Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G01755 Arabidopsis thaliana HOM05D007597 ORTHO05D009608 2.5e-98 362.1 180 100.0
AL5G10880 Arabidopsis lyrata HOM05D007597 ORTHO05D009608 1.2e-79 300.1 171 90.1
Thhalv10004999m.g Eutrema salsugineum HOM05D007597 ORTHO05D009608 1.0e-62 243.8 177 72.3
CARHR144330 Cardamine hirsuta HOM05D007597 ORTHO05D009608 2.5e-61 239.2 175 74.3
Sp2g13210 Schrenkiella parvula HOM05D007597 ORTHO05D009608 1.4e-59 233.4 175 74.9
BcaC06g34122 Brassica carinata HOM05D007597 ORTHO05D009608 4.8e-57 224.9 178 70.2
BolC7t43776H Brassica oleracea HOM05D007597 ORTHO05D009608 4.8e-57 224.9 178 70.2
C07p32430 Brassica napus HOM05D007597 ORTHO05D009608 2.4e-56 222.6 178 69.7
A06p44080 Brassica napus HOM05D007597 ORTHO05D009608 6.9e-56 221.1 178 69.7
BraA06t27282Z Brassica rapa HOM05D007597 ORTHO05D009608 6.9e-56 221.1 178 69.7
BcaC06g31279 Brassica carinata HOM05D007597 ORTHO05D009608 3.8e-54 215.3 178 67.4
Aa31LG2G8130 Aethionema arabicum HOM05D007597 ORTHO05D009608 1.4e-51 206.8 183 63.4
Carub.0005s0071 Capsella rubella HOM05D007597 ORTHO05D009608 7.5e-42 174.5 91 94.5
THA.LOC104824124 Tarenaya hassleriana HOM05D007597 ORTHO05D009608 3.0e-35 152.5 111 70.3
Atru.chr11.909 Acer truncatum HOM05D007597 ORTHO05D009608 2.0e-34 149.8 118 63.6
Haze_10869 Corylus avellana HOM05D007597 ORTHO05D009608 6.3e-33 144.8 115 62.6
Duzib251G0764 Durio zibethinus HOM05D007597 ORTHO05D009608 2.4e-32 142.9 124 58.9
ECA246G4875 Erigeron canadensis HOM05D007597 ORTHO05D009608 7.0e-32 141.4 145 55.2
Gohir.D04G186400 Gossypium hirsutum HOM05D007597 ORTHO05D009608 9.1e-32 141.0 119 58.0
VMungo1215G2214 Vigna mungo HOM05D007597 ORTHO05D009608 9.1e-32 141.0 139 51.1
Actinidia38436 Actinidia chinensis HOM05D007597 ORTHO05D009608 1.6e-31 140.2 146 50.7
CiPaw.06G052900 Carya illinoinensis HOM05D007597 ORTHO05D009608 2.0e-31 139.8 117 62.4
Rhsim04G0170700 Rhododendron simsii HOM05D007597 ORTHO05D009608 2.7e-31 139.4 167 47.3
Phvul.003G017900 Phaseolus vulgaris HOM05D007597 ORTHO05D009608 3.5e-31 139.0 151 48.3
AUR62037405 Chenopodium quinoa HOM05D007597 ORTHO05D009608 5.9e-31 138.3 115 59.1
TPR.G36945 Trifolium pratense HOM05D007597 ORTHO05D009608 5.9e-31 138.3 117 58.1
Peaxi162Scf00937g00322 Petunia axillaris HOM05D007597 ORTHO05D009608 7.7e-31 137.9 117 59.8
Gorai.012G182800 Gossypium raimondii HOM05D007597 ORTHO05D009608 1.0e-30 137.5 123 56.9
Lj2g0017292 Lotus japonicus HOM05D007597 ORTHO05D009608 1.0e-30 137.5 117 56.4
Nn3g20775 Nelumbo nucifera HOM05D007597 ORTHO05D009608 1.0e-30 137.5 145 48.3
QL93p0203_0030 Quercus lobata HOM05D007597 ORTHO05D009608 1.3e-30 137.1 147 51.7
arahy.Tifrunner.gnm1.ann1.FU0M5P Arachis hypogaea HOM05D007597 ORTHO05D009608 1.7e-30 136.7 116 56.9
Dinv07717 Davidia involucrata HOM05D007597 ORTHO05D009608 1.7e-30 136.7 111 63.1
Cc11_g07700 Coffea canephora HOM05D007597 ORTHO05D009608 2.3e-30 136.3 111 63.1
Gohir.A04G143100 Gossypium hirsutum HOM05D007597 ORTHO05D009608 3.8e-30 135.6 109 61.5
arahy.Tifrunner.gnm1.ann1.80S20J Arachis hypogaea HOM05D007597 ORTHO05D009608 5.0e-30 135.2 116 58.6
Cfa015029 Carpinus fangiana HOM05D007597 ORTHO05D009608 8.6e-30 134.4 115 60.0
MD13G1019900 Malus domestica HOM05D007597 ORTHO05D009608 8.6e-30 134.4 117 59.0
EL10Ac1g02363 Beta vulgaris HOM05D007597 ORTHO05D009608 1.1e-29 134.0 111 57.7
Medtr1g032560 Medicago truncatula HOM05D007597 ORTHO05D009608 1.9e-29 133.3 116 56.0
Psat6g046800 Pisum sativum HOM05D007597 ORTHO05D009608 1.9e-29 133.3 123 56.9
MSTRG.13629 Avicennia marina HOM05D007597 ORTHO05D009608 2.5e-29 132.9 113 56.6
Ciclev10016899m.g Citrus clementina HOM05D007597 ORTHO05D009608 5.5e-29 131.7 116 56.9
HanXRQChr17g0550621 Helianthus annuus HOM05D007597 ORTHO05D009608 5.5e-29 131.7 144 50.7
CANSAT01G1232 Cannabis sativa HOM05D007597 ORTHO05D009608 1.2e-28 130.6 120 50.8
AUR62034992 Chenopodium quinoa HOM05D007597 ORTHO05D009608 1.2e-28 130.6 109 58.7
CSS0036739 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 4.7e-28 128.6 120 57.5
FAN17G0527 Fragaria x ananassa HOM05D007597 ORTHO05D009608 8.0e-28 127.9 112 58.0
Lalb_Chr10g0095671 Lupinus albus HOM05D007597 ORTHO05D009608 1.0e-27 127.5 114 55.3
Potri.008G135400 Populus trichocarpa HOM05D007597 ORTHO05D009608 1.0e-27 127.5 113 59.3
RcHm_v2.0_Chr4g0442791 Rosa chinensis HOM05D007597 ORTHO05D009608 1.0e-27 127.5 113 58.4
Aqoxy1G03694 Aquilegia oxysepala HOM05D007597 ORTHO05D009608 1.4e-27 127.1 124 52.4
Lsat_1_v5_gn_1_105200 Lactuca sativa HOM05D007597 ORTHO05D009608 1.4e-27 127.1 111 57.7
Prupe.1G334100 Prunus persica HOM05D007597 ORTHO05D009608 1.4e-27 127.1 96 61.5
TWI53G0585 Tripterygium wilfordii HOM05D007597 ORTHO05D009608 1.4e-27 127.1 123 52.0
PSO017G5208 Papaver somniferum HOM05D007597 ORTHO05D009608 1.8e-27 126.7 116 56.0
PSO478G0215 Papaver somniferum HOM05D007597 ORTHO05D009608 1.8e-27 126.7 116 56.9
Glyma.02G085800 Glycine max HOM05D007597 ORTHO05D009608 2.3e-27 126.3 132 49.2
FAN12G3867 Fragaria x ananassa HOM05D007597 ORTHO05D009608 3.0e-27 125.9 113 57.5
FvH4_4g33480 Fragaria vesca HOM05D007597 ORTHO05D009608 5.2e-27 125.2 113 56.6
vmacro08570 Vaccinium macrocarpon HOM05D007597 ORTHO05D009608 6.8e-27 124.8 113 59.3
FAN22G0955 Fragaria x ananassa HOM05D007597 ORTHO05D009608 8.8e-27 124.4 113 56.6
GSVIVG01011651001 Vitis vinifera HOM05D007597 ORTHO05D009608 8.8e-27 124.4 96 62.5
Thecc.02G293900 Theobroma cacao HOM05D007597 ORTHO05D009608 2.6e-26 122.9 96 61.5
Sabra08G0103400 Salix brachista HOM05D007597 ORTHO05D009608 7.5e-26 121.3 113 59.3
ClCG07G005520 Citrullus lanatus HOM05D007597 ORTHO05D009608 1.7e-25 120.2 110 54.5
SalBow2G2924 Salvia bowleyana HOM05D007597 ORTHO05D009608 2.2e-25 119.8 157 43.3
Cpa.g.sc2.188 Carica papaya HOM05D007597 ORTHO05D009608 3.7e-25 119.0 115 54.8
Migut.E00488 Erythranthe guttata HOM05D007597 ORTHO05D009608 6.3e-25 118.2 97 61.9
Zm00001eb216220 Zea mays HOM05D007597 ORTHO05D009608 8.3e-25 117.9 113 52.2
ATR0118G012 Amborella trichopoda HOM05D007597 ORTHO05D009608 2.4e-24 116.3 114 54.4
PGR142G2235 Punica granatum HOM05D007597 ORTHO05D009608 3.1e-24 115.9 146 48.6
CSS0009732 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 4.1e-24 115.5 89 62.9
DCAR_030495 Daucus carota HOM05D007597 ORTHO05D009608 4.1e-24 115.5 115 51.3
Eucgr.G02097 Eucalyptus grandis HOM05D007597 ORTHO05D009608 7.0e-24 114.8 120 52.5
Solyc03g006540.3 Solanum lycopersicum HOM05D007597 ORTHO05D009608 9.2e-24 114.4 120 50.0
PGSC0003DMG400026859 Solanum tuberosum HOM05D007597 ORTHO05D009608 1.2e-23 114.0 88 61.4
MELO3C016661.2 Cucumis melo HOM05D007597 ORTHO05D009608 1.6e-23 113.6 103 56.3
Os03g0713200 Oryza sativa ssp. japonica HOM05D007597 ORTHO05D009608 4.5e-23 112.1 92 58.7
Lj6P736T27 Lonicera japonica HOM05D007597 ORTHO05D009608 2.9e-22 109.4 83 59.0
Oeu031613.1 Olea europaea HOM05D007597 ORTHO05D009608 3.3e-21 105.9 84 57.1
Sopen03g002540 Solanum pennellii HOM05D007597 ORTHO05D009608 3.0e-19 99.4 76 60.5
AagrBONN_evm.TU.Sc2ySwM_228.3100 Anthoceros agrestis HOM05D007597 ORTHO05D009608 6.4e-17 91.7 87 49.4
Sed0011475 Sechium edule HOM05D007597 ORTHO05D009608 5.9e-15 85.1 100 51.0
CBR_g61471 Chara braunii HOM05D007597 ORTHO05D009608 7.3e-13 78.2 109 38.5
Pp3c16_25200 Physcomitrium patens HOM05D007597 ORTHO05D009608 3.1e-11 72.8 104 40.4
QL03p036112 Quercus lobata HOM05D007597 ORTHO05D009608 3.1e-11 72.8 96 45.8
COL.COLO4_16605 Corchorus olitorius HOM05D007597 ORTHO05D009608 1.5e-10 70.5 68 48.5
Nitab4.5_0006778g0040 Nicotiana tabacum HOM05D007597 ORTHO05D009608 2.0e-10 70.1 67 56.7
TAR371G0144 Trochodendron aralioides HOM05D007597 ORTHO05D009608 6.4e-09 65.1 105 40.0
Manes.17G084450 Manihot esculenta HOM05D007597 ORTHO05D000073 1.6e-07 60.5 39 74.4
Nitab4.5_0000241g0020 Nicotiana tabacum HOM05D007597 ORTHO05D009608 2.7e-07 59.7 43 67.4
SMO115G0274 Selaginella moellendorffii HOM05D007597 ORTHO05D009608 2.7e-07 59.7 93 39.8
FAN07G1480 Fragaria x ananassa HOM05D007597 ORTHO05D009608 1.7e-06 57.0 59 55.9
FAN07G2660 Fragaria x ananassa HOM05D007597 ORTHO05D009608 1.7e-06 57.0 59 55.9


User provided reference genes

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