Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G02410 Arabidopsis thaliana HOM05D006925 ORTHO05D008830 3.0e-148 528.5 267 100.0
AL5G11640 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 8.9e-108 394.0 244 83.6
Sp2g13680 Schrenkiella parvula HOM05D006925 ORTHO05D008830 3.2e-97 359.0 244 79.1
BraA06t27246Z Brassica rapa HOM05D006925 ORTHO05D008830 1.4e-92 343.6 248 76.2
CARHR144990 Cardamine hirsuta HOM05D006925 ORTHO05D008830 2.3e-92 342.8 258 73.3
Thhalv10004663m.g Eutrema salsugineum HOM05D006925 ORTHO05D008830 6.8e-92 341.3 244 75.0
A06p43640 Brassica napus HOM05D006925 ORTHO05D008830 3.4e-91 339.0 249 75.9
BcaC06g31233 Brassica carinata HOM05D006925 ORTHO05D008830 4.4e-91 338.6 245 76.3
BcaC06g34054 Brassica carinata HOM05D006925 ORTHO05D008830 7.6e-91 337.8 248 75.8
C07p33220 Brassica napus HOM05D006925 ORTHO05D008830 7.6e-91 337.8 248 75.8
BolC7t43833H Brassica oleracea HOM05D006925 ORTHO05D008830 7.6e-91 337.8 248 75.8
Aa31LG2G7670 Aethionema arabicum HOM05D006925 ORTHO05D008830 2.8e-77 292.7 244 68.4
Haze_09956 Corylus avellana HOM05D006925 ORTHO05D008830 3.2e-73 279.3 233 62.7
THA.LOC104824095 Tarenaya hassleriana HOM05D006925 ORTHO05D008830 3.9e-71 272.3 191 72.3
Cfa004416 Carpinus fangiana HOM05D006925 ORTHO05D008830 1.5e-70 270.4 205 67.8
Dinv30983 Davidia involucrata HOM05D006925 ORTHO05D008830 1.4e-68 263.8 208 64.9
CiPaw.05G000400 Carya illinoinensis HOM05D006925 ORTHO05D008830 1.8e-68 263.5 203 65.0
Thecc.06G062200 Theobroma cacao HOM05D006925 ORTHO05D008830 1.8e-68 263.5 219 63.0
TWI14G0460 Tripterygium wilfordii HOM05D006925 ORTHO05D008830 5.3e-68 261.9 220 60.9
Gohir.A10G068400 Gossypium hirsutum HOM05D006925 ORTHO05D008830 9.0e-68 261.2 220 62.7
Gohir.D10G082800 Gossypium hirsutum HOM05D006925 ORTHO05D008830 2.0e-67 260.0 220 62.7
Gorai.011G089700 Gossypium raimondii HOM05D006925 ORTHO05D008830 2.0e-67 260.0 220 62.7
Sabra03G0019700 Salix brachista HOM05D006925 ORTHO05D000812 2.6e-67 259.6 222 61.3
Migut.B00701 Erythranthe guttata HOM05D006925 ORTHO05D008830 3.4e-67 259.2 223 61.9
Manes.06G015100 Manihot esculenta HOM05D006925 ORTHO05D008830 3.4e-67 259.2 208 63.0
DCAR_004828 Daucus carota HOM05D006925 ORTHO05D008830 4.5e-67 258.8 203 66.0
GSVIVG01023121001 Vitis vinifera HOM05D006925 ORTHO05D008830 4.5e-67 258.8 207 64.3
Duzib160G0166 Durio zibethinus HOM05D006925 ORTHO05D008830 9.9e-67 257.7 218 61.5
Phvul.003G090400 Phaseolus vulgaris HOM05D006925 ORTHO05D008830 2.2e-66 256.5 208 63.0
CSS0028149 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 3.8e-66 255.8 224 60.7
TAR628G1169 Trochodendron aralioides HOM05D006925 ORTHO05D008830 3.8e-66 255.8 225 59.1
Potri.003G046600 Populus trichocarpa HOM05D006925 ORTHO05D008830 4.9e-66 255.4 221 60.6
COL.COLO4_31098 Corchorus olitorius HOM05D006925 ORTHO05D008830 6.4e-66 255.0 203 63.5
MBI06_g17054_MAGBIO Magnolia biondii HOM05D006925 ORTHO05D008830 8.4e-66 254.6 199 64.3
Hma1.2p1_0157F.1_g069250 Hydrangea macrophylla HOM05D006925 ORTHO05D008830 1.1e-65 254.2 219 63.0
CANSAT01G0563 Cannabis sativa HOM05D006925 ORTHO05D008830 1.4e-65 253.8 219 62.1
HanXRQChr03g0071141 Helianthus annuus HOM05D006925 ORTHO05D008830 1.4e-65 253.8 222 62.6
ATR1089G139 Amborella trichopoda HOM05D006925 ORTHO05D008830 1.9e-65 253.4 219 60.7
EL10Ac6g13952 Beta vulgaris HOM05D006925 ORTHO05D008830 3.2e-65 252.7 233 59.2
VMungo1215G1006 Vigna mungo HOM05D006925 ORTHO05D008830 3.2e-65 252.7 208 61.5
Ah.02g128580 Amaranthus hybridus HOM05D006925 ORTHO05D008830 4.2e-65 252.3 212 63.2
CSS0004280 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 4.2e-65 252.3 206 63.1
Sed0012673 Sechium edule HOM05D006925 ORTHO05D008830 4.2e-65 252.3 186 66.7
Peaxi162Scf00055g00018 Petunia axillaris HOM05D006925 ORTHO05D008830 5.5e-65 251.9 190 66.3
QL02p103778 Quercus lobata HOM05D006925 ORTHO05D008830 5.5e-65 251.9 218 61.0
Glyma.07G271000 Glycine max HOM05D006925 ORTHO05D008830 1.2e-64 250.8 211 61.6
PGR042G2053 Punica granatum HOM05D006925 ORTHO05D008830 1.6e-64 250.4 224 59.8
MSTRG.16455 Avicennia marina HOM05D006925 ORTHO05D008830 2.1e-64 250.0 206 61.2
Carub.0005s0146 Capsella rubella HOM05D006925 ORTHO05D008830 2.1e-64 250.0 158 81.6
ClCG10G007640 Citrullus lanatus HOM05D006925 ORTHO05D008830 2.1e-64 250.0 189 66.7
RcHm_v2.0_Chr7g0218321 Rosa chinensis HOM05D006925 ORTHO05D008830 2.7e-64 249.6 219 61.6
Actinidia00135 Actinidia chinensis HOM05D006925 ORTHO05D008830 6.0e-64 248.4 189 66.1
CAN.G402.4 Capsicum annuum HOM05D006925 ORTHO05D008830 6.0e-64 248.4 202 63.9
PGSC0003DMG400003436 Solanum tuberosum HOM05D006925 ORTHO05D008830 1.3e-63 247.3 202 63.4
unitig_8.g4519 Utricularia gibba HOM05D006925 ORTHO05D008830 1.3e-63 247.3 217 57.1
Lsat_1_v5_gn_7_69720 Lactuca sativa HOM05D006925 ORTHO05D008830 2.3e-63 246.5 202 64.9
Sopen10g013620 Solanum pennellii HOM05D006925 ORTHO05D008830 2.3e-63 246.5 202 63.9
ECA248G0237 Erigeron canadensis HOM05D002199 ORTHO05D007829 5.1e-63 245.4 192 66.7
Solyc10g044840.2 Solanum lycopersicum HOM05D006925 ORTHO05D008830 1.1e-62 244.2 202 62.9
arahy.Tifrunner.gnm1.ann1.EDE5FN Arachis hypogaea HOM05D006925 ORTHO05D008830 1.5e-62 243.8 203 64.5
MD15G1445500 Malus domestica HOM05D006925 ORTHO05D008830 1.9e-62 243.4 210 60.5
FvH4_5g27220 Fragaria vesca HOM05D006925 ORTHO05D008830 3.3e-62 242.7 183 67.2
FAN08G3037 Fragaria x ananassa HOM05D006925 ORTHO05D008830 3.3e-62 242.7 183 67.2
FAN13G1230 Fragaria x ananassa HOM05D006925 ORTHO05D008830 3.3e-62 242.7 183 67.2
FAN18G1352 Fragaria x ananassa HOM05D006925 ORTHO05D008830 3.3e-62 242.7 183 67.2
Prupe.1G587400 Prunus persica HOM05D006925 ORTHO05D008830 4.3e-62 242.3 189 64.6
Sc03g0005610 Simmondsia chinensis HOM05D006925 ORTHO05D008830 1.3e-61 240.7 205 61.0
Cc02_g23820 Coffea canephora HOM05D006925 ORTHO05D008830 1.6e-61 240.4 203 62.6
Nitab4.5_0000288g0050 Nicotiana tabacum HOM05D006925 ORTHO05D008830 1.6e-61 240.4 204 61.3
PSO210G4845 Papaver somniferum HOM05D006925 ORTHO05D008830 2.1e-61 240.0 203 63.1
Nitab4.5_0002274g0030 Nicotiana tabacum HOM05D006925 ORTHO05D008830 2.8e-61 239.6 202 61.9
arahy.Tifrunner.gnm1.ann1.MTF64G Arachis hypogaea HOM05D006925 ORTHO05D008830 3.7e-61 239.2 203 63.5
Lj4g0023352 Lotus japonicus HOM05D006925 ORTHO05D008830 4.8e-61 238.8 206 61.7
Aqoxy5G01835 Aquilegia oxysepala HOM05D006925 ORTHO05D008830 6.2e-61 238.4 224 55.4
CDE05G0936 Ceratophyllum demersum HOM05D006925 ORTHO05D008830 1.1e-60 237.7 195 61.0
CsaV3_3G006780 Cucumis sativus L. HOM05D006925 ORTHO05D008830 1.1e-60 237.7 183 63.4
AUR62040119 Chenopodium quinoa HOM05D006925 ORTHO05D008830 1.4e-60 237.3 218 60.6
Eucgr.G00053 Eucalyptus grandis HOM05D006925 ORTHO05D008830 1.8e-60 236.9 190 65.3
AUR62032491 Chenopodium quinoa HOM05D006925 ORTHO05D008830 3.1e-60 236.1 190 62.6
Hund15314 Selenicereus undatus HOM05D006925 ORTHO05D008830 1.1e-57 227.6 208 60.1
Lalb_Chr07g0176851 Lupinus albus HOM05D006925 ORTHO05D008830 4.2e-57 225.7 203 59.1
MELO3C016443.2 Cucumis melo HOM05D006925 ORTHO05D008830 5.1e-55 218.8 167 64.7
Ca_13518_v3 Cicer arietinum L. HOM05D006925 ORTHO05D008830 6.7e-55 218.4 186 59.1
HPP92_001204 Vanilla planifolia HOM05D006925 ORTHO05D008830 1.1e-54 217.6 185 60.5
Nn5g27113 Nelumbo nucifera HOM05D006925 ORTHO05D008830 2.5e-54 216.5 167 64.1
Lj5A307T31 Lonicera japonica HOM05D006925 ORTHO05D008830 7.4e-54 214.9 189 57.1
SGA_v2.0_scaffold254G45226 Striga asiatica HOM05D006925 ORTHO05D008830 5.9e-51 205.3 276 43.1
vmacro01630 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 2.9e-50 203.0 209 54.5
Sabra03G0019900 Salix brachista HOM05D006925 ORTHO05D008830 2.5e-49 199.9 157 65.0
Medtr4g134410 Medicago truncatula HOM05D006925 ORTHO05D008830 7.2e-49 198.4 189 54.0
Psat4g001760 Pisum sativum HOM05D006925 ORTHO05D008830 1.0e-47 194.5 190 52.6
Mapoly0001s0380 Marchantia polymorpha HOM05D006925 ORTHO05D008830 1.8e-47 193.7 193 56.0
Pp3c15_4340 Physcomitrium patens HOM05D006925 ORTHO05D008830 9.7e-46 188.0 223 46.2
Ciclev10003645m.g Citrus clementina HOM05D006925 ORTHO05D008830 1.6e-45 187.2 128 70.3
Pp3c9_8480 Physcomitrium patens HOM05D006925 ORTHO05D008830 1.4e-44 184.1 219 48.4
TPR.G5931 Trifolium pratense HOM05D006925 ORTHO05D008830 1.6e-40 170.6 238 43.3
AagrBONN_evm.TU.Sc2ySwM_369.585 Anthoceros agrestis HOM05D006925 ORTHO05D008830 3.6e-40 169.5 197 49.7
Zm00001eb064090 Zea mays HOM05D006925 ORTHO05D008830 4.6e-40 169.1 167 53.9
SMO358G0233 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 4.3e-38 162.5 185 48.1
SEGI_06138 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 1.9e-33 147.1 211 42.2
Rhsim11G0114700 Rhododendron simsii HOM05D006925 ORTHO05D008830 1.6e-27 127.5 222 40.1
SEGI_30664 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 2.6e-22 110.2 141 46.1
CBR_g49407 Chara braunii HOM05D000019 ORTHO05D000002 9.7e-22 108.2 142 43.7
Oeu016658.1 Olea europaea HOM05D006925 ORTHO05D008830 1.2e-19 101.3 77 66.2


User provided reference genes

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