 3.2e-42 175.6 126 68.3
RcHm_v2.0_Chr4g0438851 Rosa chinensis HOM05D006961 ORTHO05D008809 5.4e-42 174.9 125 69.6
CAN.G1340.11 Capsicum annuum HOM05D006961 ORTHO05D008809 9.3e-42 174.1 141 63.8
CiPaw.06G090400 Carya illinoinensis HOM05D006961 ORTHO05D008809 9.3e-42 174.1 144 66.0
PSO478G0730 Papaver somniferum HOM05D006961 ORTHO05D008809 9.3e-42 174.1 138 63.8
QL03p070935 Quercus lobata HOM05D006961 ORTHO05D008809 9.3e-42 174.1 139 66.2
arahy.Tifrunner.gnm1.ann1.T2VQ83 Arachis hypogaea HOM05D006961 ORTHO05D008809 1.2e-41 173.7 164 58.5
arahy.Tifrunner.gnm1.ann1.TP0XC6 Arachis hypogaea HOM05D006961 ORTHO05D008809 1.2e-41 173.7 164 58.5
ClCG09G020750 Citrullus lanatus HOM05D006961 ORTHO05D008809 1.2e-41 173.7 139 64.0
Glyma.01G055400 Glycine max HOM05D006961 ORTHO05D008809 1.2e-41 173.7 176 55.7
Ah.03g139190 Amaranthus hybridus HOM05D006961 ORTHO05D008809 1.6e-41 173.3 156 60.9
VMungo1215G1627 Vigna mungo HOM05D006961 ORTHO05D008809 1.6e-41 173.3 182 56.0
Cfa008905 Carpinus fangiana HOM05D006961 ORTHO05D008809 3.5e-41 172.2 124 67.7
MD16G1064700 Malus domestica HOM05D006961 ORTHO05D008809 3.5e-41 172.2 126 69.0
PSO017G3353 Papaver somniferum HOM05D006961 ORTHO05D008809 4.6e-41 171.8 138 63.0
CSS0004568 Camellia sinensis var. sinensis HOM05D006961 ORTHO05D008809 6.0e-41 171.4 136 65.4
Cpa.g.sc1.93 Carica papaya HOM05D006961 ORTHO05D008809 1.0e-40 170.6 176 54.5
Potri.010G161400 Populus trichocarpa HOM05D006961 ORTHO05D008809 1.3e-40 170.2 162 56.2
Hund05862 Selenicereus undatus HOM05D006961 ORTHO05D008809 1.3e-40 170.2 140 65.7
Glyma.02G113800 Glycine max HOM05D006961 ORTHO05D008809 2.3e-40 169.5 148 60.8
AUR62003136 Chenopodium quinoa HOM05D006961 ORTHO05D008809 3.0e-40 169.1 127 68.5
Nn3g17372 Nelumbo nucifera HOM05D006961 ORTHO05D008809 3.0e-40 169.1 175 54.9
unitig_22.g6499 Utricularia gibba HOM05D006961 ORTHO05D008809 3.0e-40 169.1 177 50.8
Manes.05G107700 Manihot esculenta HOM05D006961 ORTHO05D008809 3.9e-40 168.7 149 60.4
Rhsim12G0076500 Rhododendron simsii HOM05D006961 ORTHO05D008809 5.1e-40 168.3 141 61.7
AUR62007955 Chenopodium quinoa HOM05D006961 ORTHO05D008809 1.1e-39 167.2 134 65.7
Lj2g0005939 Lotus japonicus HOM05D006961 ORTHO05D008809 1.9e-39 166.4 173 52.6
CDE07G0364 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 3.3e-39 165.6 117 67.5
Migut.L01221 Erythranthe guttata HOM05D006961 ORTHO05D008809 7.3e-39 164.5 142 58.5
Oeu015341.2 Olea europaea HOM05D006961 ORTHO05D008809 7.3e-39 164.5 109 72.5
Lj3A1032T68 Lonicera japonica HOM05D006961 ORTHO05D008809 9.6e-39 164.1 121 66.9
EL10Ac6g14957 Beta vulgaris HOM05D006961 ORTHO05D008809 1.3e-38 163.7 166 53.0
GSVIVG01012179001 Vitis vinifera HOM05D006961 ORTHO05D008809 1.3e-38 163.7 159 56.0
Aqoxy3G00448 Aquilegia oxysepala HOM05D006961 ORTHO05D008809 2.1e-38 162.9 122 63.9
Cc11_g12360 Coffea canephora HOM05D006961 ORTHO05D008809 6.2e-38 161.4 120 65.0
MBI16_g15564_MAGBIO Magnolia biondii HOM05D006961 ORTHO05D008809 5.3e-37 158.3 143 57.3
ATR0111G017 Amborella trichopoda HOM05D006961 ORTHO05D008809 2.6e-36 156.0 118 61.0
Zm00001eb400470 Zea mays HOM05D006961 ORTHO05D008809 3.4e-36 155.6 140 58.6
CDE04G0363 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 4.4e-36 155.2 116 65.5
HPP92_023640 Vanilla planifolia HOM05D006961 ORTHO05D008809 1.3e-35 153.7 117 63.2
Sc04g0007750 Simmondsia chinensis HOM05D006961 ORTHO05D008809 1.9e-34 149.8 99 69.7
SEGI_13566 Sequoiadendron giganteum HOM05D006961 ORTHO05D008809 7.8e-33 144.4 117 59.0
HPP92_023624 Vanilla planifolia HOM05D006961 ORTHO05D008809 7.1e-26 121.3 95 62.1
Gorai.009G326100 Gossypium raimondii HOM05D006961 ORTHO05D008809 2.7e-25 119.4 105 63.8
Mapoly0047s0086 Marchantia polymorpha HOM05D006961 ORTHO05D008809 6.7e-24 114.8 167 42.5
Zm00001eb176890 Zea mays HOM05D006961 ORTHO05D008809 6.7e-24 114.8 84 63.1
Actinidia31945 Actinidia chinensis HOM05D006961 ORTHO05D008809 7.4e-23 111.3 83 71.1
Pp3c5_22460 Physcomitrium patens HOM05D006961 ORTHO05D008809 6.2e-22 108.2 118 48.3
AagrBONN_evm.TU.Sc2ySwM_228.3757 Anthoceros agrestis HOM05D006961 ORTHO05D008809 3.1e-21 105.9 119 47.9
SalBow2G3119 Salvia bowleyana HOM05D006961 ORTHO05D008809 4.2e-18 95.5 70 67.1
SMO356G0726 Selaginella moellendorffii HOM05D006961 ORTHO05D008809 1.2e-17 94.0 121 44.6
CBR_g50745 Chara braunii HOM05D006961 ORTHO05D008809 1.1e-15 87.4 115 39.1
FAN12G0580 Fragaria x ananassa HOM05D006961 ORTHO05D008809 2.4e-13 79.7 50 70.0
Cre02.g114450 Chlamydomonas reinhardtii HOM05D006961 ORTHO05D008809 7.9e-09 64.7 134 40.3


User provided reference genes

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